RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 LMNB1P20700 586 aa13.09□□□□□ -0.31
RNF8-208ENST00000498460 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
RNF8-208ENST00000498460 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
RNF8-208ENST00000498460 NFE2L2Q16236 605 aa13.08□□□□□ -0.32
RNF8-208ENST00000498460 CLEC4GQ6UXB4 293 aa13.08□□□□□ -0.32
RNF8-208ENST00000498460 NBPF5PQ86XG9 351 aaPredicted RBP13.08□□□□□ -0.32
RNF8-208ENST00000498460 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
RNF8-208ENST00000498460 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
RNF8-208ENST00000498460 RRAGCQ9HB90 399 aa13.08□□□□□ -0.32
RNF8-208ENST00000498460 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
RNF8-208ENST00000498460 C21orf2O43822 256 aa13.07□□□□□ -0.32
RNF8-208ENST00000498460 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
RNF8-208ENST00000498460 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
RNF8-208ENST00000498460 PCNTO95613 3336 aa13.06□□□□□ -0.32
RNF8-208ENST00000498460 APLP1P51693 650 aa13.06□□□□□ -0.32
RNF8-208ENST00000498460 RALBP1Q15311 655 aa13.06□□□□□ -0.32
RNF8-208ENST00000498460 RBM46Q8TBY0 533 aaKnown RBP13.06□□□□□ -0.32
RNF8-208ENST00000498460 THUMPD2Q9BTF0 503 aaKnown RBP13.06□□□□□ -0.32
RNF8-208ENST00000498460 NIP7Q9Y221 180 aaKnown RBP eCLIP13.06□□□□□ -0.32
RNF8-208ENST00000498460 ZC3H4Q9UPT8 1303 aaKnown RBP13.06□□□□□ -0.32
RNF8-208ENST00000498460 WDR90Q96KV7 1748 aa13.05□□□□□ -0.32
RNF8-208ENST00000498460 FAM177BA6PVY3 158 aa13.05□□□□□ -0.32
RNF8-208ENST00000498460 NFKBIEO00221 500 aa13.05□□□□□ -0.32
RNF8-208ENST00000498460 DDX10Q13206 875 aaKnown RBP13.05□□□□□ -0.32
RNF8-208ENST00000498460 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
RNF8-208ENST00000498460 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
RNF8-208ENST00000498460 CNKSR1Q969H4 720 aa13.05□□□□□ -0.32
RNF8-208ENST00000498460 MASTLQ96GX5 879 aa13.05□□□□□ -0.32
RNF8-208ENST00000498460 SRGNP10124 158 aa13.04□□□□□ -0.32
RNF8-208ENST00000498460 GTF2E1P29083 439 aaPredicted RBP13.04□□□□□ -0.32
RNF8-208ENST00000498460 PRELPP51888 382 aa13.04□□□□□ -0.32
RNF8-208ENST00000498460 EIF4A1P60842 406 aaKnown RBP13.04□□□□□ -0.32
RNF8-208ENST00000498460 STYK1Q6J9G0 422 aa13.04□□□□□ -0.32
RNF8-208ENST00000498460 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
RNF8-208ENST00000498460 GLTPD2A6NH11 291 aa13.03□□□□□ -0.32
RNF8-208ENST00000498460 RGL2O15211 777 aa13.03□□□□□ -0.32
RNF8-208ENST00000498460 RIPK4P57078 832 aa13.03□□□□□ -0.32
RNF8-208ENST00000498460 HLFQ16534 295 aa13.03□□□□□ -0.32
RNF8-208ENST00000498460 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
RNF8-208ENST00000498460 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
RNF8-208ENST00000498460 MYL6BP14649 208 aa13.02□□□□□ -0.33
RNF8-208ENST00000498460 VEGFAP15692 232 aaPredicted RBP13.02□□□□□ -0.33
RNF8-208ENST00000498460 FSTL1Q12841 308 aa13.02□□□□□ -0.33
RNF8-208ENST00000498460 ERFEQ4G0M1 354 aa13.02□□□□□ -0.33
RNF8-208ENST00000498460 SOGA3Q5TF21 947 aa13.02□□□□□ -0.33
RNF8-208ENST00000498460 KIF6Q6ZMV9 814 aa13.02□□□□□ -0.33
RNF8-208ENST00000498460 TAOK3Q9H2K8 898 aa13.02□□□□□ -0.33
RNF8-208ENST00000498460 NPR1P16066 1061 aa13.01□□□□□ -0.33
RNF8-208ENST00000498460 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
RNF8-208ENST00000498460 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
RNF8-208ENST00000498460 ERVV-1B6SEH8 477 aa13□□□□□ -0.33
RNF8-208ENST00000498460 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
RNF8-208ENST00000498460 NYXQ9GZU5 481 aa13□□□□□ -0.33
RNF8-208ENST00000498460 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
RNF8-208ENST00000498460 LTBP3Q9NS15 1303 aa12.99□□□□□ -0.33
RNF8-208ENST00000498460 TMPOP42166 694 aaKnown RBP12.99□□□□□ -0.33
RNF8-208ENST00000498460 LMOD3Q0VAK6 560 aa12.99□□□□□ -0.33
RNF8-208ENST00000498460 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
RNF8-208ENST00000498460 TTLL7Q6ZT98 887 aa12.99□□□□□ -0.33
RNF8-208ENST00000498460 ZBTB3Q9H5J0 574 aa12.99□□□□□ -0.33
RNF8-208ENST00000498460 ANKRD36CQ5JPF3 1778 aa12.99□□□□□ -0.33
RNF8-208ENST00000498460 SCN4AP35499 1836 aa12.98□□□□□ -0.33
RNF8-208ENST00000498460 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
RNF8-208ENST00000498460 EIF2S2P20042 333 aaKnown RBP12.98□□□□□ -0.33
RNF8-208ENST00000498460 GPTP24298 496 aa12.98□□□□□ -0.33
RNF8-208ENST00000498460 ALDH1B1P30837 517 aa12.98□□□□□ -0.33
RNF8-208ENST00000498460 WDR43Q15061 677 aaKnown RBP eCLIP12.98□□□□□ -0.33
RNF8-208ENST00000498460 CCDC93Q567U6 631 aa12.98□□□□□ -0.33
RNF8-208ENST00000498460 CCDC146Q8IYE0 955 aa12.98□□□□□ -0.33
RNF8-208ENST00000498460 ERBB4Q15303 1308 aa12.97□□□□□ -0.33
RNF8-208ENST00000498460 NUTM1Q86Y26 1132 aa12.97□□□□□ -0.33
RNF8-208ENST00000498460 DNAJC5GQ8N7S2 189 aa12.97□□□□□ -0.33
RNF8-208ENST00000498460 C7orf43Q8WVR3 580 aa12.97□□□□□ -0.33
RNF8-208ENST00000498460 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
RNF8-208ENST00000498460 HTRA3P83110 453 aa12.96□□□□□ -0.33
RNF8-208ENST00000498460 RTKN2Q8IZC4 609 aa12.96□□□□□ -0.33
RNF8-208ENST00000498460 DDNO94850 711 aaPredicted RBP12.95□□□□□ -0.34
RNF8-208ENST00000498460 FKBP4Q02790 459 aaKnown RBP eCLIP12.95□□□□□ -0.34
RNF8-208ENST00000498460 OLFM4Q6UX06 510 aa12.95□□□□□ -0.34
RNF8-208ENST00000498460 GIGYF2Q6Y7W6 1299 aaKnown RBP12.95□□□□□ -0.34
RNF8-208ENST00000498460 NECTIN2Q92692 538 aa12.95□□□□□ -0.34
RNF8-208ENST00000498460 RPGRQ92834 1020 aaKnown RBP12.95□□□□□ -0.34
RNF8-208ENST00000498460 RUNDC1Q96C34 613 aa12.95□□□□□ -0.34
RNF8-208ENST00000498460 ZNF277Q9NRM2 450 aaPredicted RBP12.95□□□□□ -0.34
RNF8-208ENST00000498460 LAS1LQ9Y4W2 734 aaKnown RBP12.95□□□□□ -0.34
RNF8-208ENST00000498460 ABCC12Q96J65 1359 aa12.94□□□□□ -0.34
RNF8-208ENST00000498460 LAMB2P55268 1798 aa12.94□□□□□ -0.34
RNF8-208ENST00000498460 UBN2Q6ZU65 1347 aa12.94□□□□□ -0.34
RNF8-208ENST00000498460 POTECB2RU33 542 aa12.94□□□□□ -0.34
RNF8-208ENST00000498460 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
RNF8-208ENST00000498460 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
RNF8-208ENST00000498460 ZNF34Q8IZ26 560 aa12.94□□□□□ -0.34
RNF8-208ENST00000498460 ANXA1P04083 346 aa12.93□□□□□ -0.34
RNF8-208ENST00000498460 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
RNF8-208ENST00000498460 PDIA6Q15084 440 aa12.93□□□□□ -0.34
RNF8-208ENST00000498460 CRY2Q49AN0 593 aa12.93□□□□□ -0.34
RNF8-208ENST00000498460 PARP10Q53GL7 1025 aa12.93□□□□□ -0.34
RNF8-208ENST00000498460 KLRG1Q96E93 195 aa12.93□□□□□ -0.34
RNF8-208ENST00000498460 ADAMTS8Q9UP79 889 aa12.93□□□□□ -0.34
RNF8-208ENST00000498460 TAF1P21675 1872 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms