RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 GIGYF1O75420 1035 aaPredicted RBP20.54■□□□□ 0.88
TNRC18-210ENST00000497663 ZNF526Q8TF50 670 aaPredicted RBP20.54■□□□□ 0.88
TNRC18-210ENST00000497663 SLC52A2Q9HAB3 445 aa20.54■□□□□ 0.88
TNRC18-210ENST00000497663 SCN11AQ9UI33 1791 aa20.54■□□□□ 0.88
TNRC18-210ENST00000497663 C10orf71Q711Q0 1435 aa20.53■□□□□ 0.88
TNRC18-210ENST00000497663 RFC4P35249 363 aa20.53■□□□□ 0.88
TNRC18-210ENST00000497663 DDR1Q08345 913 aa20.53■□□□□ 0.88
TNRC18-210ENST00000497663 N4BP2Q86UW6 1770 aaPredicted RBP20.52■□□□□ 0.88
TNRC18-210ENST00000497663 DIAPH1O60610 1272 aaKnown RBP20.52■□□□□ 0.88
TNRC18-210ENST00000497663 DPEP1P16444 411 aa20.52■□□□□ 0.88
TNRC18-210ENST00000497663 NLGN1Q8N2Q7 840 aa20.52■□□□□ 0.88
TNRC18-210ENST00000497663 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
TNRC18-210ENST00000497663 CEP350Q5VT06 3117 aa20.51■□□□□ 0.87
TNRC18-210ENST00000497663 MAMSTRQ6ZN01 415 aa20.51■□□□□ 0.87
TNRC18-210ENST00000497663 KIF13BQ9NQT8 1826 aa20.5■□□□□ 0.87
TNRC18-210ENST00000497663 MRC1P22897 1456 aa20.5■□□□□ 0.87
TNRC18-210ENST00000497663 KCPQ6ZWJ8 1503 aa20.5■□□□□ 0.87
TNRC18-210ENST00000497663 KCNA3P22001 575 aa20.5■□□□□ 0.87
TNRC18-210ENST00000497663 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.5■□□□□ 0.87
TNRC18-210ENST00000497663 USP42Q9H9J4 1324 aaKnown RBP20.5■□□□□ 0.87
TNRC18-210ENST00000497663 POTEJP0CG39 1038 aa20.49■□□□□ 0.87
TNRC18-210ENST00000497663 CYP19A1P11511 503 aaPredicted RBP20.48■□□□□ 0.87
TNRC18-210ENST00000497663 SCUBE2Q9NQ36 999 aa20.48■□□□□ 0.87
TNRC18-210ENST00000497663 BCS1LQ9Y276 419 aa20.48■□□□□ 0.87
TNRC18-210ENST00000497663 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
TNRC18-210ENST00000497663 SOS1Q07889 1333 aaPredicted RBP20.47■□□□□ 0.87
TNRC18-210ENST00000497663 U2SURPO15042 1029 aaKnown RBP20.46■□□□□ 0.87
TNRC18-210ENST00000497663 TGFB2P61812 414 aa20.46■□□□□ 0.87
TNRC18-210ENST00000497663 USPL1Q5W0Q7 1092 aa20.46■□□□□ 0.87
TNRC18-210ENST00000497663 VSIG10Q8N0Z9 540 aa20.46■□□□□ 0.87
TNRC18-210ENST00000497663 IL17REQ8NFR9 667 aa20.46■□□□□ 0.87
TNRC18-210ENST00000497663 CCDC87Q9NVE4 849 aa20.46■□□□□ 0.87
TNRC18-210ENST00000497663 PARP3Q9Y6F1 533 aa20.46■□□□□ 0.87
TNRC18-210ENST00000497663 LHX8Q68G74 356 aa20.45■□□□□ 0.86
TNRC18-210ENST00000497663 PHACTR3Q96KR7 559 aa20.45■□□□□ 0.86
TNRC18-210ENST00000497663 BCL2L12Q9HB09 334 aa20.45■□□□□ 0.86
TNRC18-210ENST00000497663 NPC1L1Q9UHC9 1359 aa20.45■□□□□ 0.86
TNRC18-210ENST00000497663 POLRMTO00411 1230 aaKnown RBP20.44■□□□□ 0.86
TNRC18-210ENST00000497663 PDE4AP27815 886 aa20.44■□□□□ 0.86
TNRC18-210ENST00000497663 TM4SF1P30408 202 aa20.44■□□□□ 0.86
TNRC18-210ENST00000497663 CHRNA5P30532 468 aa20.44■□□□□ 0.86
TNRC18-210ENST00000497663 TMC2Q8TDI7 906 aa20.44■□□□□ 0.86
TNRC18-210ENST00000497663 GPBP1L1Q9HC44 474 aaPredicted RBP20.44■□□□□ 0.86
TNRC18-210ENST00000497663 VIRMAQ69YN4 1812 aaKnown RBP20.43■□□□□ 0.86
TNRC18-210ENST00000497663 KCNQ3O43525 872 aa20.42■□□□□ 0.86
TNRC18-210ENST00000497663 FCHSD2O94868 740 aa20.41■□□□□ 0.86
TNRC18-210ENST00000497663 ARHGAP27Q6ZUM4 889 aa20.41■□□□□ 0.86
TNRC18-210ENST00000497663 KIF3CO14782 793 aa20.4■□□□□ 0.86
TNRC18-210ENST00000497663 BRCA1P38398 1863 aaKnown RBP20.4■□□□□ 0.86
TNRC18-210ENST00000497663 NFIXQ14938 502 aa20.4■□□□□ 0.86
TNRC18-210ENST00000497663 ZNF496Q96IT1 587 aaPredicted RBP20.4■□□□□ 0.86
TNRC18-210ENST00000497663 CRISPLD2Q9H0B8 497 aa20.4■□□□□ 0.86
TNRC18-210ENST00000497663 COL15A1P39059 1388 aa20.39■□□□□ 0.85
TNRC18-210ENST00000497663 CANXP27824 592 aaKnown RBP20.39■□□□□ 0.85
TNRC18-210ENST00000497663 RSPH6AQ9H0K4 717 aa20.38■□□□□ 0.85
TNRC18-210ENST00000497663 NARFQ9UHQ1 456 aa20.38■□□□□ 0.85
TNRC18-210ENST00000497663 UBR2Q8IWV8 1755 aa20.38■□□□□ 0.85
TNRC18-210ENST00000497663 ZPR1O75312 459 aa20.37■□□□□ 0.85
TNRC18-210ENST00000497663 PRKAR2BP31323 418 aa20.37■□□□□ 0.85
TNRC18-210ENST00000497663 GPHNQ9NQX3 736 aaPredicted RBP20.37■□□□□ 0.85
TNRC18-210ENST00000497663 CARMIL3Q8ND23 1372 aa20.36■□□□□ 0.85
TNRC18-210ENST00000497663 GNAT3A8MTJ3 354 aa20.36■□□□□ 0.85
TNRC18-210ENST00000497663 PPP2R1AP30153 589 aa20.36■□□□□ 0.85
TNRC18-210ENST00000497663 LARP6Q9BRS8 491 aaKnown RBP20.36■□□□□ 0.85
TNRC18-210ENST00000497663 EIF5P55010 431 aaKnown RBP20.35■□□□□ 0.85
TNRC18-210ENST00000497663 ZNF790Q6PG37 636 aa20.35■□□□□ 0.85
TNRC18-210ENST00000497663 WDR70Q9NW82 654 aa20.35■□□□□ 0.85
TNRC18-210ENST00000497663 PIM2Q9P1W9 311 aa20.35■□□□□ 0.85
TNRC18-210ENST00000497663 PRAMEF22A3QJZ6 481 aa20.34■□□□□ 0.85
TNRC18-210ENST00000497663 C2orf72A6NCS6 295 aa20.34■□□□□ 0.85
TNRC18-210ENST00000497663 PRELPP51888 382 aa20.34■□□□□ 0.85
TNRC18-210ENST00000497663 TMEM92Q6UXU6 159 aa20.34■□□□□ 0.85
TNRC18-210ENST00000497663 BICDL1Q6ZP65 573 aa20.34■□□□□ 0.85
TNRC18-210ENST00000497663 GAS2L2Q8NHY3 880 aa20.34■□□□□ 0.85
TNRC18-210ENST00000497663 NMRK2Q9NPI5 230 aa20.34■□□□□ 0.85
TNRC18-210ENST00000497663 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
TNRC18-210ENST00000497663 CEMIPQ8WUJ3 1361 aa20.34■□□□□ 0.85
TNRC18-210ENST00000497663 A1BGP04217 495 aa20.33■□□□□ 0.85
TNRC18-210ENST00000497663 PIP4K2AP48426 406 aaPredicted RBP20.33■□□□□ 0.85
TNRC18-210ENST00000497663 DALRD3Q5D0E6 543 aaKnown RBP20.33■□□□□ 0.85
TNRC18-210ENST00000497663 C9orf131Q5VYM1 1079 aa20.33■□□□□ 0.85
TNRC18-210ENST00000497663 CCDC24Q8N4L8 307 aa20.33■□□□□ 0.85
TNRC18-210ENST00000497663 HEG1Q9ULI3 1381 aa20.33■□□□□ 0.84
TNRC18-210ENST00000497663 AFDNP55196 1824 aaKnown RBP20.32■□□□□ 0.84
TNRC18-210ENST00000497663 SERPINB2P05120 415 aa20.32■□□□□ 0.84
TNRC18-210ENST00000497663 TEFQ10587 303 aa20.32■□□□□ 0.84
TNRC18-210ENST00000497663 DCTN1Q14203 1278 aa20.32■□□□□ 0.84
TNRC18-210ENST00000497663 TTC5Q8N0Z6 440 aa20.32■□□□□ 0.84
TNRC18-210ENST00000497663 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
TNRC18-210ENST00000497663 MCM10Q7L590 875 aa20.31■□□□□ 0.84
TNRC18-210ENST00000497663 DDX27Q96GQ7 796 aaKnown RBP20.31■□□□□ 0.84
TNRC18-210ENST00000497663 TBC1D2BQ9UPU7 963 aa20.31■□□□□ 0.84
TNRC18-210ENST00000497663 RASSF7Q02833 373 aa20.3■□□□□ 0.84
TNRC18-210ENST00000497663 SLAIN1Q8ND83 568 aa20.3■□□□□ 0.84
TNRC18-210ENST00000497663 ZNF330Q9Y3S2 320 aaPredicted RBP20.3■□□□□ 0.84
TNRC18-210ENST00000497663 NRXN2Q9P2S2 1712 aa20.3■□□□□ 0.84
TNRC18-210ENST00000497663 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
TNRC18-210ENST00000497663 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
TNRC18-210ENST00000497663 ARFGEF1Q9Y6D6 1849 aa20.29■□□□□ 0.84
TNRC18-210ENST00000497663 STARD3NLO95772 234 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms