RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 MARK1Q9P0L2 795 aa7.84□□□□□ -1.15
CBX3-208ENST00000497498 TFIP11Q9UBB9 837 aaKnown RBP7.84□□□□□ -1.15
CBX3-208ENST00000497498 PSMA6P60900 246 aaKnown RBP7.83□□□□□ -1.16
CBX3-208ENST00000497498 SUZ12Q15022 739 aaKnown RBP7.83□□□□□ -1.16
CBX3-208ENST00000497498 SH3PXD2AQ5TCZ1 1133 aa7.83□□□□□ -1.16
CBX3-208ENST00000497498 ZNF468Q5VIY5 522 aaPredicted RBP7.83□□□□□ -1.16
CBX3-208ENST00000497498 C1orf53Q5VUE5 145 aa7.83□□□□□ -1.16
CBX3-208ENST00000497498 LRRC69Q6ZNQ3 347 aa7.83□□□□□ -1.16
CBX3-208ENST00000497498 FCHSD1Q86WN1 690 aa7.83□□□□□ -1.16
CBX3-208ENST00000497498 MAFBQ9Y5Q3 323 aaPredicted RBP7.83□□□□□ -1.16
CBX3-208ENST00000497498 AMPD1P23109 780 aa7.82□□□□□ -1.16
CBX3-208ENST00000497498 ALYREFQ86V81 257 aaKnown RBP7.82□□□□□ -1.16
CBX3-208ENST00000497498 COL8A1P27658 744 aa7.81□□□□□ -1.16
CBX3-208ENST00000497498 DGKGP49619 791 aa7.81□□□□□ -1.16
CBX3-208ENST00000497498 TSEN2Q8NCE0 465 aaKnown RBP7.81□□□□□ -1.16
CBX3-208ENST00000497498 ZNF594Q96JF6 807 aaPredicted RBP7.81□□□□□ -1.16
CBX3-208ENST00000497498 SFI1A8K8P3 1242 aa7.8□□□□□ -1.16
CBX3-208ENST00000497498 GNB5O14775 395 aa7.8□□□□□ -1.16
CBX3-208ENST00000497498 MSTNO14793 375 aa7.8□□□□□ -1.16
CBX3-208ENST00000497498 C21orf2O43822 256 aa7.8□□□□□ -1.16
CBX3-208ENST00000497498 RASA1P20936 1047 aa7.8□□□□□ -1.16
CBX3-208ENST00000497498 PCBP4P57723 403 aaKnown RBP7.8□□□□□ -1.16
CBX3-208ENST00000497498 CHSY3Q70JA7 882 aa7.8□□□□□ -1.16
CBX3-208ENST00000497498 RHPN1Q8TCX5 695 aa7.8□□□□□ -1.16
CBX3-208ENST00000497498 SPOCK3Q9BQ16 436 aa7.8□□□□□ -1.16
CBX3-208ENST00000497498 NEUROD4Q9HD90 331 aa7.8□□□□□ -1.16
CBX3-208ENST00000497498 PRR12Q9ULL5 1215 aa7.8□□□□□ -1.16
CBX3-208ENST00000497498 RBM19Q9Y4C8 960 aaKnown RBP7.8□□□□□ -1.16
CBX3-208ENST00000497498 LOC100996750A0A140TA64 210 aa7.79□□□□□ -1.16
CBX3-208ENST00000497498 KRBA1A5PL33 1030 aa7.79□□□□□ -1.16
CBX3-208ENST00000497498 PIK3R2O00459 728 aa7.79□□□□□ -1.16
CBX3-208ENST00000497498 STAG2Q8N3U4 1231 aa7.79□□□□□ -1.16
CBX3-208ENST00000497498 MDFIQ99750 246 aa7.79□□□□□ -1.16
CBX3-208ENST00000497498 KRTAP4-6Q9BYQ5 205 aa7.79□□□□□ -1.16
CBX3-208ENST00000497498 PPP1R12CQ9BZL4 782 aa7.79□□□□□ -1.16
CBX3-208ENST00000497498 CHMP3Q9Y3E7 222 aa7.79□□□□□ -1.16
CBX3-208ENST00000497498 HCN4Q9Y3Q4 1203 aa7.79□□□□□ -1.16
CBX3-208ENST00000497498 PPP1R12BO60237 982 aaPredicted RBP7.78□□□□□ -1.16
CBX3-208ENST00000497498 PROCP04070 461 aa7.78□□□□□ -1.16
CBX3-208ENST00000497498 SEC13P55735 322 aa7.78□□□□□ -1.16
CBX3-208ENST00000497498 KANK4Q5T7N3 995 aaPredicted RBP7.78□□□□□ -1.16
CBX3-208ENST00000497498 GAS2L2Q8NHY3 880 aa7.78□□□□□ -1.16
CBX3-208ENST00000497498 CALR3Q96L12 384 aaKnown RBP7.78□□□□□ -1.16
CBX3-208ENST00000497498 PHACTR1Q9C0D0 580 aa7.78□□□□□ -1.16
CBX3-208ENST00000497498 SUV39H2Q9H5I1 410 aa7.78□□□□□ -1.16
CBX3-208ENST00000497498 ATAD2Q6PL18 1390 aa7.77□□□□□ -1.17
CBX3-208ENST00000497498 SFSWAPQ12872 951 aaKnown RBP7.77□□□□□ -1.17
CBX3-208ENST00000497498 PTK7Q13308 1070 aa7.77□□□□□ -1.17
CBX3-208ENST00000497498 GRIN2CQ14957 1233 aa7.77□□□□□ -1.17
CBX3-208ENST00000497498 C2orf49Q9BVC5 232 aaPredicted RBP7.77□□□□□ -1.17
CBX3-208ENST00000497498 ANKIB1Q9P2G1 1089 aa7.77□□□□□ -1.17
CBX3-208ENST00000497498 SIN3BO75182 1162 aa7.76□□□□□ -1.17
CBX3-208ENST00000497498 KCNQ4P56696 695 aa7.76□□□□□ -1.17
CBX3-208ENST00000497498 CRTC2Q53ET0 693 aaPredicted RBP7.76□□□□□ -1.17
CBX3-208ENST00000497498 LARP1Q6PKG0 1096 aaKnown RBP7.76□□□□□ -1.17
CBX3-208ENST00000497498 SYT9Q86SS6 491 aa7.76□□□□□ -1.17
CBX3-208ENST00000497498 ELOA3CA0A087WX78 387 aaPredicted RBP7.75□□□□□ -1.17
CBX3-208ENST00000497498 ELOA3DA6NLF2 546 aaPredicted RBP7.75□□□□□ -1.17
CBX3-208ENST00000497498 ADARB2-AS1A8MUL3 147 aa7.75□□□□□ -1.17
CBX3-208ENST00000497498 ELOA3BQ3SY89 546 aa7.75□□□□□ -1.17
CBX3-208ENST00000497498 ZNF280CQ8ND82 737 aa7.75□□□□□ -1.17
CBX3-208ENST00000497498 ELOA3Q8NG57 546 aa7.75□□□□□ -1.17
CBX3-208ENST00000497498 SCG3Q8WXD2 468 aaKnown RBP7.75□□□□□ -1.17
CBX3-208ENST00000497498 HSH2DQ96JZ2 352 aa7.75□□□□□ -1.17
CBX3-208ENST00000497498 SUSD3Q96L08 255 aa7.75□□□□□ -1.17
CBX3-208ENST00000497498 SLC30A3Q99726 388 aa7.75□□□□□ -1.17
CBX3-208ENST00000497498 FAM196BA6NMK8 535 aa7.74□□□□□ -1.17
CBX3-208ENST00000497498 DPYDQ12882 1025 aa7.74□□□□□ -1.17
CBX3-208ENST00000497498 ALDH16A1Q8IZ83 802 aa7.74□□□□□ -1.17
CBX3-208ENST00000497498 BRD7Q9NPI1 651 aa7.74□□□□□ -1.17
CBX3-208ENST00000497498 NOP53Q9NZM5 478 aaKnown RBP7.74□□□□□ -1.17
CBX3-208ENST00000497498 TYRO3Q06418 890 aa7.73□□□□□ -1.17
CBX3-208ENST00000497498 SPEM2Q0P670 501 aa7.73□□□□□ -1.17
CBX3-208ENST00000497498 TNFRSF25Q93038 417 aa7.73□□□□□ -1.17
CBX3-208ENST00000497498 CEP63Q96MT8 703 aa7.73□□□□□ -1.17
CBX3-208ENST00000497498 VRTNQ9H8Y1 702 aa7.73□□□□□ -1.17
CBX3-208ENST00000497498 USP17L15C9J2P7 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L10C9JJH3 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L13C9JLJ4 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L12C9JPN9 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L11C9JVI0 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L21D6R901 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L18D6R9N7 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L22D6RA61 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L17D6RBQ6 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L19D6RCP7 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L20D6RJB6 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 ALAS2P22557 587 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 LMOD1P29536 600 aaPredicted RBP7.72□□□□□ -1.17
CBX3-208ENST00000497498 USP17L24Q0WX57 530 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 ANKMY2Q8IV38 441 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 TRIM11Q96F44 468 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 KCNH4Q9UQ05 1017 aa7.72□□□□□ -1.17
CBX3-208ENST00000497498 IGFBP4P22692 258 aa7.71□□□□□ -1.18
CBX3-208ENST00000497498 HIF1AQ16665 826 aa7.71□□□□□ -1.18
CBX3-208ENST00000497498 BTLAQ7Z6A9 289 aa7.71□□□□□ -1.18
CBX3-208ENST00000497498 CHMP7Q8WUX9 453 aaPredicted RBP7.71□□□□□ -1.18
CBX3-208ENST00000497498 ARXQ96QS3 562 aa7.71□□□□□ -1.18
CBX3-208ENST00000497498 HINFPQ9BQA5 517 aa7.71□□□□□ -1.18
CBX3-208ENST00000497498 NEUROD1Q13562 356 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms