RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PLEKHM2Q8IWE5 1019 aa4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 NFATC2IPQ8NCF5 419 aa4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 ZCCHC2Q9C0B9 1178 aaKnown RBP4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 CWC22Q9HCG8 908 aaKnown RBP4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 PRDM10Q9NQV6 1147 aa4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 PPP1R12BO60237 982 aaPredicted RBP4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 MSX1P28360 303 aa4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 BICDL1Q6ZP65 573 aa4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 C1orf229Q6ZS94 237 aaPredicted RBP4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 FAM177A1Q8N128 213 aaPredicted RBP4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 SIX5Q8N196 739 aa4.24□□□□□ -1.73
SNRNP48-202ENST00000496946 BNIP3LO60238 219 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 PTMSP20962 102 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 NOS2P35228 1153 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 SEC13P55735 322 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 TMCO4Q5TGY1 634 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 CERS3Q8IU89 383 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 IRF7Q92985 503 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 NIFKQ9BYG3 293 aaKnown RBP4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 SEPT3Q9UH03 358 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 LRFN2Q9ULH4 789 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 EML1O00423 815 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 C2CD2LO14523 706 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 CTBSQ01459 385 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 MTFR1Q15390 333 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 SLC4A9Q96Q91 983 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 BCS1LQ9Y276 419 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 DYRK1BQ9Y463 629 aa4.23□□□□□ -1.73
SNRNP48-202ENST00000496946 FAM196BA6NMK8 535 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 PCBP4P57723 403 aaKnown RBP4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 ESCO1Q5FWF5 840 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 GNASQ5JWF2 1037 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 LARP1Q6PKG0 1096 aaKnown RBP4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 LARGE2Q8N3Y3 721 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 SECISBP2LQ93073 1101 aaKnown RBP4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 PHACTR1Q9C0D0 580 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 ANO2Q9NQ90 1003 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 E9PSI1 815 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 F11P03951 625 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 ATP1A2P50993 1020 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 MCCD1P59942 119 aaPredicted RBP4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 SETQ01105 290 aaPredicted RBP4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 FOXK2Q01167 660 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 OCLNQ16625 522 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 ALDH16A1Q8IZ83 802 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 SIRT1Q96EB6 747 aa4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 NUCKS1Q9H1E3 243 aaKnown RBP4.22□□□□□ -1.73
SNRNP48-202ENST00000496946 A0A1B0GTH6 734 aa4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 A0A1W2PNR3 127 aa4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 GPC1P35052 558 aa4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 MFAP1P55081 439 aaKnown RBP4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 ATAD2Q6PL18 1390 aa4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 FTSJ3Q8IY81 847 aaKnown RBP4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 ZNF526Q8TF50 670 aaPredicted RBP4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 C7orf43Q8WVR3 580 aa4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 YTHDC1Q96MU7 727 aaKnown RBP4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 ZBTB39O15060 712 aa4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 ATCAYQ86WG3 371 aa4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 C2orf49Q9BVC5 232 aaPredicted RBP4.21□□□□□ -1.74
SNRNP48-202ENST00000496946 SERTM1A2A2V5 107 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 SPATA31C2B4DYI2 1134 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 KHNYNO15037 678 aaKnown RBP4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 GRNP28799 593 aaKnown RBP4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 TRIM50Q86XT4 487 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 FAM200AQ8TCP9 573 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 SLC16A10Q8TF71 515 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 PBXIP1Q96AQ6 731 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 CHMP4BQ9H444 224 aaKnown RBP4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 IGFLR1Q9H665 355 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 QTRT2Q9H974 415 aaKnown RBP4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 ADAMTS2O95450 1211 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 PTMAP06454 111 aaKnown RBP4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 MCCP23508 829 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 SVOPQ8N4V2 548 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 RETREG2Q8NC44 543 aa4.2□□□□□ -1.74
SNRNP48-202ENST00000496946 MAPTP10636 758 aaKnown RBP4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 SFSWAPQ12872 951 aaKnown RBP4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 PHLDB3Q6NSJ2 640 aa4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 PRDM16Q9HAZ2 1276 aa4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 TMEM88BA6NKF7 163 aa4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 CDK2AP1O14519 115 aa4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 NEFMP07197 916 aa4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 DGKZQ13574 1117 aa4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 KRT25Q7Z3Z0 450 aa4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 TRIM22Q8IYM9 498 aa4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 ZIC5Q96T25 663 aa4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 GZF1Q9H116 711 aaPredicted RBP4.19□□□□□ -1.74
SNRNP48-202ENST00000496946 A6NHS1 94 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 BACH1O14867 736 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 VSIG8P0DPA2 414 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 PSMA6P60900 246 aaKnown RBP4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 NBPF1Q3BBV0 1214 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 SV2AQ7L0J3 742 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 ETFBKMTQ8IXQ9 262 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 RBM19Q9Y4C8 960 aaKnown RBP4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 NEURL1BA8MQ27 555 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 CSB-PGBD3P0DP91 1061 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 MX2P20592 715 aa4.18□□□□□ -1.74
SNRNP48-202ENST00000496946 WEE1P30291 646 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms