RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 KIF6Q6ZMV9 814 aa16.96■□□□□ 0.3
SGCA-203ENST00000502555 PELP1Q8IZL8 1130 aaKnown RBP16.96■□□□□ 0.3
SGCA-203ENST00000502555 GNAI2P04899 355 aa16.95■□□□□ 0.3
SGCA-203ENST00000502555 INTS5Q6P9B9 1019 aaKnown RBP16.95■□□□□ 0.3
SGCA-203ENST00000502555 TTLL7Q6ZT98 887 aa16.95■□□□□ 0.3
SGCA-203ENST00000502555 USP44Q9H0E7 712 aa16.95■□□□□ 0.3
SGCA-203ENST00000502555 HDAC5Q9UQL6 1122 aa16.95■□□□□ 0.3
SGCA-203ENST00000502555 CNTNAP4Q9C0A0 1308 aa16.94■□□□□ 0.3
SGCA-203ENST00000502555 SOCS7O14512 581 aa16.94■□□□□ 0.3
SGCA-203ENST00000502555 IGHDP01880 384 aa16.94■□□□□ 0.3
SGCA-203ENST00000502555 UBTFL1P0CB47 393 aaPredicted RBP16.94■□□□□ 0.3
SGCA-203ENST00000502555 ILDR2Q71H61 639 aa16.94■□□□□ 0.3
SGCA-203ENST00000502555 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
SGCA-203ENST00000502555 RPAP2Q8IXW5 612 aaPredicted RBP16.94■□□□□ 0.3
SGCA-203ENST00000502555 C1orf115Q9H7X2 142 aa16.94■□□□□ 0.3
SGCA-203ENST00000502555 CCNL1Q9UK58 526 aaPredicted RBP16.94■□□□□ 0.3
SGCA-203ENST00000502555 COL5A3P25940 1745 aaPredicted RBP16.93■□□□□ 0.3
SGCA-203ENST00000502555 LY75O60449 1722 aa16.93■□□□□ 0.3
SGCA-203ENST00000502555 NEURL1BA8MQ27 555 aa16.93■□□□□ 0.3
SGCA-203ENST00000502555 IGKV5-2P06315 115 aa16.93■□□□□ 0.3
SGCA-203ENST00000502555 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
SGCA-203ENST00000502555 ANKRD44Q8N8A2 993 aa16.93■□□□□ 0.3
SGCA-203ENST00000502555 LINC00116Q8NCU8 138 aa16.93■□□□□ 0.3
SGCA-203ENST00000502555 MYD88Q99836 296 aa16.93■□□□□ 0.3
SGCA-203ENST00000502555 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
SGCA-203ENST00000502555 UTYO14607 1347 aa16.92■□□□□ 0.3
SGCA-203ENST00000502555 MAP3K15Q6ZN16 1313 aa16.92■□□□□ 0.3
SGCA-203ENST00000502555 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
SGCA-203ENST00000502555 CWF19L2Q2TBE0 894 aaKnown RBP16.92■□□□□ 0.3
SGCA-203ENST00000502555 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
SGCA-203ENST00000502555 CEP85Q6P2H3 762 aa16.92■□□□□ 0.3
SGCA-203ENST00000502555 ZNF330Q9Y3S2 320 aaPredicted RBP16.92■□□□□ 0.3
SGCA-203ENST00000502555 NUP188Q5SRE5 1749 aa16.91■□□□□ 0.3
SGCA-203ENST00000502555 ERVV-1B6SEH8 477 aa16.91■□□□□ 0.3
SGCA-203ENST00000502555 GRM8O00222 908 aa16.91■□□□□ 0.3
SGCA-203ENST00000502555 TRIM37O94972 964 aa16.91■□□□□ 0.3
SGCA-203ENST00000502555 ZBTB3Q9H5J0 574 aa16.91■□□□□ 0.3
SGCA-203ENST00000502555 C9orf78Q9NZ63 289 aaPredicted RBP16.91■□□□□ 0.3
SGCA-203ENST00000502555 HMMRO75330 724 aa16.9■□□□□ 0.3
SGCA-203ENST00000502555 GCKRQ14397 625 aa16.9■□□□□ 0.3
SGCA-203ENST00000502555 HSP90AB3PQ58FF7 597 aa16.9■□□□□ 0.3
SGCA-203ENST00000502555 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
SGCA-203ENST00000502555 DZIP3Q86Y13 1208 aaKnown RBP16.9■□□□□ 0.3
SGCA-203ENST00000502555 A0A087WZG4 1122 aa16.89■□□□□ 0.29
SGCA-203ENST00000502555 NBPF7P0C2Y1 421 aaPredicted RBP16.89■□□□□ 0.29
SGCA-203ENST00000502555 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
SGCA-203ENST00000502555 SIRT2Q8IXJ6 389 aa16.89■□□□□ 0.29
SGCA-203ENST00000502555 SMC5Q8IY18 1101 aa16.89■□□□□ 0.29
SGCA-203ENST00000502555 LRRFIP2Q9Y608 721 aaKnown RBP16.89■□□□□ 0.29
SGCA-203ENST00000502555 COL15A1P39059 1388 aa16.88■□□□□ 0.29
SGCA-203ENST00000502555 RGL2O15211 777 aa16.88■□□□□ 0.29
SGCA-203ENST00000502555 TCIRG1Q13488 830 aa16.88■□□□□ 0.29
SGCA-203ENST00000502555 GIGYF2Q6Y7W6 1299 aaKnown RBP16.88■□□□□ 0.29
SGCA-203ENST00000502555 CCDC191Q8NCU4 936 aa16.88■□□□□ 0.29
SGCA-203ENST00000502555 GCC1Q96CN9 775 aa16.88■□□□□ 0.29
SGCA-203ENST00000502555 ISCA1Q9BUE6 129 aa16.88■□□□□ 0.29
SGCA-203ENST00000502555 CWC25Q9NXE8 425 aaPredicted RBP16.87■□□□□ 0.29
SGCA-203ENST00000502555 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
SGCA-203ENST00000502555 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
SGCA-203ENST00000502555 PLSCR1O15162 318 aa16.85■□□□□ 0.29
SGCA-203ENST00000502555 KCNQ4P56696 695 aa16.85■□□□□ 0.29
SGCA-203ENST00000502555 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
SGCA-203ENST00000502555 MTX1Q13505 466 aa16.85■□□□□ 0.29
SGCA-203ENST00000502555 ARXQ96QS3 562 aa16.85■□□□□ 0.29
SGCA-203ENST00000502555 MYH14Q7Z406 1995 aaKnown RBP16.84■□□□□ 0.29
SGCA-203ENST00000502555 GNPATO15228 680 aa16.84■□□□□ 0.29
SGCA-203ENST00000502555 CAMTA2O94983 1202 aa16.84■□□□□ 0.29
SGCA-203ENST00000502555 TBC1D2BQ9UPU7 963 aa16.84■□□□□ 0.29
SGCA-203ENST00000502555 ZNF652Q9Y2D9 606 aa16.84■□□□□ 0.29
SGCA-203ENST00000502555 C4BP0C0L5 1744 aa16.84■□□□□ 0.29
SGCA-203ENST00000502555 H7C1W4 665 aa16.83■□□□□ 0.28
SGCA-203ENST00000502555 HLFQ16534 295 aa16.83■□□□□ 0.28
SGCA-203ENST00000502555 SUCLG2Q96I99 432 aa16.83■□□□□ 0.28
SGCA-203ENST00000502555 DCTPP1Q9H773 170 aa16.83■□□□□ 0.28
SGCA-203ENST00000502555 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
SGCA-203ENST00000502555 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
SGCA-203ENST00000502555 APBA3O96018 575 aa16.82■□□□□ 0.28
SGCA-203ENST00000502555 ADRA2BP18089 450 aa16.82■□□□□ 0.28
SGCA-203ENST00000502555 CASP7P55210 303 aa16.82■□□□□ 0.28
SGCA-203ENST00000502555 TXNRD1Q16881 649 aa16.82■□□□□ 0.28
SGCA-203ENST00000502555 UBE3BQ7Z3V4 1068 aa16.82■□□□□ 0.28
SGCA-203ENST00000502555 SSH3Q8TE77 659 aa16.82■□□□□ 0.28
SGCA-203ENST00000502555 AK7Q96M32 723 aa16.82■□□□□ 0.28
SGCA-203ENST00000502555 TAF1LQ8IZX4 1826 aa16.82■□□□□ 0.28
SGCA-203ENST00000502555 AFDNP55196 1824 aaKnown RBP16.81■□□□□ 0.28
SGCA-203ENST00000502555 POLA2Q14181 598 aa16.81■□□□□ 0.28
SGCA-203ENST00000502555 CLEC4GQ6UXB4 293 aa16.81■□□□□ 0.28
SGCA-203ENST00000502555 PPP1R42Q7Z4L9 355 aa16.81■□□□□ 0.28
SGCA-203ENST00000502555 NLRP10Q86W26 655 aa16.81■□□□□ 0.28
SGCA-203ENST00000502555 ZNF34Q8IZ26 560 aa16.81■□□□□ 0.28
SGCA-203ENST00000502555 PDZRN3Q9UPQ7 1066 aa16.81■□□□□ 0.28
SGCA-203ENST00000502555 RGPD3A6NKT7 1758 aaPredicted RBP16.8■□□□□ 0.28
SGCA-203ENST00000502555 RGPD4Q7Z3J3 1758 aa16.8■□□□□ 0.28
SGCA-203ENST00000502555 PNMA6EA0A0J9YXQ4 647 aa16.8■□□□□ 0.28
SGCA-203ENST00000502555 SRGAP3O43295 1099 aa16.8■□□□□ 0.28
SGCA-203ENST00000502555 PCCAP05165 728 aaPredicted RBP16.8■□□□□ 0.28
SGCA-203ENST00000502555 NUCB1Q02818 461 aa16.8■□□□□ 0.28
SGCA-203ENST00000502555 ZBTB38Q8NAP3 1195 aaPredicted RBP16.8■□□□□ 0.28
SGCA-203ENST00000502555 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
SGCA-203ENST00000502555 TNS1Q9HBL0 1735 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms