RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	DNAAF4	Q8WXU2	420 aa		28.21	■■■□□ 2.11
RAP1B-213	ENST00000501412	ARFGEF2	Q9Y6D5	1785 aa		28.21	■■■□□ 2.11
RAP1B-213	ENST00000501412	ANKRD13D	Q6ZTN6	518 aa		28.21	■■■□□ 2.11
RAP1B-213	ENST00000501412	MAP3K2	Q9Y2U5	619 aa		28.21	■■■□□ 2.11
RAP1B-213	ENST00000501412	ATP10D	Q9P241	1426 aa		28.2	■■■□□ 2.1
RAP1B-213	ENST00000501412	PLBD2	Q8NHP8	589 aa		28.2	■■■□□ 2.1
RAP1B-213	ENST00000501412	ITPRIP	Q8IWB1	547 aa		28.19	■■■□□ 2.1
RAP1B-213	ENST00000501412	BEND3	Q5T5X7	828 aa		28.18	■■■□□ 2.1
RAP1B-213	ENST00000501412	SLC4A10	Q6U841	1118 aa		28.18	■■■□□ 2.1
RAP1B-213	ENST00000501412	CCT4	P50991	539 aa	Known RBP	28.17	■■■□□ 2.1
RAP1B-213	ENST00000501412	RIC3	Q7Z5B4	369 aa		28.16	■■■□□ 2.1
RAP1B-213	ENST00000501412	CAMKK2	Q96RR4	588 aa		28.16	■■■□□ 2.1
RAP1B-213	ENST00000501412	DDX19B	Q9UMR2	479 aa		28.16	■■■□□ 2.1
RAP1B-213	ENST00000501412	RPS6KA4	O75676	772 aa		28.15	■■■□□ 2.1
RAP1B-213	ENST00000501412	BAG6	P46379	1132 aa		28.15	■■■□□ 2.1
RAP1B-213	ENST00000501412	METTL22	Q9BUU2	404 aa	Predicted RBP	28.15	■■■□□ 2.1
RAP1B-213	ENST00000501412	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.15	■■■□□ 2.1
RAP1B-213	ENST00000501412	COL15A1	P39059	1388 aa		28.15	■■■□□ 2.1
RAP1B-213	ENST00000501412	AMIGO3	Q86WK7	504 aa		28.15	■■■□□ 2.1
RAP1B-213	ENST00000501412	UBR3	Q6ZT12	1888 aa		28.14	■■■□□ 2.1
RAP1B-213	ENST00000501412	MAP3K15	Q6ZN16	1313 aa		28.14	■■■□□ 2.1
RAP1B-213	ENST00000501412	ZBTB7B	O15156	539 aa	Predicted RBP	28.14	■■■□□ 2.09
RAP1B-213	ENST00000501412	GNPAT	O15228	680 aa		28.13	■■■□□ 2.09
RAP1B-213	ENST00000501412	ZBTB3	Q9H5J0	574 aa		28.13	■■■□□ 2.09
RAP1B-213	ENST00000501412	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.13	■■■□□ 2.09
RAP1B-213	ENST00000501412	IGKV5-2	P06315	115 aa		28.12	■■■□□ 2.09
RAP1B-213	ENST00000501412	KIF6	Q6ZMV9	814 aa		28.12	■■■□□ 2.09
RAP1B-213	ENST00000501412	DZIP3	Q86Y13	1208 aa	Known RBP	28.12	■■■□□ 2.09
RAP1B-213	ENST00000501412	BCOR	Q6W2J9	1755 aa		28.11	■■■□□ 2.09
RAP1B-213	ENST00000501412	ERVV-1	B6SEH8	477 aa		28.11	■■■□□ 2.09
RAP1B-213	ENST00000501412	HMGB2	P26583	209 aa	Known RBP	28.11	■■■□□ 2.09
RAP1B-213	ENST00000501412	EN1	Q05925	392 aa	Predicted RBP	28.11	■■■□□ 2.09
RAP1B-213	ENST00000501412	LINS1	Q8NG48	757 aa		28.11	■■■□□ 2.09
RAP1B-213	ENST00000501412	SRCIN1	Q9C0H9	1055 aa		28.11	■■■□□ 2.09
RAP1B-213	ENST00000501412	ZBTB40	Q9NUA8	1239 aa		28.11	■■■□□ 2.09
RAP1B-213	ENST00000501412	TBC1D2B	Q9UPU7	963 aa		28.1	■■■□□ 2.09
RAP1B-213	ENST00000501412	ALDH1L1	O75891	902 aa		28.09	■■■□□ 2.09
RAP1B-213	ENST00000501412	CAMTA2	O94983	1202 aa		28.09	■■■□□ 2.09
RAP1B-213	ENST00000501412	AAMP	Q13685	434 aa		28.09	■■■□□ 2.09
RAP1B-213	ENST00000501412	EZH2	Q15910	746 aa	Known RBP	28.09	■■■□□ 2.09
RAP1B-213	ENST00000501412	SMIM5	Q71RC9	77 aa		28.09	■■■□□ 2.09
RAP1B-213	ENST00000501412	AK7	Q96M32	723 aa		28.09	■■■□□ 2.09
RAP1B-213	ENST00000501412	RTCB	Q9Y3I0	505 aa	Known RBP	28.09	■■■□□ 2.09
RAP1B-213	ENST00000501412	NUP98	P52948	1817 aa		28.09	■■■□□ 2.09
RAP1B-213	ENST00000501412	C4A	P0C0L4	1744 aa		28.09	■■■□□ 2.09
RAP1B-213	ENST00000501412	HLF	Q16534	295 aa		28.08	■■■□□ 2.09
RAP1B-213	ENST00000501412	GIGYF2	Q6Y7W6	1299 aa	Known RBP	28.08	■■■□□ 2.09
RAP1B-213	ENST00000501412	MYD88	Q99836	296 aa		28.08	■■■□□ 2.09
RAP1B-213	ENST00000501412	SCN7A	Q01118	1682 aa		28.08	■■■□□ 2.09
RAP1B-213	ENST00000501412		A0A087WZG4	1122 aa		28.08	■■■□□ 2.09
RAP1B-213	ENST00000501412	CWF19L2	Q2TBE0	894 aa	Known RBP	28.08	■■■□□ 2.09
RAP1B-213	ENST00000501412	AKT1S1	Q96B36	256 aa		28.08	■■■□□ 2.09
RAP1B-213	ENST00000501412	NEURL1B	A8MQ27	555 aa		28.07	■■■□□ 2.08
RAP1B-213	ENST00000501412	NPM2	Q86SE8	214 aa	Known RBP	28.07	■■■□□ 2.08
RAP1B-213	ENST00000501412	MEIS3	Q99687	375 aa		28.07	■■■□□ 2.08
RAP1B-213	ENST00000501412	USP44	Q9H0E7	712 aa		28.07	■■■□□ 2.08
RAP1B-213	ENST00000501412	ANKRD36C	Q5JPF3	1778 aa		28.07	■■■□□ 2.08
RAP1B-213	ENST00000501412	NEXN	Q0ZGT2	675 aa		28.06	■■■□□ 2.08
RAP1B-213	ENST00000501412	TCIRG1	Q13488	830 aa		28.06	■■■□□ 2.08
RAP1B-213	ENST00000501412	ZNF827	Q17R98	1081 aa		28.06	■■■□□ 2.08
RAP1B-213	ENST00000501412	ISCA1	Q9BUE6	129 aa		28.06	■■■□□ 2.08
RAP1B-213	ENST00000501412	AFDN	P55196	1824 aa	Known RBP	28.06	■■■□□ 2.08
RAP1B-213	ENST00000501412	TUBGCP6	Q96RT7	1819 aa		28.05	■■■□□ 2.08
RAP1B-213	ENST00000501412	ADRA2B	P18089	450 aa		28.04	■■■□□ 2.08
RAP1B-213	ENST00000501412	ARHGEF1	Q92888	912 aa	Known RBP	28.04	■■■□□ 2.08
RAP1B-213	ENST00000501412	ARX	Q96QS3	562 aa		28.04	■■■□□ 2.08
RAP1B-213	ENST00000501412	CHMP4B	Q9H444	224 aa	Known RBP	28.04	■■■□□ 2.08
RAP1B-213	ENST00000501412	SRCAP	Q6ZRS2	3230 aa		28.03	■■■□□ 2.08
RAP1B-213	ENST00000501412	ATP5J2-PTCD1	G3V325	749 aa		28.03	■■■□□ 2.08
RAP1B-213	ENST00000501412	RGL2	O15211	777 aa		28.03	■■■□□ 2.08
RAP1B-213	ENST00000501412	TRIM28	Q13263	835 aa	Known RBP	28.03	■■■□□ 2.08
RAP1B-213	ENST00000501412	PPP4R2	Q9NY27	417 aa		28.03	■■■□□ 2.08
RAP1B-213	ENST00000501412	SSFA2	P28290	1259 aa		28.02	■■■□□ 2.08
RAP1B-213	ENST00000501412	NARF	Q9UHQ1	456 aa		28.02	■■■□□ 2.08
RAP1B-213	ENST00000501412	UTY	O14607	1347 aa		28.02	■■■□□ 2.08
RAP1B-213	ENST00000501412	GCKR	Q14397	625 aa		28.02	■■■□□ 2.08
RAP1B-213	ENST00000501412	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	28.01	■■■□□ 2.07
RAP1B-213	ENST00000501412	HSP90AB3P	Q58FF7	597 aa		28.01	■■■□□ 2.07
RAP1B-213	ENST00000501412	TRAPPC3L	Q5T215	181 aa		28.01	■■■□□ 2.07
RAP1B-213	ENST00000501412	BCL2L12	Q9HB09	334 aa		28.01	■■■□□ 2.07
RAP1B-213	ENST00000501412	PCDHB15	Q9Y5E8	787 aa		28.01	■■■□□ 2.07
RAP1B-213	ENST00000501412	CLEC4G	Q6UXB4	293 aa		28	■■■□□ 2.07
RAP1B-213	ENST00000501412	ZNF34	Q8IZ26	560 aa		28	■■■□□ 2.07
RAP1B-213	ENST00000501412	USP42	Q9H9J4	1324 aa	Known RBP	27.99	■■■□□ 2.07
RAP1B-213	ENST00000501412	PHF14	O94880	888 aa		27.99	■■■□□ 2.07
RAP1B-213	ENST00000501412	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.99	■■■□□ 2.07
RAP1B-213	ENST00000501412	CCDC191	Q8NCU4	936 aa		27.99	■■■□□ 2.07
RAP1B-213	ENST00000501412	SRP68	Q9UHB9	627 aa	Known RBP	27.99	■■■□□ 2.07
RAP1B-213	ENST00000501412	GNAI3	P08754	354 aa		27.98	■■■□□ 2.07
RAP1B-213	ENST00000501412	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.98	■■■□□ 2.07
RAP1B-213	ENST00000501412	GRM8	O00222	908 aa		27.97	■■■□□ 2.07
RAP1B-213	ENST00000501412	UBN2	Q6ZU65	1347 aa		27.96	■■■□□ 2.07
RAP1B-213	ENST00000501412	USPL1	Q5W0Q7	1092 aa		27.96	■■■□□ 2.07
RAP1B-213	ENST00000501412	C1orf115	Q9H7X2	142 aa		27.96	■■■□□ 2.07
RAP1B-213	ENST00000501412	CWC25	Q9NXE8	425 aa	Predicted RBP	27.96	■■■□□ 2.07
RAP1B-213	ENST00000501412	CASP7	P55210	303 aa		27.95	■■■□□ 2.07
RAP1B-213	ENST00000501412	NLRP10	Q86W26	655 aa		27.95	■■■□□ 2.07
RAP1B-213	ENST00000501412	QSER1	Q2KHR3	1735 aa		27.95	■■■□□ 2.07
RAP1B-213	ENST00000501412	RFC4	P35249	363 aa		27.95	■■■□□ 2.06
RAP1B-213	ENST00000501412	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.95	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms