RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 PCNTO95613 3336 aa18.23■□□□□ 0.51
SHANK2-217ENST00000498519 POTECB2RU33 542 aa18.23■□□□□ 0.51
SHANK2-217ENST00000498519 HTATSF1O43719 755 aaKnown RBP18.23■□□□□ 0.51
SHANK2-217ENST00000498519 CCDC93Q567U6 631 aa18.23■□□□□ 0.51
SHANK2-217ENST00000498519 CCDC24Q8N4L8 307 aa18.23■□□□□ 0.51
SHANK2-217ENST00000498519 PHACTR3Q96KR7 559 aa18.23■□□□□ 0.51
SHANK2-217ENST00000498519 RSPH6AQ9H0K4 717 aa18.23■□□□□ 0.51
SHANK2-217ENST00000498519 DLEC1Q9Y238 1755 aa18.22■□□□□ 0.51
SHANK2-217ENST00000498519 AFDNP55196 1824 aaKnown RBP18.22■□□□□ 0.51
SHANK2-217ENST00000498519 NPR1P16066 1061 aa18.22■□□□□ 0.51
SHANK2-217ENST00000498519 USP16Q9Y5T5 823 aa18.22■□□□□ 0.51
SHANK2-217ENST00000498519 SBF1O95248 1867 aa18.22■□□□□ 0.51
SHANK2-217ENST00000498519 HSPA1AP0DMV8 641 aaKnown RBP18.21■□□□□ 0.51
SHANK2-217ENST00000498519 HSPA1BP0DMV9 641 aaKnown RBP18.21■□□□□ 0.51
SHANK2-217ENST00000498519 U2AF1L5P0DN76 240 aaPredicted RBP18.21■□□□□ 0.51
SHANK2-217ENST00000498519 U2AF1Q01081 240 aaKnown RBP eCLIP18.21■□□□□ 0.51
SHANK2-217ENST00000498519 RTKN2Q8IZC4 609 aa18.21■□□□□ 0.51
SHANK2-217ENST00000498519 DDNO94850 711 aaPredicted RBP18.2■□□□□ 0.5
SHANK2-217ENST00000498519 NEFMP07197 916 aa18.2■□□□□ 0.5
SHANK2-217ENST00000498519 ALDH1B1P30837 517 aa18.2■□□□□ 0.5
SHANK2-217ENST00000498519 L3MBTL3Q96JM7 780 aaPredicted RBP18.2■□□□□ 0.5
SHANK2-217ENST00000498519 SCN7AQ01118 1682 aa18.19■□□□□ 0.5
SHANK2-217ENST00000498519 KLRG2A4D1S0 409 aaPredicted RBP18.19■□□□□ 0.5
SHANK2-217ENST00000498519 KCNQ3O43525 872 aa18.19■□□□□ 0.5
SHANK2-217ENST00000498519 GTF2E1P29083 439 aaPredicted RBP18.19■□□□□ 0.5
SHANK2-217ENST00000498519 LDHDQ86WU2 507 aa18.19■□□□□ 0.5
SHANK2-217ENST00000498519 NIP7Q9Y221 180 aaKnown RBP eCLIP18.19■□□□□ 0.5
SHANK2-217ENST00000498519 FKBP4Q02790 459 aaKnown RBP eCLIP18.18■□□□□ 0.5
SHANK2-217ENST00000498519 C7orf43Q8WVR3 580 aa18.18■□□□□ 0.5
SHANK2-217ENST00000498519 MCM10Q7L590 875 aa18.17■□□□□ 0.5
SHANK2-217ENST00000498519 PNISRQ8TF01 805 aaKnown RBP18.17■□□□□ 0.5
SHANK2-217ENST00000498519 TIAM2Q8IVF5 1701 aa18.16■□□□□ 0.5
SHANK2-217ENST00000498519 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
SHANK2-217ENST00000498519 NYXQ9GZU5 481 aa18.16■□□□□ 0.5
SHANK2-217ENST00000498519 GRIPAP1Q4V328 841 aa18.15■□□□□ 0.5
SHANK2-217ENST00000498519 PNMA8AQ86V59 439 aaPredicted RBP18.15■□□□□ 0.5
SHANK2-217ENST00000498519 TAF1DQ9H5J8 278 aaPredicted RBP18.15■□□□□ 0.5
SHANK2-217ENST00000498519 CAPN15O75808 1086 aa18.14■□□□□ 0.49
SHANK2-217ENST00000498519 PPP2R1AP30153 589 aa18.14■□□□□ 0.49
SHANK2-217ENST00000498519 PIP4K2AP48426 406 aaPredicted RBP18.14■□□□□ 0.49
SHANK2-217ENST00000498519 CC2D2BQ6DHV5 1058 aa18.14■□□□□ 0.49
SHANK2-217ENST00000498519 HACL1Q9UJ83 578 aa18.14■□□□□ 0.49
SHANK2-217ENST00000498519 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
SHANK2-217ENST00000498519 JDP2Q8WYK2 163 aa18.13■□□□□ 0.49
SHANK2-217ENST00000498519 MKRN1Q9UHC7 482 aaKnown RBP18.13■□□□□ 0.49
SHANK2-217ENST00000498519 TMEM88BA6NKF7 163 aa18.12■□□□□ 0.49
SHANK2-217ENST00000498519 NBPF26B4DH59 902 aa18.12■□□□□ 0.49
SHANK2-217ENST00000498519 ERVV-1B6SEH8 477 aa18.12■□□□□ 0.49
SHANK2-217ENST00000498519 NBPF10Q6P3W6 841 aaKnown RBP18.12■□□□□ 0.49
SHANK2-217ENST00000498519 NBPF15Q8N660 670 aa18.12■□□□□ 0.49
SHANK2-217ENST00000498519 AIDAQ96BJ3 306 aa18.12■□□□□ 0.49
SHANK2-217ENST00000498519 ZNF277Q9NRM2 450 aaPredicted RBP18.12■□□□□ 0.49
SHANK2-217ENST00000498519 PASKQ96RG2 1323 aa18.12■□□□□ 0.49
SHANK2-217ENST00000498519 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
SHANK2-217ENST00000498519 POTEJP0CG39 1038 aa18.11■□□□□ 0.49
SHANK2-217ENST00000498519 IARSP41252 1262 aaKnown RBP18.11■□□□□ 0.49
SHANK2-217ENST00000498519 EAPPQ56P03 285 aaPredicted RBP18.11■□□□□ 0.49
SHANK2-217ENST00000498519 KIF6Q6ZMV9 814 aa18.11■□□□□ 0.49
SHANK2-217ENST00000498519 PSMD1Q99460 953 aa18.11■□□□□ 0.49
SHANK2-217ENST00000498519 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
SHANK2-217ENST00000498519 CLEC11AQ9Y240 323 aa18.11■□□□□ 0.49
SHANK2-217ENST00000498519 CNTNAP1P78357 1384 aa18.11■□□□□ 0.49
SHANK2-217ENST00000498519 SIPA1L3O60292 1781 aaPredicted RBP18.11■□□□□ 0.49
SHANK2-217ENST00000498519 ANKRD31Q8N7Z5 1873 aa18.11■□□□□ 0.49
SHANK2-217ENST00000498519 FAM177BA6PVY3 158 aa18.1■□□□□ 0.49
SHANK2-217ENST00000498519 EPHX2P34913 555 aa18.1■□□□□ 0.49
SHANK2-217ENST00000498519 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
SHANK2-217ENST00000498519 GPC2Q8N158 579 aa18.1■□□□□ 0.49
SHANK2-217ENST00000498519 FER1L6Q2WGJ9 1857 aa18.09■□□□□ 0.49
SHANK2-217ENST00000498519 COL11A2P13942 1736 aaPredicted RBP18.09■□□□□ 0.49
SHANK2-217ENST00000498519 FZD9O00144 591 aa18.09■□□□□ 0.49
SHANK2-217ENST00000498519 CRY2Q49AN0 593 aa18.09■□□□□ 0.49
SHANK2-217ENST00000498519 SYNE4Q8N205 404 aa18.09■□□□□ 0.49
SHANK2-217ENST00000498519 TMX4Q9H1E5 349 aaPredicted RBP18.09■□□□□ 0.49
SHANK2-217ENST00000498519 VIRMAQ69YN4 1812 aaKnown RBP18.09■□□□□ 0.49
SHANK2-217ENST00000498519 EIF6P56537 245 aaKnown RBP18.08■□□□□ 0.48
SHANK2-217ENST00000498519 HLFQ16534 295 aa18.08■□□□□ 0.48
SHANK2-217ENST00000498519 RPGRQ92834 1020 aaKnown RBP18.08■□□□□ 0.48
SHANK2-217ENST00000498519 PRDM10Q9NQV6 1147 aa18.08■□□□□ 0.48
SHANK2-217ENST00000498519 ZNF541Q9H0D2 1346 aa18.07■□□□□ 0.48
SHANK2-217ENST00000498519 ITGBL1O95965 494 aaPredicted RBP18.07■□□□□ 0.48
SHANK2-217ENST00000498519 LMOD1P29536 600 aaPredicted RBP18.07■□□□□ 0.48
SHANK2-217ENST00000498519 BCORQ6W2J9 1755 aa18.07■□□□□ 0.48
SHANK2-217ENST00000498519 IBTKQ9P2D0 1353 aaPredicted RBP18.06■□□□□ 0.48
SHANK2-217ENST00000498519 MAP3K15Q6ZN16 1313 aa18.06■□□□□ 0.48
SHANK2-217ENST00000498519 HOXA10P31260 410 aaPredicted RBP18.06■□□□□ 0.48
SHANK2-217ENST00000498519 CTCFP49711 727 aaPredicted RBP18.06■□□□□ 0.48
SHANK2-217ENST00000498519 RBM17Q96I25 401 aaKnown RBP18.06■□□□□ 0.48
SHANK2-217ENST00000498519 SLX4Q8IY92 1834 aa18.05■□□□□ 0.48
SHANK2-217ENST00000498519 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
SHANK2-217ENST00000498519 CNTROBQ8N137 903 aa18.05■□□□□ 0.48
SHANK2-217ENST00000498519 NGEFQ8N5V2 710 aa18.05■□□□□ 0.48
SHANK2-217ENST00000498519 MIS18AQ9NYP9 233 aa18.05■□□□□ 0.48
SHANK2-217ENST00000498519 RNF123Q5XPI4 1314 aa18.04■□□□□ 0.48
SHANK2-217ENST00000498519 DICER1Q9UPY3 1922 aaKnown RBP18.04■□□□□ 0.48
SHANK2-217ENST00000498519 VEGFBP49765 207 aa18.04■□□□□ 0.48
SHANK2-217ENST00000498519 RRP7AQ9Y3A4 280 aaKnown RBP18.04■□□□□ 0.48
SHANK2-217ENST00000498519 RIC1Q4ADV7 1423 aa18.04■□□□□ 0.48
SHANK2-217ENST00000498519 MAPK8IP3Q9UPT6 1336 aa18.03■□□□□ 0.48
SHANK2-217ENST00000498519 EIF4A1P60842 406 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms