RNA–Protein interactions for RNA: ENST00000497073.1

TMC1-206, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-206ENST00000497073 KDRP35968 1356 aa9.95□□□□□ -0.82
TMC1-206ENST00000497073 LRP5O75197 1615 aa9.95□□□□□ -0.82
TMC1-206ENST00000497073 NUP188Q5SRE5 1749 aa9.95□□□□□ -0.82
TMC1-206ENST00000497073 MAP2P11137 1827 aaKnown RBP9.94□□□□□ -0.82
TMC1-206ENST00000497073 LOC102724428A0A0B4J2F2 783 aa9.94□□□□□ -0.82
TMC1-206ENST00000497073 NEFMP07197 916 aa9.94□□□□□ -0.82
TMC1-206ENST00000497073 HMOX1P09601 288 aa9.94□□□□□ -0.82
TMC1-206ENST00000497073 ATP6V1AP38606 617 aa9.94□□□□□ -0.82
TMC1-206ENST00000497073 KCNQ4P56696 695 aa9.94□□□□□ -0.82
TMC1-206ENST00000497073 SIK1P57059 783 aa9.94□□□□□ -0.82
TMC1-206ENST00000497073 ZNF827Q17R98 1081 aa9.94□□□□□ -0.82
TMC1-206ENST00000497073 PRKD2Q9BZL6 878 aa9.94□□□□□ -0.82
TMC1-206ENST00000497073 GAS2L2Q8NHY3 880 aa9.93□□□□□ -0.82
TMC1-206ENST00000497073 ARXQ96QS3 562 aa9.93□□□□□ -0.82
TMC1-206ENST00000497073 PDGFDQ9GZP0 370 aaPredicted RBP9.93□□□□□ -0.82
TMC1-206ENST00000497073 ASAP1Q9ULH1 1129 aa9.93□□□□□ -0.82
TMC1-206ENST00000497073 RGPD2P0DJD1 1756 aa9.93□□□□□ -0.82
TMC1-206ENST00000497073 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
TMC1-206ENST00000497073 BCAMP50895 628 aa9.92□□□□□ -0.82
TMC1-206ENST00000497073 NFATC2IPQ8NCF5 419 aa9.92□□□□□ -0.82
TMC1-206ENST00000497073 ANKK1Q8NFD2 765 aa9.92□□□□□ -0.82
TMC1-206ENST00000497073 PNNQ9H307 717 aaKnown RBP9.92□□□□□ -0.82
TMC1-206ENST00000497073 ATG3Q9NT62 314 aa9.92□□□□□ -0.82
TMC1-206ENST00000497073 BTAF1O14981 1849 aa9.91□□□□□ -0.82
TMC1-206ENST00000497073 PNPLA7Q6ZV29 1317 aa9.91□□□□□ -0.82
TMC1-206ENST00000497073 LCE2AQ5TA79 106 aaPredicted RBP9.91□□□□□ -0.82
TMC1-206ENST00000497073 ZNF454Q8N9F8 522 aa9.91□□□□□ -0.82
TMC1-206ENST00000497073 FCHSD2O94868 740 aa9.9□□□□□ -0.82
TMC1-206ENST00000497073 U2AF1L5P0DN76 240 aaPredicted RBP9.9□□□□□ -0.82
TMC1-206ENST00000497073 PTPREP23469 700 aa9.9□□□□□ -0.82
TMC1-206ENST00000497073 SSFA2P28290 1259 aa9.9□□□□□ -0.82
TMC1-206ENST00000497073 U2AF1Q01081 240 aaKnown RBP eCLIP9.9□□□□□ -0.82
TMC1-206ENST00000497073 MTHFSDQ2M296 383 aaKnown RBP9.9□□□□□ -0.82
TMC1-206ENST00000497073 NYAP1Q6ZVC0 841 aa9.9□□□□□ -0.82
TMC1-206ENST00000497073 COL23A1Q86Y22 540 aaPredicted RBP9.9□□□□□ -0.82
TMC1-206ENST00000497073 SLC52A2Q9HAB3 445 aa9.9□□□□□ -0.82
TMC1-206ENST00000497073 RTCBQ9Y3I0 505 aaKnown RBP9.9□□□□□ -0.82
TMC1-206ENST00000497073 PKD1L3Q7Z443 1732 aa9.9□□□□□ -0.83
TMC1-206ENST00000497073 DOT1LQ8TEK3 1739 aa9.9□□□□□ -0.83
TMC1-206ENST00000497073 GNAT3A8MTJ3 354 aa9.89□□□□□ -0.83
TMC1-206ENST00000497073 RNMTO43148 476 aaKnown RBP9.89□□□□□ -0.83
TMC1-206ENST00000497073 NEFLP07196 543 aa9.89□□□□□ -0.83
TMC1-206ENST00000497073 TEFQ10587 303 aa9.89□□□□□ -0.83
TMC1-206ENST00000497073 RALBP1Q15311 655 aa9.89□□□□□ -0.83
TMC1-206ENST00000497073 TRAPPC3LQ5T215 181 aa9.89□□□□□ -0.83
TMC1-206ENST00000497073 RC3H1Q5TC82 1133 aaKnown RBP9.89□□□□□ -0.83
TMC1-206ENST00000497073 RTF1Q92541 710 aaKnown RBP9.89□□□□□ -0.83
TMC1-206ENST00000497073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.88□□□□□ -0.83
TMC1-206ENST00000497073 GNPATO15228 680 aa9.88□□□□□ -0.83
TMC1-206ENST00000497073 TBC1D12O60347 775 aa9.88□□□□□ -0.83
TMC1-206ENST00000497073 PTCD1O75127 700 aaKnown RBP9.88□□□□□ -0.83
TMC1-206ENST00000497073 PHF14O94880 888 aa9.88□□□□□ -0.83
TMC1-206ENST00000497073 TTC5Q8N0Z6 440 aa9.88□□□□□ -0.83
TMC1-206ENST00000497073 SYT17Q9BSW7 474 aa9.88□□□□□ -0.83
TMC1-206ENST00000497073 FHDC1Q9C0D6 1143 aaPredicted RBP9.88□□□□□ -0.83
TMC1-206ENST00000497073 SHANK3Q9BYB0 1731 aa9.87□□□□□ -0.83
TMC1-206ENST00000497073 PRKAR2BP31323 418 aa9.87□□□□□ -0.83
TMC1-206ENST00000497073 DDX10Q13206 875 aaKnown RBP9.87□□□□□ -0.83
TMC1-206ENST00000497073 LINC00116Q8NCU8 138 aa9.87□□□□□ -0.83
TMC1-206ENST00000497073 LGR6Q9HBX8 967 aa9.87□□□□□ -0.83
TMC1-206ENST00000497073 KAT6BQ8WYB5 2073 aa9.87□□□□□ -0.83
TMC1-206ENST00000497073 PAPPAQ13219 1627 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 SOWAHBA6NEL2 793 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 KDM6AO15550 1401 aaPredicted RBP9.86□□□□□ -0.83
TMC1-206ENST00000497073 RPS6KA4O75676 772 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 RFC4P35249 363 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 ITPK1Q13572 414 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 PLPP6Q8IY26 295 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 NLGN1Q8N2Q7 840 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 RSPH6AQ9H0K4 717 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 WBP1LQ9NX94 342 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 MAP3K5Q99683 1374 aa9.86□□□□□ -0.83
TMC1-206ENST00000497073 CNTNAP4Q9C0A0 1308 aa9.85□□□□□ -0.83
TMC1-206ENST00000497073 HTATSF1O43719 755 aaKnown RBP9.85□□□□□ -0.83
TMC1-206ENST00000497073 TREML4Q6UXN2 200 aa9.85□□□□□ -0.83
TMC1-206ENST00000497073 NPM2Q86SE8 214 aaKnown RBP9.85□□□□□ -0.83
TMC1-206ENST00000497073 TEX13AQ9BXU3 409 aaPredicted RBP9.85□□□□□ -0.83
TMC1-206ENST00000497073 LY75O60449 1722 aa9.85□□□□□ -0.83
TMC1-206ENST00000497073 CASZ1Q86V15 1759 aa9.84□□□□□ -0.83
TMC1-206ENST00000497073 STARD3NLO95772 234 aa9.84□□□□□ -0.83
TMC1-206ENST00000497073 DEKP35659 375 aaKnown RBP9.84□□□□□ -0.83
TMC1-206ENST00000497073 FOXK1P85037 733 aa9.84□□□□□ -0.83
TMC1-206ENST00000497073 GPR162Q16538 588 aa9.84□□□□□ -0.83
TMC1-206ENST00000497073 MSL1Q68DK7 614 aa9.84□□□□□ -0.83
TMC1-206ENST00000497073 PDZRN3Q9UPQ7 1066 aa9.84□□□□□ -0.83
TMC1-206ENST00000497073 CD2APQ9Y5K6 639 aa9.84□□□□□ -0.83
TMC1-206ENST00000497073 V9GY48 417 aaPredicted RBP9.84□□□□□ -0.83
TMC1-206ENST00000497073 MAPK8IP3Q9UPT6 1336 aa9.83□□□□□ -0.84
TMC1-206ENST00000497073 UTRNP46939 3433 aa9.83□□□□□ -0.84
TMC1-206ENST00000497073 BTBD11A6QL63 1104 aa9.83□□□□□ -0.84
TMC1-206ENST00000497073 CRKLP46109 303 aaKnown RBP9.83□□□□□ -0.84
TMC1-206ENST00000497073 IL17REQ8NFR9 667 aa9.83□□□□□ -0.84
TMC1-206ENST00000497073 UBE2Q2Q8WVN8 375 aa9.83□□□□□ -0.84
TMC1-206ENST00000497073 ARHGEF1Q92888 912 aaKnown RBP9.83□□□□□ -0.84
TMC1-206ENST00000497073 PHACTR3Q96KR7 559 aa9.83□□□□□ -0.84
TMC1-206ENST00000497073 COL3A1P02461 1466 aaPredicted RBP9.83□□□□□ -0.84
TMC1-206ENST00000497073 POTECB2RU33 542 aa9.82□□□□□ -0.84
TMC1-206ENST00000497073 ZPR1O75312 459 aa9.82□□□□□ -0.84
TMC1-206ENST00000497073 FOSBP53539 338 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms