RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 BNIP3LO60238 219 aa8.69□□□□□ -1.02
CPNE4-203ENST00000503204 PPP1R15AO75807 674 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-203ENST00000503204 STK32AQ8WU08 396 aa8.69□□□□□ -1.02
CPNE4-203ENST00000503204 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
CPNE4-203ENST00000503204 ABHD17AQ96GS6 310 aa8.69□□□□□ -1.02
CPNE4-203ENST00000503204 IGF1RP08069 1367 aa8.69□□□□□ -1.02
CPNE4-203ENST00000503204 LGR5O75473 907 aa8.68□□□□□ -1.02
CPNE4-203ENST00000503204 FAM157BP0CG42 384 aa8.68□□□□□ -1.02
CPNE4-203ENST00000503204 FGFR3P22607 806 aa8.68□□□□□ -1.02
CPNE4-203ENST00000503204 MAP2K3P46734 347 aa8.68□□□□□ -1.02
CPNE4-203ENST00000503204 ALDH16A1Q8IZ83 802 aa8.68□□□□□ -1.02
CPNE4-203ENST00000503204 ANKIB1Q9P2G1 1089 aa8.68□□□□□ -1.02
CPNE4-203ENST00000503204 FAM69CQ0P6D2 419 aa8.67□□□□□ -1.02
CPNE4-203ENST00000503204 HIF1AQ16665 826 aa8.67□□□□□ -1.02
CPNE4-203ENST00000503204 LRRC69Q6ZNQ3 347 aa8.67□□□□□ -1.02
CPNE4-203ENST00000503204 TNP2Q05952 138 aa8.66□□□□□ -1.02
CPNE4-203ENST00000503204 TMEM164Q5U3C3 297 aa8.66□□□□□ -1.02
CPNE4-203ENST00000503204 VTI1AQ96AJ9 217 aa8.66□□□□□ -1.02
CPNE4-203ENST00000503204 DCDC2BA2VCK2 349 aa8.65□□□□□ -1.02
CPNE4-203ENST00000503204 KHNYNO15037 678 aaKnown RBP8.65□□□□□ -1.02
CPNE4-203ENST00000503204 MAPTP10636 758 aaKnown RBP8.65□□□□□ -1.02
CPNE4-203ENST00000503204 BMP4P12644 408 aa8.65□□□□□ -1.02
CPNE4-203ENST00000503204 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
CPNE4-203ENST00000503204 RTN1Q16799 776 aa8.65□□□□□ -1.02
CPNE4-203ENST00000503204 FAM182BQ5T319 152 aa8.65□□□□□ -1.02
CPNE4-203ENST00000503204 ZNF385CQ66K41 422 aaPredicted RBP8.65□□□□□ -1.02
CPNE4-203ENST00000503204 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
CPNE4-203ENST00000503204 NGLY1Q96IV0 654 aa8.65□□□□□ -1.02
CPNE4-203ENST00000503204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.02
CPNE4-203ENST00000503204 EFSO43281 561 aa8.64□□□□□ -1.03
CPNE4-203ENST00000503204 MAP3K10Q02779 954 aa8.63□□□□□ -1.03
CPNE4-203ENST00000503204 WHAMMQ8TF30 809 aa8.63□□□□□ -1.03
CPNE4-203ENST00000503204 CLP1Q92989 425 aaKnown RBP8.63□□□□□ -1.03
CPNE4-203ENST00000503204 SUSD3Q96L08 255 aa8.63□□□□□ -1.03
CPNE4-203ENST00000503204 PRIMPOLQ96LW4 560 aa8.63□□□□□ -1.03
CPNE4-203ENST00000503204 LRRC4BQ9NT99 713 aa8.63□□□□□ -1.03
CPNE4-203ENST00000503204 SUPT5HO00267 1087 aaKnown RBP8.62□□□□□ -1.03
CPNE4-203ENST00000503204 PRMT3O60678 531 aa8.62□□□□□ -1.03
CPNE4-203ENST00000503204 CELA2BP08218 269 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-203ENST00000503204 CTBSQ01459 385 aa8.62□□□□□ -1.03
CPNE4-203ENST00000503204 OCLNQ16625 522 aa8.62□□□□□ -1.03
CPNE4-203ENST00000503204 LYPD4Q6UWN0 246 aa8.62□□□□□ -1.03
CPNE4-203ENST00000503204 ACDQ96AP0 544 aa8.62□□□□□ -1.03
CPNE4-203ENST00000503204 KLRG1Q96E93 195 aa8.62□□□□□ -1.03
CPNE4-203ENST00000503204 HSH2DQ96JZ2 352 aa8.62□□□□□ -1.03
CPNE4-203ENST00000503204 OXCT2Q9BYC2 517 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-203ENST00000503204 MARK1Q9P0L2 795 aa8.62□□□□□ -1.03
CPNE4-203ENST00000503204 BCRP11274 1271 aa8.61□□□□□ -1.03
CPNE4-203ENST00000503204 CD33P20138 364 aa8.61□□□□□ -1.03
CPNE4-203ENST00000503204 FKBP5Q13451 457 aaPredicted RBP8.61□□□□□ -1.03
CPNE4-203ENST00000503204 IER5Q5VY09 327 aa8.61□□□□□ -1.03
CPNE4-203ENST00000503204 GDF2Q9UK05 429 aaPredicted RBP8.61□□□□□ -1.03
CPNE4-203ENST00000503204 C2CD2LO14523 706 aa8.6□□□□□ -1.03
CPNE4-203ENST00000503204 GOLGA6L1Q8N7Z2 621 aa8.6□□□□□ -1.03
CPNE4-203ENST00000503204 ZNF280CQ8ND82 737 aa8.6□□□□□ -1.03
CPNE4-203ENST00000503204 MYO19Q96H55 970 aa8.6□□□□□ -1.03
CPNE4-203ENST00000503204 QTRT2Q9H974 415 aaKnown RBP8.6□□□□□ -1.03
CPNE4-203ENST00000503204 AVENQ9NQS1 362 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-203ENST00000503204 ENAMQ9NRM1 1142 aa8.6□□□□□ -1.03
CPNE4-203ENST00000503204 CXXC1Q9P0U4 656 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-203ENST00000503204 HCN2Q9UL51 889 aa8.6□□□□□ -1.03
CPNE4-203ENST00000503204 TGFBR3LH3BV60 316 aa8.59□□□□□ -1.03
CPNE4-203ENST00000503204 ARHGEF15O94989 841 aa8.59□□□□□ -1.03
CPNE4-203ENST00000503204 ARAFP10398 606 aa8.59□□□□□ -1.03
CPNE4-203ENST00000503204 TYRO3Q06418 890 aa8.59□□□□□ -1.03
CPNE4-203ENST00000503204 COL26A1Q96A83 441 aa8.59□□□□□ -1.03
CPNE4-203ENST00000503204 CEP63Q96MT8 703 aa8.59□□□□□ -1.03
CPNE4-203ENST00000503204 BRD7Q9NPI1 651 aa8.59□□□□□ -1.03
CPNE4-203ENST00000503204 OIP5O43482 229 aa8.58□□□□□ -1.04
CPNE4-203ENST00000503204 KCNQ4P56696 695 aa8.58□□□□□ -1.04
CPNE4-203ENST00000503204 BTLAQ7Z6A9 289 aa8.58□□□□□ -1.04
CPNE4-203ENST00000503204 STRN4Q9NRL3 753 aa8.58□□□□□ -1.04
CPNE4-203ENST00000503204 PTCD1O75127 700 aaKnown RBP8.57□□□□□ -1.04
CPNE4-203ENST00000503204 DGKZQ13574 1117 aa8.57□□□□□ -1.04
CPNE4-203ENST00000503204 SLCO4C1Q6ZQN7 724 aa8.57□□□□□ -1.04
CPNE4-203ENST00000503204 PRR12Q9ULL5 1215 aa8.57□□□□□ -1.04
CPNE4-203ENST00000503204 ADAMTS8Q9UP79 889 aa8.57□□□□□ -1.04
CPNE4-203ENST00000503204 ATP2B4P23634 1241 aa8.56□□□□□ -1.04
CPNE4-203ENST00000503204 SFSWAPQ12872 951 aaKnown RBP8.56□□□□□ -1.04
CPNE4-203ENST00000503204 C11orf91Q3C1V1 193 aa8.56□□□□□ -1.04
CPNE4-203ENST00000503204 ZNF468Q5VIY5 522 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-203ENST00000503204 KLK14Q9P0G3 267 aa8.56□□□□□ -1.04
CPNE4-203ENST00000503204 GGA1Q9UJY5 639 aa8.56□□□□□ -1.04
CPNE4-203ENST00000503204 KCNH4Q9UQ05 1017 aa8.56□□□□□ -1.04
CPNE4-203ENST00000503204 TMEM88BA6NKF7 163 aa8.55□□□□□ -1.04
CPNE4-203ENST00000503204 ADH6P28332 368 aa8.55□□□□□ -1.04
CPNE4-203ENST00000503204 ARID3AQ99856 593 aa8.55□□□□□ -1.04
CPNE4-203ENST00000503204 DMGDHQ9UI17 866 aaKnown RBP8.55□□□□□ -1.04
CPNE4-203ENST00000503204 BCS1LQ9Y276 419 aa8.55□□□□□ -1.04
CPNE4-203ENST00000503204 NEUROD1Q13562 356 aa8.54□□□□□ -1.04
CPNE4-203ENST00000503204 COX20Q5RI15 118 aa8.54□□□□□ -1.04
CPNE4-203ENST00000503204 GALNT6Q8NCL4 622 aa8.54□□□□□ -1.04
CPNE4-203ENST00000503204 NEDD1Q8NHV4 660 aa8.54□□□□□ -1.04
CPNE4-203ENST00000503204 MKNK1Q9BUB5 465 aa8.54□□□□□ -1.04
CPNE4-203ENST00000503204 SLAIN2Q9P270 581 aa8.54□□□□□ -1.04
CPNE4-203ENST00000503204 LRFN2Q9ULH4 789 aa8.54□□□□□ -1.04
CPNE4-203ENST00000503204 DNMT3AQ9Y6K1 912 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-203ENST00000503204 NEURL1BA8MQ27 555 aa8.53□□□□□ -1.04
CPNE4-203ENST00000503204 EPB42P16452 691 aa8.53□□□□□ -1.04
CPNE4-203ENST00000503204 MARSP56192 900 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms