RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 BCL2L13Q9BXK5 485 aa25.12■■□□□ 1.61
SCAMP3-209ENST00000497470 PXDNLA1KZ92 1463 aa25.12■■□□□ 1.61
SCAMP3-209ENST00000497470 TCERG1O14776 1098 aaKnown RBP25.11■■□□□ 1.61
SCAMP3-209ENST00000497470 TRIM28Q13263 835 aaKnown RBP25.11■■□□□ 1.61
SCAMP3-209ENST00000497470 GIGYF2Q6Y7W6 1299 aaKnown RBP25.11■■□□□ 1.61
SCAMP3-209ENST00000497470 ZNF652Q9Y2D9 606 aa25.11■■□□□ 1.61
SCAMP3-209ENST00000497470 SLC16A10Q8TF71 515 aa25.1■■□□□ 1.61
SCAMP3-209ENST00000497470 PI4KAP2A4QPH2 592 aa25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 CAMTA2O94983 1202 aa25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 RFC4P35249 363 aa25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 PIP4K2AP48426 406 aaPredicted RBP25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 RRP1P56182 461 aaKnown RBP25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 TTLL7Q6ZT98 887 aa25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 PI4KAP1Q8N8J0 262 aa25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 DNAAF4Q8WXU2 420 aa25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 ANO8Q9HCE9 1232 aaPredicted RBP25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 ATP10DQ9P241 1426 aa25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 USP42Q9H9J4 1324 aaKnown RBP25.09■■□□□ 1.61
SCAMP3-209ENST00000497470 ADCY9O60503 1353 aa25.08■■□□□ 1.61
SCAMP3-209ENST00000497470 ZPR1O75312 459 aa25.08■■□□□ 1.61
SCAMP3-209ENST00000497470 TRIM27P14373 513 aa25.08■■□□□ 1.61
SCAMP3-209ENST00000497470 RIC3Q7Z5B4 369 aa25.08■■□□□ 1.61
SCAMP3-209ENST00000497470 METTL22Q9BUU2 404 aaPredicted RBP25.08■■□□□ 1.61
SCAMP3-209ENST00000497470 ABCC4O15439 1325 aa25.08■■□□□ 1.6
SCAMP3-209ENST00000497470 AIMP1Q12904 312 aaKnown RBP25.07■■□□□ 1.6
SCAMP3-209ENST00000497470 PNPLA7Q6ZV29 1317 aa25.07■■□□□ 1.6
SCAMP3-209ENST00000497470 SOCS7O14512 581 aa25.06■■□□□ 1.6
SCAMP3-209ENST00000497470 INTS3Q68E01 1043 aaKnown RBP25.06■■□□□ 1.6
SCAMP3-209ENST00000497470 BCORQ6W2J9 1755 aa25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 SCN7AQ01118 1682 aa25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 CCT4P50991 539 aaKnown RBP25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 NEXNQ0ZGT2 675 aa25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 TCIRG1Q13488 830 aa25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 AMIGO3Q86WK7 504 aa25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 DZIP1LQ8IYY4 767 aaKnown RBP25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 LINS1Q8NG48 757 aa25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 FRAT1Q92837 279 aaPredicted RBP25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 TBC1D2BQ9UPU7 963 aa25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 MAP3K2Q9Y2U5 619 aa25.05■■□□□ 1.6
SCAMP3-209ENST00000497470 C4AP0C0L4 1744 aa25.04■■□□□ 1.6
SCAMP3-209ENST00000497470 ALDH1L1O75891 902 aa25.04■■□□□ 1.6
SCAMP3-209ENST00000497470 COL23A1Q86Y22 540 aaPredicted RBP25.04■■□□□ 1.6
SCAMP3-209ENST00000497470 ZNF330Q9Y3S2 320 aaPredicted RBP25.04■■□□□ 1.6
SCAMP3-209ENST00000497470 NLGN1Q8N2Q7 840 aa25.03■■□□□ 1.6
SCAMP3-209ENST00000497470 ISCA1Q9BUE6 129 aa25.03■■□□□ 1.6
SCAMP3-209ENST00000497470 TUBGCP6Q96RT7 1819 aa25.02■■□□□ 1.6
SCAMP3-209ENST00000497470 PARP10Q53GL7 1025 aa25.02■■□□□ 1.6
SCAMP3-209ENST00000497470 BEND3Q5T5X7 828 aa25.02■■□□□ 1.6
SCAMP3-209ENST00000497470 ZNF34Q8IZ26 560 aa25.02■■□□□ 1.6
SCAMP3-209ENST00000497470 CHMP4BQ9H444 224 aaKnown RBP25.02■■□□□ 1.6
SCAMP3-209ENST00000497470 SUPT16HQ9Y5B9 1047 aaKnown RBP25.02■■□□□ 1.6
SCAMP3-209ENST00000497470 GYS1P13807 737 aa25.01■■□□□ 1.59
SCAMP3-209ENST00000497470 CCDC191Q8NCU4 936 aa25.01■■□□□ 1.59
SCAMP3-209ENST00000497470 BCL2L12Q9HB09 334 aa25.01■■□□□ 1.59
SCAMP3-209ENST00000497470 N4BP2Q86UW6 1770 aaPredicted RBP25■■□□□ 1.59
SCAMP3-209ENST00000497470 ARFGEF2Q9Y6D5 1785 aa25■■□□□ 1.59
SCAMP3-209ENST00000497470 PHF14O94880 888 aa25■■□□□ 1.59
SCAMP3-209ENST00000497470 FTSJ3Q8IY81 847 aaKnown RBP25■■□□□ 1.59
SCAMP3-209ENST00000497470 ZBTB3Q9H5J0 574 aa25■■□□□ 1.59
SCAMP3-209ENST00000497470 NUP98P52948 1817 aa24.99■■□□□ 1.59
SCAMP3-209ENST00000497470 AAMPQ13685 434 aa24.99■■□□□ 1.59
SCAMP3-209ENST00000497470 HLFQ16534 295 aa24.99■■□□□ 1.59
SCAMP3-209ENST00000497470 USPL1Q5W0Q7 1092 aa24.99■■□□□ 1.59
SCAMP3-209ENST00000497470 SRCIN1Q9C0H9 1055 aa24.99■■□□□ 1.59
SCAMP3-209ENST00000497470 F6X3S4 739 aa24.98■■□□□ 1.59
SCAMP3-209ENST00000497470 ARXQ96QS3 562 aa24.97■■□□□ 1.59
SCAMP3-209ENST00000497470 HDAC5Q9UQL6 1122 aa24.97■■□□□ 1.59
SCAMP3-209ENST00000497470 ANKRD36CQ5JPF3 1778 aa24.96■■□□□ 1.59
SCAMP3-209ENST00000497470 NEURL1BA8MQ27 555 aa24.96■■□□□ 1.59
SCAMP3-209ENST00000497470 IGKV5-2P06315 115 aa24.96■■□□□ 1.59
SCAMP3-209ENST00000497470 TM4SF1P30408 202 aa24.96■■□□□ 1.59
SCAMP3-209ENST00000497470 SRP68Q9UHB9 627 aaKnown RBP24.96■■□□□ 1.59
SCAMP3-209ENST00000497470 UTYO14607 1347 aa24.95■■□□□ 1.58
SCAMP3-209ENST00000497470 MYD88Q99836 296 aa24.95■■□□□ 1.58
SCAMP3-209ENST00000497470 DDX19BQ9UMR2 479 aa24.95■■□□□ 1.58
SCAMP3-209ENST00000497470 PLIN1O60240 522 aa24.94■■□□□ 1.58
SCAMP3-209ENST00000497470 MVPQ14764 893 aaKnown RBP24.94■■□□□ 1.58
SCAMP3-209ENST00000497470 NLRP10Q86W26 655 aa24.94■■□□□ 1.58
SCAMP3-209ENST00000497470 SETDB2Q96T68 719 aa24.94■■□□□ 1.58
SCAMP3-209ENST00000497470 CWC25Q9NXE8 425 aaPredicted RBP24.94■■□□□ 1.58
SCAMP3-209ENST00000497470 HSP90B1P14625 803 aaKnown RBP24.93■■□□□ 1.58
SCAMP3-209ENST00000497470 GCKRQ14397 625 aa24.93■■□□□ 1.58
SCAMP3-209ENST00000497470 SLC4A10Q6U841 1118 aa24.93■■□□□ 1.58
SCAMP3-209ENST00000497470 PPP1R42Q7Z4L9 355 aa24.93■■□□□ 1.58
SCAMP3-209ENST00000497470 CARMIL3Q8ND23 1372 aa24.93■■□□□ 1.58
SCAMP3-209ENST00000497470 RLBP1P12271 317 aa24.92■■□□□ 1.58
SCAMP3-209ENST00000497470 FKBP8Q14318 412 aa24.92■■□□□ 1.58
SCAMP3-209ENST00000497470 TMEM57Q8N5G2 664 aa24.92■■□□□ 1.58
SCAMP3-209ENST00000497470 CLUAP1Q96AJ1 413 aa24.92■■□□□ 1.58
SCAMP3-209ENST00000497470 NYXQ9GZU5 481 aa24.92■■□□□ 1.58
SCAMP3-209ENST00000497470 NIP7Q9Y221 180 aaKnown RBP eCLIP24.92■■□□□ 1.58
SCAMP3-209ENST00000497470 CASZ1Q86V15 1759 aa24.92■■□□□ 1.58
SCAMP3-209ENST00000497470 COL24A1Q17RW2 1714 aa24.92■■□□□ 1.58
SCAMP3-209ENST00000497470 TBC1D9BQ66K14 1250 aa24.91■■□□□ 1.58
SCAMP3-209ENST00000497470 SMIM5Q71RC9 77 aa24.91■■□□□ 1.58
SCAMP3-209ENST00000497470 PCCAP05165 728 aaPredicted RBP24.9■■□□□ 1.58
SCAMP3-209ENST00000497470 GNAI3P08754 354 aa24.9■■□□□ 1.58
SCAMP3-209ENST00000497470 NFIXQ14938 502 aa24.9■■□□□ 1.58
SCAMP3-209ENST00000497470 ZBTB38Q8NAP3 1195 aaPredicted RBP24.9■■□□□ 1.58
SCAMP3-209ENST00000497470 MTFR1LQ9H019 292 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms