RNA–Protein interactions for RNA: ENST00000498828.1

RNF7-207, Transcript of ring finger protein 7, humanhuman

TSL 2

Gene RNF7, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-207ENST00000498828 SETDB2Q96T68 719 aa17.54■□□□□ 0.4
RNF7-207ENST00000498828 TAF1DQ9H5J8 278 aaPredicted RBP17.54■□□□□ 0.4
RNF7-207ENST00000498828 CAMTA2O94983 1202 aa17.53■□□□□ 0.4
RNF7-207ENST00000498828 CTCFP49711 727 aaPredicted RBP17.53■□□□□ 0.4
RNF7-207ENST00000498828 TEFQ10587 303 aa17.53■□□□□ 0.4
RNF7-207ENST00000498828 MASTLQ96GX5 879 aa17.53■□□□□ 0.4
RNF7-207ENST00000498828 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
RNF7-207ENST00000498828 TMEM88BA6NKF7 163 aa17.52■□□□□ 0.4
RNF7-207ENST00000498828 DIAPH1O60610 1272 aaKnown RBP17.52■□□□□ 0.4
RNF7-207ENST00000498828 VEGFBP49765 207 aa17.52■□□□□ 0.4
RNF7-207ENST00000498828 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.4
RNF7-207ENST00000498828 A1BGP04217 495 aa17.51■□□□□ 0.39
RNF7-207ENST00000498828 ITGBL1O95965 494 aaPredicted RBP17.5■□□□□ 0.39
RNF7-207ENST00000498828 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
RNF7-207ENST00000498828 CCDC93Q567U6 631 aa17.5■□□□□ 0.39
RNF7-207ENST00000498828 IL17REQ8NFR9 667 aa17.5■□□□□ 0.39
RNF7-207ENST00000498828 ZNF541Q9H0D2 1346 aa17.49■□□□□ 0.39
RNF7-207ENST00000498828 CLSPNQ9HAW4 1339 aa17.49■□□□□ 0.39
RNF7-207ENST00000498828 GNAT3A8MTJ3 354 aa17.49■□□□□ 0.39
RNF7-207ENST00000498828 EAPPQ56P03 285 aaPredicted RBP17.49■□□□□ 0.39
RNF7-207ENST00000498828 DZIP3Q86Y13 1208 aaKnown RBP17.49■□□□□ 0.39
RNF7-207ENST00000498828 C7orf43Q8WVR3 580 aa17.49■□□□□ 0.39
RNF7-207ENST00000498828 FMNL2Q96PY5 1086 aa17.49■□□□□ 0.39
RNF7-207ENST00000498828 WBP1LQ9NX94 342 aa17.49■□□□□ 0.39
RNF7-207ENST00000498828 LBX1P52954 281 aa17.48■□□□□ 0.39
RNF7-207ENST00000498828 GAS2L2Q8NHY3 880 aa17.48■□□□□ 0.39
RNF7-207ENST00000498828 HACL1Q9UJ83 578 aa17.48■□□□□ 0.39
RNF7-207ENST00000498828 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
RNF7-207ENST00000498828 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
RNF7-207ENST00000498828 NBPF5PQ86XG9 351 aaPredicted RBP17.47■□□□□ 0.39
RNF7-207ENST00000498828 ZNF277Q9NRM2 450 aaPredicted RBP17.47■□□□□ 0.39
RNF7-207ENST00000498828 COL3A1P02461 1466 aaPredicted RBP17.47■□□□□ 0.39
RNF7-207ENST00000498828 NPR1P16066 1061 aa17.46■□□□□ 0.39
RNF7-207ENST00000498828 EPHX2P34913 555 aa17.46■□□□□ 0.39
RNF7-207ENST00000498828 CEMIPQ8WUJ3 1361 aa17.45■□□□□ 0.38
RNF7-207ENST00000498828 RASSF10A6NK89 507 aa17.45■□□□□ 0.38
RNF7-207ENST00000498828 KCNQ3O43525 872 aa17.45■□□□□ 0.38
RNF7-207ENST00000498828 PIP4K2AP48426 406 aaPredicted RBP17.45■□□□□ 0.38
RNF7-207ENST00000498828 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
RNF7-207ENST00000498828 CLEC4GQ6UXB4 293 aa17.45■□□□□ 0.38
RNF7-207ENST00000498828 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
RNF7-207ENST00000498828 U2SURPO15042 1029 aaKnown RBP17.44■□□□□ 0.38
RNF7-207ENST00000498828 HSPA8P11142 646 aaKnown RBP17.44■□□□□ 0.38
RNF7-207ENST00000498828 OLFM4Q6UX06 510 aa17.44■□□□□ 0.38
RNF7-207ENST00000498828 PNMA8AQ86V59 439 aaPredicted RBP17.44■□□□□ 0.38
RNF7-207ENST00000498828 KLRG2A4D1S0 409 aaPredicted RBP17.43■□□□□ 0.38
RNF7-207ENST00000498828 BTBD11A6QL63 1104 aa17.43■□□□□ 0.38
RNF7-207ENST00000498828 CC2D1BQ5T0F9 858 aaKnown RBP17.43■□□□□ 0.38
RNF7-207ENST00000498828 MAP1SQ66K74 1059 aaPredicted RBP17.43■□□□□ 0.38
RNF7-207ENST00000498828 RTKN2Q8IZC4 609 aa17.43■□□□□ 0.38
RNF7-207ENST00000498828 CNTROBQ8N137 903 aa17.43■□□□□ 0.38
RNF7-207ENST00000498828 ABHD8Q96I13 439 aa17.43■□□□□ 0.38
RNF7-207ENST00000498828 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
RNF7-207ENST00000498828 USP16Q9Y5T5 823 aa17.43■□□□□ 0.38
RNF7-207ENST00000498828 FZD9O00144 591 aa17.42■□□□□ 0.38
RNF7-207ENST00000498828 SLC34A2O95436 690 aa17.42■□□□□ 0.38
RNF7-207ENST00000498828 IARSP41252 1262 aaKnown RBP17.42■□□□□ 0.38
RNF7-207ENST00000498828 MAP2K1Q02750 393 aaPredicted RBP17.42■□□□□ 0.38
RNF7-207ENST00000498828 THSD7BQ9C0I4 1608 aa17.42■□□□□ 0.38
RNF7-207ENST00000498828 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
RNF7-207ENST00000498828 TPTE2Q6XPS3 522 aa17.41■□□□□ 0.38
RNF7-207ENST00000498828 ABT1Q9ULW3 272 aaKnown RBP17.41■□□□□ 0.38
RNF7-207ENST00000498828 KIF7Q2M1P5 1343 aa17.41■□□□□ 0.38
RNF7-207ENST00000498828 TRPM7Q96QT4 1865 aa17.4■□□□□ 0.38
RNF7-207ENST00000498828 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
RNF7-207ENST00000498828 PER1O15534 1290 aaPredicted RBP17.4■□□□□ 0.38
RNF7-207ENST00000498828 FAM161AQ3B820 660 aa17.4■□□□□ 0.38
RNF7-207ENST00000498828 GPC2Q8N158 579 aa17.4■□□□□ 0.38
RNF7-207ENST00000498828 SYNE4Q8N205 404 aa17.4■□□□□ 0.38
RNF7-207ENST00000498828 PCGF6Q9BYE7 350 aa17.4■□□□□ 0.38
RNF7-207ENST00000498828 NIP7Q9Y221 180 aaKnown RBP eCLIP17.4■□□□□ 0.38
RNF7-207ENST00000498828 LTBP1Q14766 1721 aa17.4■□□□□ 0.38
RNF7-207ENST00000498828 SNED1Q8TER0 1413 aa17.39■□□□□ 0.38
RNF7-207ENST00000498828 ALDH1B1P30837 517 aa17.39■□□□□ 0.37
RNF7-207ENST00000498828 FAM177BA6PVY3 158 aa17.38■□□□□ 0.37
RNF7-207ENST00000498828 RGL2O15211 777 aa17.38■□□□□ 0.37
RNF7-207ENST00000498828 DDX21Q9NR30 783 aaKnown RBP eCLIP17.38■□□□□ 0.37
RNF7-207ENST00000498828 COL4A5P29400 1685 aa17.37■□□□□ 0.37
RNF7-207ENST00000498828 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
RNF7-207ENST00000498828 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
RNF7-207ENST00000498828 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
RNF7-207ENST00000498828 PSMD1Q99460 953 aa17.37■□□□□ 0.37
RNF7-207ENST00000498828 LAMB4A4D0S4 1761 aa17.36■□□□□ 0.37
RNF7-207ENST00000498828 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
RNF7-207ENST00000498828 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
RNF7-207ENST00000498828 NBPF10Q6P3W6 841 aaKnown RBP17.36■□□□□ 0.37
RNF7-207ENST00000498828 NBPF15Q8N660 670 aa17.36■□□□□ 0.37
RNF7-207ENST00000498828 NUP98P52948 1817 aa17.35■□□□□ 0.37
RNF7-207ENST00000498828 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
RNF7-207ENST00000498828 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
RNF7-207ENST00000498828 GJA3Q9Y6H8 435 aa17.35■□□□□ 0.37
RNF7-207ENST00000498828 GTF2E1P29083 439 aaPredicted RBP17.34■□□□□ 0.37
RNF7-207ENST00000498828 ECE1P42892 770 aa17.34■□□□□ 0.37
RNF7-207ENST00000498828 FMR1Q06787 632 aaKnown RBP eCLIP17.34■□□□□ 0.37
RNF7-207ENST00000498828 HLFQ16534 295 aa17.34■□□□□ 0.37
RNF7-207ENST00000498828 PAXIP1Q6ZW49 1069 aaPredicted RBP17.34■□□□□ 0.37
RNF7-207ENST00000498828 ABCC12Q96J65 1359 aa17.34■□□□□ 0.37
RNF7-207ENST00000498828 CAPNS2Q96L46 248 aa17.34■□□□□ 0.37
RNF7-207ENST00000498828 RSPH6AQ9H0K4 717 aa17.34■□□□□ 0.37
RNF7-207ENST00000498828 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms