RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 RXRBP28702 533 aa8.88□□□□□ -0.99
GPATCH4-209ENST00000498641 RGS3P49796 1198 aa8.88□□□□□ -0.99
GPATCH4-209ENST00000498641 FAM196AQ6ZSG2 479 aa8.88□□□□□ -0.99
GPATCH4-209ENST00000498641 SKAP1Q86WV1 359 aa8.88□□□□□ -0.99
GPATCH4-209ENST00000498641 SIRT2Q8IXJ6 389 aa8.88□□□□□ -0.99
GPATCH4-209ENST00000498641 GCC1Q96CN9 775 aa8.88□□□□□ -0.99
GPATCH4-209ENST00000498641 CCDC87Q9NVE4 849 aa8.88□□□□□ -0.99
GPATCH4-209ENST00000498641 ZBTB47Q9UFB7 747 aaPredicted RBP8.88□□□□□ -0.99
GPATCH4-209ENST00000498641 PDZRN3Q9UPQ7 1066 aa8.88□□□□□ -0.99
GPATCH4-209ENST00000498641 UBR2Q8IWV8 1755 aa8.88□□□□□ -0.99
GPATCH4-209ENST00000498641 NEURL1BA8MQ27 555 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 ATP5J2-PTCD1G3V325 749 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 GRM8O00222 908 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 IGKV5-2P06315 115 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 NBPF7P0C2Y1 421 aaPredicted RBP8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 IL6STP40189 918 aaPredicted RBP8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 CRKLP46109 303 aaKnown RBP8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 ATP8B2P98198 1209 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 ITPK1Q13572 414 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 GCKRQ14397 625 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 PTF1AQ7RTS3 328 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 SMC5Q8IY18 1101 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 BCL11BQ9C0K0 894 aaPredicted RBP8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 ZBTB1Q9Y2K1 713 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 ITGB4P16144 1822 aa8.87□□□□□ -0.99
GPATCH4-209ENST00000498641 ANKRD45Q5TZF3 282 aa8.86□□□□□ -0.99
GPATCH4-209ENST00000498641 INTS5Q6P9B9 1019 aaKnown RBP8.86□□□□□ -0.99
GPATCH4-209ENST00000498641 LAMB4A4D0S4 1761 aa8.86□□□□□ -0.99
GPATCH4-209ENST00000498641 A0A087WZG4 1122 aa8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 SOCS7O14512 581 aa8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 KCNQ4P56696 695 aa8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 NUCB1Q02818 461 aa8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 TCIRG1Q13488 830 aa8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 CHD1LQ86WJ1 897 aa8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 DZIP3Q86Y13 1208 aaKnown RBP8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 BCL11AQ9H165 835 aa8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 DCTPP1Q9H773 170 aa8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 CWC25Q9NXE8 425 aaPredicted RBP8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 CCNL1Q9UK58 526 aaPredicted RBP8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 TBC1D2BQ9UPU7 963 aa8.85□□□□□ -0.99
GPATCH4-209ENST00000498641 UTYO14607 1347 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 MAP3K15Q6ZN16 1313 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 APBB1O00213 710 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 SRGAP3O43295 1099 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 TRIM37O94972 964 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 EIF5P55010 431 aaKnown RBP8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 HSP90AB3PQ58FF7 597 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 PPP1R42Q7Z4L9 355 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 CCDC191Q8NCU4 936 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 LINC00116Q8NCU8 138 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 JARID2Q92833 1246 aaPredicted RBP8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 LNPKQ9C0E8 428 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 CACNA1FO60840 1977 aa8.84□□□□□ -0.99
GPATCH4-209ENST00000498641 PNMA6EA0A0J9YXQ4 647 aa8.83□□□□□ -1
GPATCH4-209ENST00000498641 ERVV-1B6SEH8 477 aa8.83□□□□□ -1
GPATCH4-209ENST00000498641 HLFQ16534 295 aa8.83□□□□□ -1
GPATCH4-209ENST00000498641 GIGYF2Q6Y7W6 1299 aaKnown RBP8.83□□□□□ -1
GPATCH4-209ENST00000498641 UBE3BQ7Z3V4 1068 aa8.83□□□□□ -1
GPATCH4-209ENST00000498641 SUCLG2Q96I99 432 aa8.83□□□□□ -1
GPATCH4-209ENST00000498641 IBTKQ9P2D0 1353 aaPredicted RBP8.83□□□□□ -1
GPATCH4-209ENST00000498641 H7C1W4 665 aa8.82□□□□□ -1
GPATCH4-209ENST00000498641 SURF6O75683 361 aaKnown RBP8.82□□□□□ -1
GPATCH4-209ENST00000498641 GPTP24298 496 aa8.82□□□□□ -1
GPATCH4-209ENST00000498641 TRIM28Q13263 835 aaKnown RBP8.82□□□□□ -1
GPATCH4-209ENST00000498641 OS9Q13438 667 aaPredicted RBP8.82□□□□□ -1
GPATCH4-209ENST00000498641 POLA2Q14181 598 aa8.82□□□□□ -1
GPATCH4-209ENST00000498641 RTL5Q5HYW3 569 aaPredicted RBP8.82□□□□□ -1
GPATCH4-209ENST00000498641 RC3H1Q5TC82 1133 aaKnown RBP8.82□□□□□ -1
GPATCH4-209ENST00000498641 SSH3Q8TE77 659 aa8.82□□□□□ -1
GPATCH4-209ENST00000498641 ISCA1Q9BUE6 129 aa8.82□□□□□ -1
GPATCH4-209ENST00000498641 BICC1Q9H694 974 aaKnown RBP8.82□□□□□ -1
GPATCH4-209ENST00000498641 EXOC6BQ9Y2D4 811 aa8.82□□□□□ -1
GPATCH4-209ENST00000498641 CNTNAP4Q9C0A0 1308 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 GNPATO15228 680 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 SMARCA5O60264 1052 aaPredicted RBP8.81□□□□□ -1
GPATCH4-209ENST00000498641 PDE4AP27815 886 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 MTX1Q13505 466 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 HSP90AB4PQ58FF6 505 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 POTEAQ6S8J7 498 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 LRRCC1Q9C099 1032 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 TSHZ2Q9NRE2 1034 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 RGS17Q9UGC6 210 aaPredicted RBP8.81□□□□□ -1
GPATCH4-209ENST00000498641 ZNF652Q9Y2D9 606 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 NHSQ6T4R5 1651 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 KAT6BQ8WYB5 2073 aa8.81□□□□□ -1
GPATCH4-209ENST00000498641 TJP1Q07157 1748 aa8.8□□□□□ -1
GPATCH4-209ENST00000498641 RAB11FIP3O75154 756 aa8.8□□□□□ -1
GPATCH4-209ENST00000498641 RPS6KA4O75676 772 aa8.8□□□□□ -1
GPATCH4-209ENST00000498641 PCCAP05165 728 aaPredicted RBP8.8□□□□□ -1
GPATCH4-209ENST00000498641 HMGB2P26583 209 aaKnown RBP8.8□□□□□ -1
GPATCH4-209ENST00000498641 NLRP10Q86W26 655 aa8.8□□□□□ -1
GPATCH4-209ENST00000498641 KAZALD1Q96I82 304 aa8.8□□□□□ -1
GPATCH4-209ENST00000498641 AK7Q96M32 723 aa8.8□□□□□ -1
GPATCH4-209ENST00000498641 TRMT112Q9UI30 125 aaKnown RBP8.8□□□□□ -1
GPATCH4-209ENST00000498641 CHMP3Q9Y3E7 222 aa8.8□□□□□ -1
GPATCH4-209ENST00000498641 RTCBQ9Y3I0 505 aaKnown RBP8.8□□□□□ -1
GPATCH4-209ENST00000498641 COL15A1P39059 1388 aa8.8□□□□□ -1
GPATCH4-209ENST00000498641 FAM177BA6PVY3 158 aa8.79□□□□□ -1
GPATCH4-209ENST00000498641 ZPR1O75312 459 aa8.79□□□□□ -1
GPATCH4-209ENST00000498641 CAMTA2O94983 1202 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms