RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 SIK1P57059 783 aa15.23■□□□□ 0.03
HPS1-213ENST00000497527 KIF6Q6ZMV9 814 aa15.23■□□□□ 0.03
HPS1-213ENST00000497527 USP44Q9H0E7 712 aa15.23■□□□□ 0.03
HPS1-213ENST00000497527 C9orf78Q9NZ63 289 aaPredicted RBP15.23■□□□□ 0.03
HPS1-213ENST00000497527 HMGB2P26583 209 aaKnown RBP15.22■□□□□ 0.03
HPS1-213ENST00000497527 ATP6V1AP38606 617 aa15.22■□□□□ 0.03
HPS1-213ENST00000497527 IL6STP40189 918 aaPredicted RBP15.22■□□□□ 0.03
HPS1-213ENST00000497527 CEP85Q6P2H3 762 aa15.22■□□□□ 0.03
HPS1-213ENST00000497527 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
HPS1-213ENST00000497527 UTYO14607 1347 aa15.2■□□□□ 0.02
HPS1-213ENST00000497527 NUP98P52948 1817 aa15.2■□□□□ 0.02
HPS1-213ENST00000497527 HSP90AB3PQ58FF7 597 aa15.2■□□□□ 0.02
HPS1-213ENST00000497527 FAM196AQ6ZSG2 479 aa15.2■□□□□ 0.02
HPS1-213ENST00000497527 SLC4A9Q96Q91 983 aa15.2■□□□□ 0.02
HPS1-213ENST00000497527 MYD88Q99836 296 aa15.2■□□□□ 0.02
HPS1-213ENST00000497527 TAF1LQ8IZX4 1826 aa15.2■□□□□ 0.02
HPS1-213ENST00000497527 NEURL1BA8MQ27 555 aa15.19■□□□□ 0.02
HPS1-213ENST00000497527 GRM8O00222 908 aa15.19■□□□□ 0.02
HPS1-213ENST00000497527 KCNQ2O43526 872 aa15.19■□□□□ 0.02
HPS1-213ENST00000497527 PIP4K2AP48426 406 aaPredicted RBP15.19■□□□□ 0.02
HPS1-213ENST00000497527 ATP8B2P98198 1209 aa15.19■□□□□ 0.02
HPS1-213ENST00000497527 KRT27Q7Z3Y8 459 aa15.19■□□□□ 0.02
HPS1-213ENST00000497527 DCTPP1Q9H773 170 aa15.19■□□□□ 0.02
HPS1-213ENST00000497527 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
HPS1-213ENST00000497527 PDZRN3Q9UPQ7 1066 aa15.19■□□□□ 0.02
HPS1-213ENST00000497527 LRRFIP2Q9Y608 721 aaKnown RBP15.19■□□□□ 0.02
HPS1-213ENST00000497527 MYH14Q7Z406 1995 aaKnown RBP15.18■□□□□ 0.02
HPS1-213ENST00000497527 SIRT2Q8IXJ6 389 aa15.18■□□□□ 0.02
HPS1-213ENST00000497527 COL15A1P39059 1388 aa15.17■□□□□ 0.02
HPS1-213ENST00000497527 GCKRQ14397 625 aa15.17■□□□□ 0.02
HPS1-213ENST00000497527 CWF19L2Q2TBE0 894 aaKnown RBP15.17■□□□□ 0.02
HPS1-213ENST00000497527 TTLL7Q6ZT98 887 aa15.17■□□□□ 0.02
HPS1-213ENST00000497527 BCL11BQ9C0K0 894 aaPredicted RBP15.17■□□□□ 0.02
HPS1-213ENST00000497527 ZBTB1Q9Y2K1 713 aa15.17■□□□□ 0.02
HPS1-213ENST00000497527 ZNF330Q9Y3S2 320 aaPredicted RBP15.17■□□□□ 0.02
HPS1-213ENST00000497527 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
HPS1-213ENST00000497527 A0A087WZG4 1122 aa15.16■□□□□ 0.02
HPS1-213ENST00000497527 ERVV-1B6SEH8 477 aa15.16■□□□□ 0.02
HPS1-213ENST00000497527 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
HPS1-213ENST00000497527 NBPF7P0C2Y1 421 aaPredicted RBP15.16■□□□□ 0.02
HPS1-213ENST00000497527 NUCB1Q02818 461 aa15.16■□□□□ 0.02
HPS1-213ENST00000497527 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
HPS1-213ENST00000497527 CWC25Q9NXE8 425 aaPredicted RBP15.16■□□□□ 0.02
HPS1-213ENST00000497527 CNTNAP4Q9C0A0 1308 aa15.16■□□□□ 0.02
HPS1-213ENST00000497527 RXRBP28702 533 aa15.15■□□□□ 0.02
HPS1-213ENST00000497527 CRKLP46109 303 aaKnown RBP15.15■□□□□ 0.02
HPS1-213ENST00000497527 RGS3P49796 1198 aa15.15■□□□□ 0.02
HPS1-213ENST00000497527 TCIRG1Q13488 830 aa15.15■□□□□ 0.02
HPS1-213ENST00000497527 MTX1Q13505 466 aa15.15■□□□□ 0.02
HPS1-213ENST00000497527 ZBTB3Q9H5J0 574 aa15.15■□□□□ 0.02
HPS1-213ENST00000497527 BCORQ6W2J9 1755 aa15.15■□□□□ 0.02
HPS1-213ENST00000497527 RGL2O15211 777 aa15.14■□□□□ 0.01
HPS1-213ENST00000497527 EIF5P55010 431 aaKnown RBP15.14■□□□□ 0.01
HPS1-213ENST00000497527 TRIM28Q13263 835 aaKnown RBP15.14■□□□□ 0.01
HPS1-213ENST00000497527 ITPK1Q13572 414 aa15.14■□□□□ 0.01
HPS1-213ENST00000497527 HSP90AB4PQ58FF6 505 aa15.14■□□□□ 0.01
HPS1-213ENST00000497527 RC3H1Q5TC82 1133 aaKnown RBP15.14■□□□□ 0.01
HPS1-213ENST00000497527 GIGYF2Q6Y7W6 1299 aaKnown RBP15.14■□□□□ 0.01
HPS1-213ENST00000497527 CHD1LQ86WJ1 897 aa15.14■□□□□ 0.01
HPS1-213ENST00000497527 SSH3Q8TE77 659 aa15.14■□□□□ 0.01
HPS1-213ENST00000497527 ANKRD45Q5TZF3 282 aa15.13■□□□□ 0.01
HPS1-213ENST00000497527 INTS5Q6P9B9 1019 aaKnown RBP15.13■□□□□ 0.01
HPS1-213ENST00000497527 DZIP3Q86Y13 1208 aaKnown RBP15.13■□□□□ 0.01
HPS1-213ENST00000497527 ARXQ96QS3 562 aa15.13■□□□□ 0.01
HPS1-213ENST00000497527 ISCA1Q9BUE6 129 aa15.13■□□□□ 0.01
HPS1-213ENST00000497527 CCNL1Q9UK58 526 aaPredicted RBP15.13■□□□□ 0.01
HPS1-213ENST00000497527 MYH3P11055 1940 aa15.13■□□□□ 0.01
HPS1-213ENST00000497527 ATP5J2-PTCD1G3V325 749 aa15.12■□□□□ 0.01
HPS1-213ENST00000497527 POLA2Q14181 598 aa15.12■□□□□ 0.01
HPS1-213ENST00000497527 PPP1R42Q7Z4L9 355 aa15.12■□□□□ 0.01
HPS1-213ENST00000497527 SRGAP3O43295 1099 aa15.11■□□□□ 0.01
HPS1-213ENST00000497527 RAB11FIP3O75154 756 aa15.11■□□□□ 0.01
HPS1-213ENST00000497527 FAM182BQ5T319 152 aa15.11■□□□□ 0.01
HPS1-213ENST00000497527 ZNF652Q9Y2D9 606 aa15.11■□□□□ 0.01
HPS1-213ENST00000497527 C4BP0C0L5 1744 aa15.11■□□□□ 0.01
HPS1-213ENST00000497527 SCN7AQ01118 1682 aa15.1■□□□□ 0.01
HPS1-213ENST00000497527 PNMA6EA0A0J9YXQ4 647 aa15.1■□□□□ 0.01
HPS1-213ENST00000497527 H7C1W4 665 aa15.1■□□□□ 0.01
HPS1-213ENST00000497527 LINC00116Q8NCU8 138 aa15.1■□□□□ 0.01
HPS1-213ENST00000497527 SUCLG2Q96I99 432 aa15.1■□□□□ 0.01
HPS1-213ENST00000497527 LNPKQ9C0E8 428 aa15.1■□□□□ 0.01
HPS1-213ENST00000497527 RGPD3A6NKT7 1758 aaPredicted RBP15.09■□□□□ 0.01
HPS1-213ENST00000497527 RGPD4Q7Z3J3 1758 aa15.09■□□□□ 0.01
HPS1-213ENST00000497527 SLC27A3Q5K4L6 730 aa15.09■□□□□ 0.01
HPS1-213ENST00000497527 UBE3BQ7Z3V4 1068 aa15.09■□□□□ 0.01
HPS1-213ENST00000497527 ERC1Q8IUD2 1116 aa15.09■□□□□ 0.01
HPS1-213ENST00000497527 RPS6KA4O75676 772 aa15.08■□□□□ 0
HPS1-213ENST00000497527 PCCAP05165 728 aaPredicted RBP15.08■□□□□ 0
HPS1-213ENST00000497527 HSP90B1P14625 803 aaKnown RBP15.08■□□□□ 0
HPS1-213ENST00000497527 RABL6Q3YEC7 729 aaPredicted RBP15.08■□□□□ 0
HPS1-213ENST00000497527 LRRCC1Q9C099 1032 aa15.08■□□□□ 0
HPS1-213ENST00000497527 BICC1Q9H694 974 aaKnown RBP15.08■□□□□ 0
HPS1-213ENST00000497527 CDHR2Q9BYE9 1310 aa15.08■□□□□ 0
HPS1-213ENST00000497527 LAMB2P55268 1798 aa15.07■□□□□ 0
HPS1-213ENST00000497527 SURF6O75683 361 aaKnown RBP15.07■□□□□ 0
HPS1-213ENST00000497527 CASP7P55210 303 aa15.07■□□□□ 0
HPS1-213ENST00000497527 FAM161AQ3B820 660 aa15.07■□□□□ 0
HPS1-213ENST00000497527 PARP10Q53GL7 1025 aa15.07■□□□□ 0
HPS1-213ENST00000497527 CLEC4GQ6UXB4 293 aa15.07■□□□□ 0
HPS1-213ENST00000497527 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms