RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 ZIC2O95409 532 aaPredicted RBP11.69□□□□□ -0.54
VPS45-210ENST00000497638 INSM1Q01101 510 aaPredicted RBP11.69□□□□□ -0.54
VPS45-210ENST00000497638 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
VPS45-210ENST00000497638 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
VPS45-210ENST00000497638 MAGEB6P1A0A0J9YX57 407 aa11.68□□□□□ -0.54
VPS45-210ENST00000497638 ORAI2Q96SN7 254 aa11.68□□□□□ -0.54
VPS45-210ENST00000497638 PRAG1Q86YV5 1406 aa11.68□□□□□ -0.54
VPS45-210ENST00000497638 NPHP3Q7Z494 1330 aa11.67□□□□□ -0.54
VPS45-210ENST00000497638 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
VPS45-210ENST00000497638 SF3B2Q13435 895 aaKnown RBP11.67□□□□□ -0.54
VPS45-210ENST00000497638 FAM50AQ14320 339 aaKnown RBP11.67□□□□□ -0.54
VPS45-210ENST00000497638 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
VPS45-210ENST00000497638 KLF16Q9BXK1 252 aaPredicted RBP11.67□□□□□ -0.54
VPS45-210ENST00000497638 ZFAND3Q9H8U3 227 aa11.67□□□□□ -0.54
VPS45-210ENST00000497638 RALGAPBQ86X10 1494 aa11.66□□□□□ -0.54
VPS45-210ENST00000497638 GRM5P41594 1212 aa11.66□□□□□ -0.54
VPS45-210ENST00000497638 ITPKCQ96DU7 683 aa11.66□□□□□ -0.54
VPS45-210ENST00000497638 GLI3P10071 1580 aa11.66□□□□□ -0.54
VPS45-210ENST00000497638 NEXMIFQ5QGS0 1516 aa11.65□□□□□ -0.54
VPS45-210ENST00000497638 NR3C2P08235 984 aa11.65□□□□□ -0.54
VPS45-210ENST00000497638 VEGFBP49765 207 aa11.65□□□□□ -0.54
VPS45-210ENST00000497638 SKIV2LQ15477 1246 aaKnown RBP11.65□□□□□ -0.54
VPS45-210ENST00000497638 LCE2CQ5TA81 110 aa11.65□□□□□ -0.54
VPS45-210ENST00000497638 VASH1Q7L8A9 365 aaPredicted RBP11.65□□□□□ -0.54
VPS45-210ENST00000497638 SH3RF1Q7Z6J0 888 aa11.65□□□□□ -0.54
VPS45-210ENST00000497638 DEFB132Q7Z7B7 95 aa11.65□□□□□ -0.54
VPS45-210ENST00000497638 CARD14Q9BXL6 1004 aa11.65□□□□□ -0.54
VPS45-210ENST00000497638 KDM4CQ9H3R0 1056 aa11.65□□□□□ -0.54
VPS45-210ENST00000497638 GPBP1L1Q9HC44 474 aaPredicted RBP11.65□□□□□ -0.54
VPS45-210ENST00000497638 NUP155O75694 1391 aa11.65□□□□□ -0.55
VPS45-210ENST00000497638 ROCK1Q13464 1354 aa11.65□□□□□ -0.55
VPS45-210ENST00000497638 PXDNQ92626 1479 aa11.64□□□□□ -0.55
VPS45-210ENST00000497638 HFM1A2PYH4 1435 aa11.64□□□□□ -0.55
VPS45-210ENST00000497638 SH3BP5LQ7L8J4 393 aa11.64□□□□□ -0.55
VPS45-210ENST00000497638 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
VPS45-210ENST00000497638 SLIT2O94813 1529 aa11.64□□□□□ -0.55
VPS45-210ENST00000497638 ROBO2Q9HCK4 1378 aa11.64□□□□□ -0.55
VPS45-210ENST00000497638 CDC42BPGQ6DT37 1551 aa11.63□□□□□ -0.55
VPS45-210ENST00000497638 BRWD3Q6RI45 1802 aa11.63□□□□□ -0.55
VPS45-210ENST00000497638 FSHRP23945 695 aa11.63□□□□□ -0.55
VPS45-210ENST00000497638 C6orf118Q5T5N4 469 aa11.63□□□□□ -0.55
VPS45-210ENST00000497638 NPAS3Q8IXF0 933 aa11.63□□□□□ -0.55
VPS45-210ENST00000497638 GPKOWQ92917 476 aaPredicted RBP eCLIP11.63□□□□□ -0.55
VPS45-210ENST00000497638 DDRGK1Q96HY6 314 aa11.63□□□□□ -0.55
VPS45-210ENST00000497638 UPP2O95045 317 aa11.62□□□□□ -0.55
VPS45-210ENST00000497638 IRF7Q92985 503 aa11.62□□□□□ -0.55
VPS45-210ENST00000497638 C1QTNF2Q9BXJ5 285 aa11.62□□□□□ -0.55
VPS45-210ENST00000497638 STK17AQ9UEE5 414 aa11.62□□□□□ -0.55
VPS45-210ENST00000497638 LRPPRCP42704 1394 aaKnown RBP11.62□□□□□ -0.55
VPS45-210ENST00000497638 SOBPA7XYQ1 873 aa11.61□□□□□ -0.55
VPS45-210ENST00000497638 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
VPS45-210ENST00000497638 PROCA1Q8NCQ7 364 aaPredicted RBP11.61□□□□□ -0.55
VPS45-210ENST00000497638 LRRN4Q8WUT4 740 aa11.61□□□□□ -0.55
VPS45-210ENST00000497638 FAM117AQ9C073 453 aa11.61□□□□□ -0.55
VPS45-210ENST00000497638 ESCO1Q5FWF5 840 aa11.6□□□□□ -0.55
VPS45-210ENST00000497638 TRMT44Q8IYL2 757 aaKnown RBP11.6□□□□□ -0.55
VPS45-210ENST00000497638 SEPT12Q8IYM1 358 aa11.6□□□□□ -0.55
VPS45-210ENST00000497638 MAP4K5Q9Y4K4 846 aa11.6□□□□□ -0.55
VPS45-210ENST00000497638 USP32Q8NFA0 1604 aa11.6□□□□□ -0.55
VPS45-210ENST00000497638 BMP2P12643 396 aa11.59□□□□□ -0.55
VPS45-210ENST00000497638 BAG6P46379 1132 aa11.59□□□□□ -0.55
VPS45-210ENST00000497638 CLTCL1P53675 1640 aa11.59□□□□□ -0.55
VPS45-210ENST00000497638 LOC105371045A0A1W2PR82 267 aa11.58□□□□□ -0.56
VPS45-210ENST00000497638 MAN1A2O60476 641 aa11.58□□□□□ -0.56
VPS45-210ENST00000497638 VPS72Q15906 364 aa11.58□□□□□ -0.56
VPS45-210ENST00000497638 ARHGAP9Q9BRR9 750 aa11.58□□□□□ -0.56
VPS45-210ENST00000497638 FKBPLQ9UIM3 349 aa11.58□□□□□ -0.56
VPS45-210ENST00000497638 KIF1BO60333 1816 aa11.58□□□□□ -0.56
VPS45-210ENST00000497638 H3BM21 787 aa11.57□□□□□ -0.56
VPS45-210ENST00000497638 FOXO3O43524 673 aa11.57□□□□□ -0.56
VPS45-210ENST00000497638 GMPRP36959 345 aa11.57□□□□□ -0.56
VPS45-210ENST00000497638 XPCQ01831 940 aaPredicted RBP11.57□□□□□ -0.56
VPS45-210ENST00000497638 ERFEQ4G0M1 354 aa11.57□□□□□ -0.56
VPS45-210ENST00000497638 PDXDC2PQ6P474 469 aa11.57□□□□□ -0.56
VPS45-210ENST00000497638 KRT27Q7Z3Y8 459 aa11.57□□□□□ -0.56
VPS45-210ENST00000497638 CCDC116Q8IYX3 515 aa11.57□□□□□ -0.56
VPS45-210ENST00000497638 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
VPS45-210ENST00000497638 NWD2Q9ULI1 1742 aa11.57□□□□□ -0.56
VPS45-210ENST00000497638 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
VPS45-210ENST00000497638 AP1G2O75843 785 aa11.56□□□□□ -0.56
VPS45-210ENST00000497638 NR6A1Q15406 480 aa11.56□□□□□ -0.56
VPS45-210ENST00000497638 ZBTB33Q86T24 672 aa11.56□□□□□ -0.56
VPS45-210ENST00000497638 LINC00528Q8N1L1 170 aa11.56□□□□□ -0.56
VPS45-210ENST00000497638 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
VPS45-210ENST00000497638 SPATA31A3Q5VYP0 1347 aa11.56□□□□□ -0.56
VPS45-210ENST00000497638 KIF1AQ12756 1690 aa11.55□□□□□ -0.56
VPS45-210ENST00000497638 MEIOBQ8N635 442 aa11.55□□□□□ -0.56
VPS45-210ENST00000497638 PLCH1Q4KWH8 1693 aa11.55□□□□□ -0.56
VPS45-210ENST00000497638 NAIPQ13075 1403 aa11.54□□□□□ -0.56
VPS45-210ENST00000497638 PPP2R2DQ66LE6 453 aa11.54□□□□□ -0.56
VPS45-210ENST00000497638 RGPD1P0DJD0 1748 aa11.54□□□□□ -0.56
VPS45-210ENST00000497638 SLC10A4Q96EP9 437 aa11.53□□□□□ -0.56
VPS45-210ENST00000497638 CCDC9Q9Y3X0 531 aaKnown RBP11.53□□□□□ -0.56
VPS45-210ENST00000497638 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
VPS45-210ENST00000497638 DISP2A7MBM2 1401 aa11.52□□□□□ -0.56
VPS45-210ENST00000497638 TECPR2O15040 1411 aa11.52□□□□□ -0.56
VPS45-210ENST00000497638 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.56
VPS45-210ENST00000497638 TSEN34Q9BSV6 310 aaKnown RBP11.52□□□□□ -0.57
VPS45-210ENST00000497638 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
VPS45-210ENST00000497638 YY1P25490 414 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms