RNA–Protein interactions for RNA: ENST00000502350.5

SH3TC1-204, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 2,258 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-204ENST00000502350 CCDC30Q5VVM6 783 aa17.32■□□□□ 0.36
SH3TC1-204ENST00000502350 ATG3Q9NT62 314 aa17.32■□□□□ 0.36
SH3TC1-204ENST00000502350 SOS1Q07889 1333 aaPredicted RBP17.32■□□□□ 0.36
SH3TC1-204ENST00000502350 HOXB7P09629 217 aa17.32■□□□□ 0.36
SH3TC1-204ENST00000502350 FLIIQ13045 1269 aa17.32■□□□□ 0.36
SH3TC1-204ENST00000502350 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
SH3TC1-204ENST00000502350 FKBP5Q13451 457 aaPredicted RBP17.31■□□□□ 0.36
SH3TC1-204ENST00000502350 CACNA1FO60840 1977 aa17.3■□□□□ 0.36
SH3TC1-204ENST00000502350 K7ELQ4 463 aaPredicted RBP17.3■□□□□ 0.36
SH3TC1-204ENST00000502350 SNRPA1P09661 255 aaKnown RBP17.3■□□□□ 0.36
SH3TC1-204ENST00000502350 USP26Q9BXU7 913 aa17.3■□□□□ 0.36
SH3TC1-204ENST00000502350 GZF1Q9H116 711 aaPredicted RBP17.3■□□□□ 0.36
SH3TC1-204ENST00000502350 HMMRO75330 724 aa17.29■□□□□ 0.36
SH3TC1-204ENST00000502350 PTF1AQ7RTS3 328 aa17.29■□□□□ 0.36
SH3TC1-204ENST00000502350 TNPO1Q92973 898 aaKnown RBP17.29■□□□□ 0.36
SH3TC1-204ENST00000502350 PHAXQ9H814 394 aaKnown RBP17.29■□□□□ 0.36
SH3TC1-204ENST00000502350 EXOC6BQ9Y2D4 811 aa17.29■□□□□ 0.36
SH3TC1-204ENST00000502350 TRAK2O60296 914 aa17.28■□□□□ 0.36
SH3TC1-204ENST00000502350 GNAI2P04899 355 aa17.28■□□□□ 0.36
SH3TC1-204ENST00000502350 ANO8Q9HCE9 1232 aaPredicted RBP17.28■□□□□ 0.36
SH3TC1-204ENST00000502350 ANXA1P04083 346 aa17.28■□□□□ 0.36
SH3TC1-204ENST00000502350 EP400Q96L91 3159 aa17.28■□□□□ 0.36
SH3TC1-204ENST00000502350 TJP1Q07157 1748 aa17.27■□□□□ 0.36
SH3TC1-204ENST00000502350 CHPF2Q9P2E5 772 aa17.27■□□□□ 0.36
SH3TC1-204ENST00000502350 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
SH3TC1-204ENST00000502350 PALLDQ8WX93 1383 aa17.27■□□□□ 0.36
SH3TC1-204ENST00000502350 PNMA6EA0A0J9YXQ4 647 aa17.27■□□□□ 0.35
SH3TC1-204ENST00000502350 FAM196AQ6ZSG2 479 aa17.27■□□□□ 0.35
SH3TC1-204ENST00000502350 HSP90AA1P07900 732 aaKnown RBP17.26■□□□□ 0.35
SH3TC1-204ENST00000502350 RAB3GAP1Q15042 981 aa17.26■□□□□ 0.35
SH3TC1-204ENST00000502350 PDE1AP54750 535 aa17.26■□□□□ 0.35
SH3TC1-204ENST00000502350 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
SH3TC1-204ENST00000502350 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
SH3TC1-204ENST00000502350 CIZ1Q9ULV3 898 aaPredicted RBP17.26■□□□□ 0.35
SH3TC1-204ENST00000502350 AK9Q5TCS8 1911 aa17.25■□□□□ 0.35
SH3TC1-204ENST00000502350 ARXQ96QS3 562 aa17.25■□□□□ 0.35
SH3TC1-204ENST00000502350 OSBPL3Q9H4L5 887 aa17.24■□□□□ 0.35
SH3TC1-204ENST00000502350 DBF4Q9UBU7 674 aaPredicted RBP17.24■□□□□ 0.35
SH3TC1-204ENST00000502350 GNAI3P08754 354 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 PIP4K2AP48426 406 aaPredicted RBP17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 RABEP1Q15276 862 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 DNAJC10Q8IXB1 793 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 SMARCC1Q92922 1105 aaPredicted RBP17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 SLC4A9Q96Q91 983 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 SALL3Q9BXA9 1300 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 N4BP2Q86UW6 1770 aaPredicted RBP17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 DDX11L8A8MPP1 907 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 ATP8B2P98198 1209 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 USP44Q9H0E7 712 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 LRRFIP2Q9Y608 721 aaKnown RBP17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 TUBGCP6Q96RT7 1819 aa17.23■□□□□ 0.35
SH3TC1-204ENST00000502350 TRIM37O94972 964 aa17.22■□□□□ 0.35
SH3TC1-204ENST00000502350 MYL6BP14649 208 aa17.22■□□□□ 0.35
SH3TC1-204ENST00000502350 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
SH3TC1-204ENST00000502350 LY75O60449 1722 aa17.22■□□□□ 0.35
SH3TC1-204ENST00000502350 LOC102724428A0A0B4J2F2 783 aa17.22■□□□□ 0.35
SH3TC1-204ENST00000502350 SIK1P57059 783 aa17.22■□□□□ 0.35
SH3TC1-204ENST00000502350 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
SH3TC1-204ENST00000502350 FSD2A1L4K1 749 aa17.21■□□□□ 0.35
SH3TC1-204ENST00000502350 EIF5BO60841 1220 aaKnown RBP17.21■□□□□ 0.35
SH3TC1-204ENST00000502350 ATP6V1AP38606 617 aa17.21■□□□□ 0.35
SH3TC1-204ENST00000502350 LRRCC1Q9C099 1032 aa17.21■□□□□ 0.35
SH3TC1-204ENST00000502350 CICQ96RK0 1608 aaPredicted RBP17.21■□□□□ 0.35
SH3TC1-204ENST00000502350 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.34
SH3TC1-204ENST00000502350 TEX13AQ9BXU3 409 aaPredicted RBP17.21■□□□□ 0.34
SH3TC1-204ENST00000502350 DDX21Q9NR30 783 aaKnown RBP eCLIP17.21■□□□□ 0.34
SH3TC1-204ENST00000502350 COL5A3P25940 1745 aaPredicted RBP17.2■□□□□ 0.34
SH3TC1-204ENST00000502350 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
SH3TC1-204ENST00000502350 SSFA2P28290 1259 aa17.2■□□□□ 0.34
SH3TC1-204ENST00000502350 PDIA6Q15084 440 aa17.2■□□□□ 0.34
SH3TC1-204ENST00000502350 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
SH3TC1-204ENST00000502350 GOLGA6L3A6NEY3 463 aa17.19■□□□□ 0.34
SH3TC1-204ENST00000502350 A1BGP04217 495 aa17.19■□□□□ 0.34
SH3TC1-204ENST00000502350 XRCC6P12956 609 aaKnown RBP eCLIP17.19■□□□□ 0.34
SH3TC1-204ENST00000502350 ERC2O15083 957 aa17.19■□□□□ 0.34
SH3TC1-204ENST00000502350 STARD3NLO95772 234 aa17.19■□□□□ 0.34
SH3TC1-204ENST00000502350 HYPKQ9NX55 129 aa17.19■□□□□ 0.34
SH3TC1-204ENST00000502350 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
SH3TC1-204ENST00000502350 REC8O95072 547 aa17.18■□□□□ 0.34
SH3TC1-204ENST00000502350 MX1P20591 662 aa17.18■□□□□ 0.34
SH3TC1-204ENST00000502350 KCNQ4P56696 695 aa17.18■□□□□ 0.34
SH3TC1-204ENST00000502350 GBP4Q96PP9 640 aa17.18■□□□□ 0.34
SH3TC1-204ENST00000502350 PI4KAP2A4QPH2 592 aa17.18■□□□□ 0.34
SH3TC1-204ENST00000502350 AIMP1Q12904 312 aaKnown RBP17.18■□□□□ 0.34
SH3TC1-204ENST00000502350 PI4KAP1Q8N8J0 262 aa17.18■□□□□ 0.34
SH3TC1-204ENST00000502350 NBPF26B4DH59 902 aa17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 UBTFL1P0CB47 393 aaPredicted RBP17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 ITPK1Q13572 414 aa17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 NBPF14Q5TI25 921 aa17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 NBPF10Q6P3W6 841 aaKnown RBP17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 NBPF15Q8N660 670 aa17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 ZNF330Q9Y3S2 320 aaPredicted RBP17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 ERBB4Q15303 1308 aa17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 TNS1Q9HBL0 1735 aaKnown RBP17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 TAF1LQ8IZX4 1826 aa17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 CYP19A1P11511 503 aaPredicted RBP17.17■□□□□ 0.34
SH3TC1-204ENST00000502350 PRKCSHP14314 528 aaPredicted RBP17.16■□□□□ 0.34
SH3TC1-204ENST00000502350 PANK2Q9BZ23 570 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms