RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 TTC5Q8N0Z6 440 aa15.29■□□□□ 0.04
AFF3-215ENST00000498090 SPRYD3Q8NCJ5 442 aa15.29■□□□□ 0.04
AFF3-215ENST00000498090 ATG3Q9NT62 314 aa15.29■□□□□ 0.04
AFF3-215ENST00000498090 NHSQ6T4R5 1651 aa15.29■□□□□ 0.04
AFF3-215ENST00000498090 HSP90AA1P07900 732 aaKnown RBP15.28■□□□□ 0.04
AFF3-215ENST00000498090 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
AFF3-215ENST00000498090 PTF1AQ7RTS3 328 aa15.28■□□□□ 0.04
AFF3-215ENST00000498090 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
AFF3-215ENST00000498090 HOXB7P09629 217 aa15.28■□□□□ 0.04
AFF3-215ENST00000498090 FMNL2Q96PY5 1086 aa15.28■□□□□ 0.04
AFF3-215ENST00000498090 CLEC17AQ6ZS10 378 aa15.27■□□□□ 0.03
AFF3-215ENST00000498090 NECTIN2Q92692 538 aa15.27■□□□□ 0.03
AFF3-215ENST00000498090 STK31Q9BXU1 1019 aa15.27■□□□□ 0.03
AFF3-215ENST00000498090 CHMP4AQ9BY43 222 aa15.27■□□□□ 0.03
AFF3-215ENST00000498090 OSBPL3Q9H4L5 887 aa15.27■□□□□ 0.03
AFF3-215ENST00000498090 REC8O95072 547 aa15.26■□□□□ 0.03
AFF3-215ENST00000498090 PTCD1O75127 700 aaKnown RBP15.25■□□□□ 0.03
AFF3-215ENST00000498090 MRE11P49959 708 aa15.25■□□□□ 0.03
AFF3-215ENST00000498090 HDGFL1Q5TGJ6 251 aa15.25■□□□□ 0.03
AFF3-215ENST00000498090 CCDC30Q5VVM6 783 aa15.25■□□□□ 0.03
AFF3-215ENST00000498090 LAMB4A4D0S4 1761 aa15.25■□□□□ 0.03
AFF3-215ENST00000498090 GOLGA6L22H0YM25 854 aa15.25■□□□□ 0.03
AFF3-215ENST00000498090 GNAI3P08754 354 aa15.25■□□□□ 0.03
AFF3-215ENST00000498090 EIF2S2P20042 333 aaKnown RBP15.25■□□□□ 0.03
AFF3-215ENST00000498090 TNPO1Q92973 898 aaKnown RBP15.25■□□□□ 0.03
AFF3-215ENST00000498090 SLC4A9Q96Q91 983 aa15.25■□□□□ 0.03
AFF3-215ENST00000498090 SBF2Q86WG5 1849 aa15.24■□□□□ 0.03
AFF3-215ENST00000498090 GNAI2P04899 355 aa15.24■□□□□ 0.03
AFF3-215ENST00000498090 SNRPA1P09661 255 aaKnown RBP15.24■□□□□ 0.03
AFF3-215ENST00000498090 MEIS3Q99687 375 aa15.24■□□□□ 0.03
AFF3-215ENST00000498090 USP26Q9BXU7 913 aa15.24■□□□□ 0.03
AFF3-215ENST00000498090 USP16Q9Y5T5 823 aa15.24■□□□□ 0.03
AFF3-215ENST00000498090 PXDNLA1KZ92 1463 aa15.23■□□□□ 0.03
AFF3-215ENST00000498090 CWC22Q9HCG8 908 aaKnown RBP15.23■□□□□ 0.03
AFF3-215ENST00000498090 BTAF1O14981 1849 aa15.23■□□□□ 0.03
AFF3-215ENST00000498090 PALLDQ8WX93 1383 aa15.22■□□□□ 0.03
AFF3-215ENST00000498090 TJP1Q07157 1748 aa15.22■□□□□ 0.03
AFF3-215ENST00000498090 NUCB2P80303 420 aa15.22■□□□□ 0.03
AFF3-215ENST00000498090 G2E3Q7L622 706 aa15.22■□□□□ 0.03
AFF3-215ENST00000498090 CHPF2Q9P2E5 772 aa15.22■□□□□ 0.03
AFF3-215ENST00000498090 ST18O60284 1047 aa15.22■□□□□ 0.03
AFF3-215ENST00000498090 ANXA1P04083 346 aa15.22■□□□□ 0.03
AFF3-215ENST00000498090 SDSP20132 328 aa15.22■□□□□ 0.03
AFF3-215ENST00000498090 PROSER3Q2NL68 480 aa15.22■□□□□ 0.03
AFF3-215ENST00000498090 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
AFF3-215ENST00000498090 PDIA6Q15084 440 aa15.21■□□□□ 0.03
AFF3-215ENST00000498090 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
AFF3-215ENST00000498090 DNAJC10Q8IXB1 793 aa15.21■□□□□ 0.03
AFF3-215ENST00000498090 VSIG10Q8N0Z9 540 aa15.21■□□□□ 0.03
AFF3-215ENST00000498090 CICQ96RK0 1608 aaPredicted RBP15.21■□□□□ 0.02
AFF3-215ENST00000498090 ERC2O15083 957 aa15.2■□□□□ 0.02
AFF3-215ENST00000498090 SRCIN1Q9C0H9 1055 aa15.2■□□□□ 0.02
AFF3-215ENST00000498090 EPB41L2O43491 1005 aaKnown RBP15.19■□□□□ 0.02
AFF3-215ENST00000498090 XRCC6P12956 609 aaKnown RBP eCLIP15.19■□□□□ 0.02
AFF3-215ENST00000498090 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
AFF3-215ENST00000498090 PIP4K2AP48426 406 aaPredicted RBP15.19■□□□□ 0.02
AFF3-215ENST00000498090 MCM2P49736 904 aa15.19■□□□□ 0.02
AFF3-215ENST00000498090 FLIIQ13045 1269 aa15.19■□□□□ 0.02
AFF3-215ENST00000498090 LRP10Q7Z4F1 713 aa15.19■□□□□ 0.02
AFF3-215ENST00000498090 C16orf71Q8IYS4 520 aaPredicted RBP15.19■□□□□ 0.02
AFF3-215ENST00000498090 SMARCC1Q92922 1105 aaPredicted RBP15.19■□□□□ 0.02
AFF3-215ENST00000498090 BCL11BQ9C0K0 894 aaPredicted RBP15.19■□□□□ 0.02
AFF3-215ENST00000498090 PHAXQ9H814 394 aaKnown RBP15.19■□□□□ 0.02
AFF3-215ENST00000498090 AOX1Q06278 1338 aa15.18■□□□□ 0.02
AFF3-215ENST00000498090 IBTKQ9P2D0 1353 aaPredicted RBP15.18■□□□□ 0.02
AFF3-215ENST00000498090 LOC102724428A0A0B4J2F2 783 aa15.18■□□□□ 0.02
AFF3-215ENST00000498090 CD2BP2O95400 341 aaKnown RBP15.18■□□□□ 0.02
AFF3-215ENST00000498090 PDE1AP54750 535 aa15.18■□□□□ 0.02
AFF3-215ENST00000498090 SIK1P57059 783 aa15.18■□□□□ 0.02
AFF3-215ENST00000498090 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
AFF3-215ENST00000498090 DDX21Q9NR30 783 aaKnown RBP eCLIP15.18■□□□□ 0.02
AFF3-215ENST00000498090 KAT6BQ8WYB5 2073 aa15.18■□□□□ 0.02
AFF3-215ENST00000498090 NBPF26B4DH59 902 aa15.17■□□□□ 0.02
AFF3-215ENST00000498090 KCNA4P22459 653 aa15.17■□□□□ 0.02
AFF3-215ENST00000498090 ATP8B2P98198 1209 aa15.17■□□□□ 0.02
AFF3-215ENST00000498090 ITPK1Q13572 414 aa15.17■□□□□ 0.02
AFF3-215ENST00000498090 NBPF14Q5TI25 921 aa15.17■□□□□ 0.02
AFF3-215ENST00000498090 NBPF10Q6P3W6 841 aaKnown RBP15.17■□□□□ 0.02
AFF3-215ENST00000498090 CCDC125Q86Z20 511 aa15.17■□□□□ 0.02
AFF3-215ENST00000498090 NBPF15Q8N660 670 aa15.17■□□□□ 0.02
AFF3-215ENST00000498090 LRRCC1Q9C099 1032 aa15.17■□□□□ 0.02
AFF3-215ENST00000498090 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
AFF3-215ENST00000498090 ZNF831Q5JPB2 1677 aa15.16■□□□□ 0.02
AFF3-215ENST00000498090 TRIM37O94972 964 aa15.16■□□□□ 0.02
AFF3-215ENST00000498090 A1BGP04217 495 aa15.16■□□□□ 0.02
AFF3-215ENST00000498090 GZF1Q9H116 711 aaPredicted RBP15.16■□□□□ 0.02
AFF3-215ENST00000498090 GRPEL1Q9HAV7 217 aa15.16■□□□□ 0.02
AFF3-215ENST00000498090 ERBB4Q15303 1308 aa15.16■□□□□ 0.02
AFF3-215ENST00000498090 CYP19A1P11511 503 aaPredicted RBP15.16■□□□□ 0.02
AFF3-215ENST00000498090 MCCP23508 829 aa15.16■□□□□ 0.02
AFF3-215ENST00000498090 FKBP5Q13451 457 aaPredicted RBP15.16■□□□□ 0.02
AFF3-215ENST00000498090 DEFB132Q7Z7B7 95 aa15.16■□□□□ 0.02
AFF3-215ENST00000498090 LY75O60449 1722 aa15.15■□□□□ 0.02
AFF3-215ENST00000498090 MYL6BP14649 208 aa15.15■□□□□ 0.02
AFF3-215ENST00000498090 ATP6V1AP38606 617 aa15.15■□□□□ 0.02
AFF3-215ENST00000498090 ANAPC15P60006 121 aa15.15■□□□□ 0.02
AFF3-215ENST00000498090 OTUD7AQ8TE49 926 aaPredicted RBP15.15■□□□□ 0.02
AFF3-215ENST00000498090 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
AFF3-215ENST00000498090 SALL3Q9BXA9 1300 aa15.15■□□□□ 0.02
AFF3-215ENST00000498090 F6X3S4 739 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms