RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
CCDC58-207ENST00000498466 IQCA1LA6NCM1 817 aa18.79■□□□□ 0.6
CCDC58-207ENST00000498466 CAMTA2O94983 1202 aa18.79■□□□□ 0.6
CCDC58-207ENST00000498466 DZIP3Q86Y13 1208 aaKnown RBP18.78■□□□□ 0.6
CCDC58-207ENST00000498466 DICER1Q9UPY3 1922 aaKnown RBP18.78■□□□□ 0.6
CCDC58-207ENST00000498466 KIF7Q2M1P5 1343 aa18.77■□□□□ 0.6
CCDC58-207ENST00000498466 LDHDQ86WU2 507 aa18.77■□□□□ 0.6
CCDC58-207ENST00000498466 CNTNAP1P78357 1384 aa18.77■□□□□ 0.6
CCDC58-207ENST00000498466 FOXN1O15353 648 aa18.76■□□□□ 0.59
CCDC58-207ENST00000498466 SLX4Q8IY92 1834 aa18.75■□□□□ 0.59
CCDC58-207ENST00000498466 BTBD11A6QL63 1104 aa18.75■□□□□ 0.59
CCDC58-207ENST00000498466 CNGB1Q14028 1251 aaPredicted RBP18.75■□□□□ 0.59
CCDC58-207ENST00000498466 CCDC93Q567U6 631 aa18.75■□□□□ 0.59
CCDC58-207ENST00000498466 NBPF5PQ86XG9 351 aaPredicted RBP18.75■□□□□ 0.59
CCDC58-207ENST00000498466 TAF1DQ9H5J8 278 aaPredicted RBP18.75■□□□□ 0.59
CCDC58-207ENST00000498466 PASKQ96RG2 1323 aa18.74■□□□□ 0.59
CCDC58-207ENST00000498466 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
CCDC58-207ENST00000498466 KCNQ3O43525 872 aa18.74■□□□□ 0.59
CCDC58-207ENST00000498466 PIP4K2AP48426 406 aaPredicted RBP18.74■□□□□ 0.59
CCDC58-207ENST00000498466 EAPPQ56P03 285 aaPredicted RBP18.74■□□□□ 0.59
CCDC58-207ENST00000498466 AIDAQ96BJ3 306 aa18.74■□□□□ 0.59
CCDC58-207ENST00000498466 L3MBTL3Q96JM7 780 aaPredicted RBP18.74■□□□□ 0.59
CCDC58-207ENST00000498466 TMEM88BA6NKF7 163 aa18.73■□□□□ 0.59
CCDC58-207ENST00000498466 ZNF652Q9Y2D9 606 aa18.73■□□□□ 0.59
CCDC58-207ENST00000498466 COL3A1P02461 1466 aaPredicted RBP18.72■□□□□ 0.59
CCDC58-207ENST00000498466 CEMIPQ8WUJ3 1361 aa18.72■□□□□ 0.59
CCDC58-207ENST00000498466 CACNA1SQ13698 1873 aa18.72■□□□□ 0.59
CCDC58-207ENST00000498466 NPR1P16066 1061 aa18.72■□□□□ 0.59
CCDC58-207ENST00000498466 FKBP4Q02790 459 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCDC58-207ENST00000498466 CLEC4GQ6UXB4 293 aa18.72■□□□□ 0.59
CCDC58-207ENST00000498466 C7orf43Q8WVR3 580 aa18.72■□□□□ 0.59
CCDC58-207ENST00000498466 PRDM10Q9NQV6 1147 aa18.72■□□□□ 0.59
CCDC58-207ENST00000498466 ZNF277Q9NRM2 450 aaPredicted RBP18.72■□□□□ 0.59
CCDC58-207ENST00000498466 CLEC11AQ9Y240 323 aa18.72■□□□□ 0.59
CCDC58-207ENST00000498466 USP16Q9Y5T5 823 aa18.72■□□□□ 0.59
CCDC58-207ENST00000498466 SIPA1L3O60292 1781 aaPredicted RBP18.71■□□□□ 0.59
CCDC58-207ENST00000498466 CTCFP49711 727 aaPredicted RBP18.71■□□□□ 0.59
CCDC58-207ENST00000498466 VEGFBP49765 207 aa18.71■□□□□ 0.59
CCDC58-207ENST00000498466 HACL1Q9UJ83 578 aa18.71■□□□□ 0.59
CCDC58-207ENST00000498466 ZNF541Q9H0D2 1346 aa18.71■□□□□ 0.59
CCDC58-207ENST00000498466 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
CCDC58-207ENST00000498466 ARFGEF2Q9Y6D5 1785 aa18.7■□□□□ 0.58
CCDC58-207ENST00000498466 PRAMEF22A3QJZ6 481 aa18.69■□□□□ 0.58
CCDC58-207ENST00000498466 ITGBL1O95965 494 aaPredicted RBP18.69■□□□□ 0.58
CCDC58-207ENST00000498466 OLFM4Q6UX06 510 aa18.69■□□□□ 0.58
CCDC58-207ENST00000498466 TPTE2Q6XPS3 522 aa18.69■□□□□ 0.58
CCDC58-207ENST00000498466 RTKN2Q8IZC4 609 aa18.69■□□□□ 0.58
CCDC58-207ENST00000498466 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
CCDC58-207ENST00000498466 NIP7Q9Y221 180 aaKnown RBP eCLIP18.69■□□□□ 0.58
CCDC58-207ENST00000498466 SCN4AP35499 1836 aa18.69■□□□□ 0.58
CCDC58-207ENST00000498466 FAM177BA6PVY3 158 aa18.68■□□□□ 0.58
CCDC58-207ENST00000498466 SNRPA1P09661 255 aaKnown RBP18.68■□□□□ 0.58
CCDC58-207ENST00000498466 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
CCDC58-207ENST00000498466 EPHX2P34913 555 aa18.68■□□□□ 0.58
CCDC58-207ENST00000498466 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
CCDC58-207ENST00000498466 KLRG2A4D1S0 409 aaPredicted RBP18.67■□□□□ 0.58
CCDC58-207ENST00000498466 PNMA8AQ86V59 439 aaPredicted RBP18.67■□□□□ 0.58
CCDC58-207ENST00000498466 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
CCDC58-207ENST00000498466 IARSP41252 1262 aaKnown RBP18.66■□□□□ 0.58
CCDC58-207ENST00000498466 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
CCDC58-207ENST00000498466 WBP1LQ9NX94 342 aa18.66■□□□□ 0.58
CCDC58-207ENST00000498466 GTF2E1P29083 439 aaPredicted RBP18.65■□□□□ 0.58
CCDC58-207ENST00000498466 ALDH1B1P30837 517 aa18.65■□□□□ 0.58
CCDC58-207ENST00000498466 LBX1P52954 281 aa18.65■□□□□ 0.58
CCDC58-207ENST00000498466 MAP1SQ66K74 1059 aaPredicted RBP18.65■□□□□ 0.58
CCDC58-207ENST00000498466 CNTROBQ8N137 903 aa18.65■□□□□ 0.58
CCDC58-207ENST00000498466 SYNE4Q8N205 404 aa18.65■□□□□ 0.58
CCDC58-207ENST00000498466 RSPH6AQ9H0K4 717 aa18.65■□□□□ 0.58
CCDC58-207ENST00000498466 NPC1L1Q9UHC9 1359 aa18.65■□□□□ 0.58
CCDC58-207ENST00000498466 FZD9O00144 591 aa18.64■□□□□ 0.57
CCDC58-207ENST00000498466 DEFB115Q30KQ5 88 aa18.64■□□□□ 0.57
CCDC58-207ENST00000498466 MCM10Q7L590 875 aa18.64■□□□□ 0.57
CCDC58-207ENST00000498466 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
CCDC58-207ENST00000498466 RASSF10A6NK89 507 aa18.63■□□□□ 0.57
CCDC58-207ENST00000498466 NBPF26B4DH59 902 aa18.63■□□□□ 0.57
CCDC58-207ENST00000498466 RGL2O15211 777 aa18.63■□□□□ 0.57
CCDC58-207ENST00000498466 NBPF10Q6P3W6 841 aaKnown RBP18.63■□□□□ 0.57
CCDC58-207ENST00000498466 GPC2Q8N158 579 aa18.63■□□□□ 0.57
CCDC58-207ENST00000498466 NBPF15Q8N660 670 aa18.63■□□□□ 0.57
CCDC58-207ENST00000498466 JDP2Q8WYK2 163 aa18.63■□□□□ 0.57
CCDC58-207ENST00000498466 ABT1Q9ULW3 272 aaKnown RBP18.63■□□□□ 0.57
CCDC58-207ENST00000498466 HLFQ16534 295 aa18.62■□□□□ 0.57
CCDC58-207ENST00000498466 ADAMTSL1Q8N6G6 1762 aa18.61■□□□□ 0.57
CCDC58-207ENST00000498466 WDR33Q9C0J8 1336 aaKnown RBP18.61■□□□□ 0.57
CCDC58-207ENST00000498466 NUDCQ9Y266 331 aa18.61■□□□□ 0.57
CCDC58-207ENST00000498466 GJA3Q9Y6H8 435 aa18.61■□□□□ 0.57
CCDC58-207ENST00000498466 HSPA8P11142 646 aaKnown RBP18.6■□□□□ 0.57
CCDC58-207ENST00000498466 EIF6P56537 245 aaKnown RBP18.6■□□□□ 0.57
CCDC58-207ENST00000498466 MAP2K1Q02750 393 aaPredicted RBP18.6■□□□□ 0.57
CCDC58-207ENST00000498466 DCTN1Q14203 1278 aa18.6■□□□□ 0.57
CCDC58-207ENST00000498466 PSMD1Q99460 953 aa18.6■□□□□ 0.57
CCDC58-207ENST00000498466 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
CCDC58-207ENST00000498466 LMOD1P29536 600 aaPredicted RBP18.59■□□□□ 0.57
CCDC58-207ENST00000498466 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCDC58-207ENST00000498466 NYXQ9GZU5 481 aa18.59■□□□□ 0.57
CCDC58-207ENST00000498466 NUTM1Q86Y26 1132 aa18.58■□□□□ 0.56
CCDC58-207ENST00000498466 NGEFQ8N5V2 710 aa18.58■□□□□ 0.56
CCDC58-207ENST00000498466 DDX21Q9NR30 783 aaKnown RBP eCLIP18.58■□□□□ 0.56
CCDC58-207ENST00000498466 CRY2Q49AN0 593 aa18.57■□□□□ 0.56
CCDC58-207ENST00000498466 CC2D2BQ6DHV5 1058 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms