RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 TBC1D2BQ9UPU7 963 aa14.3□□□□□ -0.12
SNCA-207ENST00000502987 SIPA1L3O60292 1781 aaPredicted RBP14.29□□□□□ -0.12
SNCA-207ENST00000502987 A1BGP04217 495 aa14.29□□□□□ -0.12
SNCA-207ENST00000502987 NEFMP07197 916 aa14.29□□□□□ -0.12
SNCA-207ENST00000502987 KCNQ3O43525 872 aa14.28□□□□□ -0.12
SNCA-207ENST00000502987 TBC1D9BQ66K14 1250 aa14.28□□□□□ -0.12
SNCA-207ENST00000502987 MCM10Q7L590 875 aa14.28□□□□□ -0.12
SNCA-207ENST00000502987 TTLL6Q8N841 843 aa14.28□□□□□ -0.12
SNCA-207ENST00000502987 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
SNCA-207ENST00000502987 NMRK2Q9NPI5 230 aa14.28□□□□□ -0.12
SNCA-207ENST00000502987 KDM2BQ8NHM5 1336 aa14.27□□□□□ -0.12
SNCA-207ENST00000502987 TOMM70O94826 608 aa14.27□□□□□ -0.13
SNCA-207ENST00000502987 IL6STP40189 918 aaPredicted RBP14.27□□□□□ -0.13
SNCA-207ENST00000502987 ZNF622Q969S3 477 aaKnown RBP eCLIP14.27□□□□□ -0.13
SNCA-207ENST00000502987 SBF1O95248 1867 aa14.27□□□□□ -0.13
SNCA-207ENST00000502987 DCTN1Q14203 1278 aa14.26□□□□□ -0.13
SNCA-207ENST00000502987 CCDC24Q8N4L8 307 aa14.26□□□□□ -0.13
SNCA-207ENST00000502987 SETDB2Q96T68 719 aa14.26□□□□□ -0.13
SNCA-207ENST00000502987 CCDC88AQ3V6T2 1871 aa14.26□□□□□ -0.13
SNCA-207ENST00000502987 CEMIPQ8WUJ3 1361 aa14.25□□□□□ -0.13
SNCA-207ENST00000502987 NRXN2Q9P2S2 1712 aa14.25□□□□□ -0.13
SNCA-207ENST00000502987 PDE6BP35913 854 aa14.25□□□□□ -0.13
SNCA-207ENST00000502987 PIP4K2AP48426 406 aaPredicted RBP14.25□□□□□ -0.13
SNCA-207ENST00000502987 RASSF7Q02833 373 aa14.25□□□□□ -0.13
SNCA-207ENST00000502987 DZIP3Q86Y13 1208 aaKnown RBP14.25□□□□□ -0.13
SNCA-207ENST00000502987 USP16Q9Y5T5 823 aa14.25□□□□□ -0.13
SNCA-207ENST00000502987 SNRPA1P09661 255 aaKnown RBP14.24□□□□□ -0.13
SNCA-207ENST00000502987 RRAGCQ9HB90 399 aa14.24□□□□□ -0.13
SNCA-207ENST00000502987 CARMIL3Q8ND23 1372 aa14.23□□□□□ -0.13
SNCA-207ENST00000502987 PRAMEF22A3QJZ6 481 aa14.23□□□□□ -0.13
SNCA-207ENST00000502987 LMNB1P20700 586 aa14.23□□□□□ -0.13
SNCA-207ENST00000502987 ST5P78524 1137 aa14.23□□□□□ -0.13
SNCA-207ENST00000502987 TAF7Q15545 349 aaPredicted RBP14.23□□□□□ -0.13
SNCA-207ENST00000502987 CNBD1Q8NA66 436 aa14.23□□□□□ -0.13
SNCA-207ENST00000502987 BRIP1Q9BX63 1249 aa14.23□□□□□ -0.13
SNCA-207ENST00000502987 PDZRN3Q9UPQ7 1066 aa14.23□□□□□ -0.13
SNCA-207ENST00000502987 DLEC1Q9Y238 1755 aa14.22□□□□□ -0.13
SNCA-207ENST00000502987 HTATSF1O43719 755 aaKnown RBP14.22□□□□□ -0.13
SNCA-207ENST00000502987 CAMTA2O94983 1202 aa14.22□□□□□ -0.13
SNCA-207ENST00000502987 APLP1P51693 650 aa14.22□□□□□ -0.13
SNCA-207ENST00000502987 PRR5LQ6MZQ0 368 aa14.22□□□□□ -0.13
SNCA-207ENST00000502987 MIS18AQ9NYP9 233 aa14.22□□□□□ -0.13
SNCA-207ENST00000502987 SCN7AQ01118 1682 aa14.21□□□□□ -0.13
SNCA-207ENST00000502987 GALR2O43603 387 aaPredicted RBP14.21□□□□□ -0.13
SNCA-207ENST00000502987 C21orf2O43822 256 aa14.21□□□□□ -0.13
SNCA-207ENST00000502987 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.13
SNCA-207ENST00000502987 CACNA1SQ13698 1873 aa14.21□□□□□ -0.14
SNCA-207ENST00000502987 ANKRD31Q8N7Z5 1873 aa14.21□□□□□ -0.14
SNCA-207ENST00000502987 DLG5Q8TDM6 1919 aa14.2□□□□□ -0.14
SNCA-207ENST00000502987 FAM177BA6PVY3 158 aa14.2□□□□□ -0.14
SNCA-207ENST00000502987 NBPF5PQ86XG9 351 aaPredicted RBP14.2□□□□□ -0.14
SNCA-207ENST00000502987 RBM46Q8TBY0 533 aaKnown RBP14.2□□□□□ -0.14
SNCA-207ENST00000502987 PNNQ9H307 717 aaKnown RBP14.2□□□□□ -0.14
SNCA-207ENST00000502987 NGEFQ8N5V2 710 aa14.19□□□□□ -0.14
SNCA-207ENST00000502987 MAPK8IP3Q9UPT6 1336 aa14.18□□□□□ -0.14
SNCA-207ENST00000502987 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
SNCA-207ENST00000502987 MNX1P50219 401 aaPredicted RBP14.18□□□□□ -0.14
SNCA-207ENST00000502987 CLEC4GQ6UXB4 293 aa14.18□□□□□ -0.14
SNCA-207ENST00000502987 CNKSR1Q969H4 720 aa14.18□□□□□ -0.14
SNCA-207ENST00000502987 NIP7Q9Y221 180 aaKnown RBP eCLIP14.18□□□□□ -0.14
SNCA-207ENST00000502987 ZC3H4Q9UPT8 1303 aaKnown RBP14.17□□□□□ -0.14
SNCA-207ENST00000502987 TNRC6CQ9HCJ0 1690 aaKnown RBP14.17□□□□□ -0.14
SNCA-207ENST00000502987 BCORQ6W2J9 1755 aa14.17□□□□□ -0.14
SNCA-207ENST00000502987 GLTPD2A6NH11 291 aa14.17□□□□□ -0.14
SNCA-207ENST00000502987 NFKBIEO00221 500 aa14.17□□□□□ -0.14
SNCA-207ENST00000502987 VEGFAP15692 232 aaPredicted RBP14.17□□□□□ -0.14
SNCA-207ENST00000502987 FSTL1Q12841 308 aa14.17□□□□□ -0.14
SNCA-207ENST00000502987 DPY19L2Q6NUT2 758 aa14.17□□□□□ -0.14
SNCA-207ENST00000502987 TPTE2Q6XPS3 522 aa14.17□□□□□ -0.14
SNCA-207ENST00000502987 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
SNCA-207ENST00000502987 PHF12Q96QT6 1004 aa14.17□□□□□ -0.14
SNCA-207ENST00000502987 NBPF26B4DH59 902 aa14.16□□□□□ -0.14
SNCA-207ENST00000502987 PRELPP51888 382 aa14.16□□□□□ -0.14
SNCA-207ENST00000502987 NFE2L2Q16236 605 aa14.16□□□□□ -0.14
SNCA-207ENST00000502987 ERFEQ4G0M1 354 aa14.16□□□□□ -0.14
SNCA-207ENST00000502987 STYK1Q6J9G0 422 aa14.16□□□□□ -0.14
SNCA-207ENST00000502987 NBPF10Q6P3W6 841 aaKnown RBP14.16□□□□□ -0.14
SNCA-207ENST00000502987 NBPF15Q8N660 670 aa14.16□□□□□ -0.14
SNCA-207ENST00000502987 MASTLQ96GX5 879 aa14.16□□□□□ -0.14
SNCA-207ENST00000502987 RRP7AQ9Y3A4 280 aaKnown RBP14.16□□□□□ -0.14
SNCA-207ENST00000502987 COL11A2P13942 1736 aaPredicted RBP14.15□□□□□ -0.14
SNCA-207ENST00000502987 TIAM2Q8IVF5 1701 aa14.15□□□□□ -0.14
SNCA-207ENST00000502987 SRGNP10124 158 aa14.15□□□□□ -0.14
SNCA-207ENST00000502987 PRPF40BQ6NWY9 871 aaKnown RBP14.15□□□□□ -0.14
SNCA-207ENST00000502987 THUMPD2Q9BTF0 503 aaKnown RBP14.15□□□□□ -0.14
SNCA-207ENST00000502987 SLX4Q8IY92 1834 aa14.15□□□□□ -0.14
SNCA-207ENST00000502987 DICER1Q9UPY3 1922 aaKnown RBP14.14□□□□□ -0.15
SNCA-207ENST00000502987 MYL6BP14649 208 aa14.14□□□□□ -0.15
SNCA-207ENST00000502987 SOGA3Q5TF21 947 aa14.14□□□□□ -0.15
SNCA-207ENST00000502987 SMC1BQ8NDV3 1235 aa14.14□□□□□ -0.15
SNCA-207ENST00000502987 TAOK3Q9H2K8 898 aa14.14□□□□□ -0.15
SNCA-207ENST00000502987 FER1L6Q2WGJ9 1857 aa14.14□□□□□ -0.15
SNCA-207ENST00000502987 NPR1P16066 1061 aa14.13□□□□□ -0.15
SNCA-207ENST00000502987 HTRA3P83110 453 aa14.13□□□□□ -0.15
SNCA-207ENST00000502987 HLFQ16534 295 aa14.13□□□□□ -0.15
SNCA-207ENST00000502987 KIF6Q6ZMV9 814 aa14.13□□□□□ -0.15
SNCA-207ENST00000502987 PLEKHF1Q96S99 279 aa14.13□□□□□ -0.15
SNCA-207ENST00000502987 WDR90Q96KV7 1748 aa14.12□□□□□ -0.15
SNCA-207ENST00000502987 EIF4A1P60842 406 aaKnown RBP14.12□□□□□ -0.15
SNCA-207ENST00000502987 DNAJC5GQ8N7S2 189 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms