RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 NUP188Q5SRE5 1749 aa23.22■■□□□ 1.31
RGP1-202ENST00000496906 UBR3Q6ZT12 1888 aa23.22■■□□□ 1.31
RGP1-202ENST00000496906 MS4A1P11836 297 aa23.22■■□□□ 1.31
RGP1-202ENST00000496906 KIF6Q6ZMV9 814 aa23.22■■□□□ 1.31
RGP1-202ENST00000496906 DZIP3Q86Y13 1208 aaKnown RBP23.22■■□□□ 1.31
RGP1-202ENST00000496906 PLBD2Q8NHP8 589 aa23.22■■□□□ 1.31
RGP1-202ENST00000496906 PANK1Q8TE04 598 aa23.22■■□□□ 1.31
RGP1-202ENST00000496906 MAP3K2Q9Y2U5 619 aa23.22■■□□□ 1.31
RGP1-202ENST00000496906 A0A087WZG4 1122 aa23.21■■□□□ 1.31
RGP1-202ENST00000496906 RIC3Q7Z5B4 369 aa23.21■■□□□ 1.31
RGP1-202ENST00000496906 DNAAF4Q8WXU2 420 aa23.21■■□□□ 1.31
RGP1-202ENST00000496906 MAP3K15Q6ZN16 1313 aa23.21■■□□□ 1.31
RGP1-202ENST00000496906 PXDNLA1KZ92 1463 aa23.2■■□□□ 1.31
RGP1-202ENST00000496906 SMIM5Q71RC9 77 aa23.2■■□□□ 1.3
RGP1-202ENST00000496906 TBC1D2BQ9UPU7 963 aa23.2■■□□□ 1.3
RGP1-202ENST00000496906 ADRA2BP18089 450 aa23.19■■□□□ 1.3
RGP1-202ENST00000496906 SSFA2P28290 1259 aa23.19■■□□□ 1.3
RGP1-202ENST00000496906 ZBTB3Q9H5J0 574 aa23.19■■□□□ 1.3
RGP1-202ENST00000496906 ANO8Q9HCE9 1232 aaPredicted RBP23.19■■□□□ 1.3
RGP1-202ENST00000496906 PHF14O94880 888 aa23.18■■□□□ 1.3
RGP1-202ENST00000496906 ARXQ96QS3 562 aa23.18■■□□□ 1.3
RGP1-202ENST00000496906 ARFGEF2Q9Y6D5 1785 aa23.18■■□□□ 1.3
RGP1-202ENST00000496906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.18■■□□□ 1.3
RGP1-202ENST00000496906 ERVV-1B6SEH8 477 aa23.18■■□□□ 1.3
RGP1-202ENST00000496906 SLC4A10Q6U841 1118 aa23.18■■□□□ 1.3
RGP1-202ENST00000496906 TMEM57Q8N5G2 664 aa23.18■■□□□ 1.3
RGP1-202ENST00000496906 ATP10DQ9P241 1426 aa23.17■■□□□ 1.3
RGP1-202ENST00000496906 CAMTA2O94983 1202 aa23.17■■□□□ 1.3
RGP1-202ENST00000496906 IRX6P78412 446 aaPredicted RBP23.17■■□□□ 1.3
RGP1-202ENST00000496906 TRAPPC3LQ5T215 181 aa23.17■■□□□ 1.3
RGP1-202ENST00000496906 ARHGEF1Q92888 912 aaKnown RBP23.17■■□□□ 1.3
RGP1-202ENST00000496906 METTL22Q9BUU2 404 aaPredicted RBP23.17■■□□□ 1.3
RGP1-202ENST00000496906 TFCP2L1Q9NZI6 479 aa23.17■■□□□ 1.3
RGP1-202ENST00000496906 INTS3Q68E01 1043 aaKnown RBP23.16■■□□□ 1.3
RGP1-202ENST00000496906 C4AP0C0L4 1744 aa23.16■■□□□ 1.3
RGP1-202ENST00000496906 SLC15A2Q16348 729 aa23.15■■□□□ 1.3
RGP1-202ENST00000496906 BEND3Q5T5X7 828 aa23.15■■□□□ 1.3
RGP1-202ENST00000496906 GIGYF2Q6Y7W6 1299 aaKnown RBP23.15■■□□□ 1.3
RGP1-202ENST00000496906 NARFQ9UHQ1 456 aa23.15■■□□□ 1.3
RGP1-202ENST00000496906 COG6Q9Y2V7 657 aa23.15■■□□□ 1.3
RGP1-202ENST00000496906 BCORQ6W2J9 1755 aa23.15■■□□□ 1.3
RGP1-202ENST00000496906 TUBGCP6Q96RT7 1819 aa23.15■■□□□ 1.3
RGP1-202ENST00000496906 SCN7AQ01118 1682 aa23.14■■□□□ 1.3
RGP1-202ENST00000496906 CCT4P50991 539 aaKnown RBP23.14■■□□□ 1.3
RGP1-202ENST00000496906 MVPQ14764 893 aaKnown RBP23.14■■□□□ 1.3
RGP1-202ENST00000496906 HLFQ16534 295 aa23.14■■□□□ 1.3
RGP1-202ENST00000496906 STK32BQ9NY57 414 aa23.14■■□□□ 1.3
RGP1-202ENST00000496906 N4BP2Q86UW6 1770 aaPredicted RBP23.14■■□□□ 1.3
RGP1-202ENST00000496906 NEFLP07196 543 aa23.14■■□□□ 1.29
RGP1-202ENST00000496906 ITPRIPQ8IWB1 547 aa23.14■■□□□ 1.29
RGP1-202ENST00000496906 MYD88Q99836 296 aa23.14■■□□□ 1.29
RGP1-202ENST00000496906 USP42Q9H9J4 1324 aaKnown RBP23.14■■□□□ 1.29
RGP1-202ENST00000496906 RGL2O15211 777 aa23.13■■□□□ 1.29
RGP1-202ENST00000496906 RFC4P35249 363 aa23.13■■□□□ 1.29
RGP1-202ENST00000496906 NEXNQ0ZGT2 675 aa23.13■■□□□ 1.29
RGP1-202ENST00000496906 CRBNQ96SW2 442 aa23.13■■□□□ 1.29
RGP1-202ENST00000496906 IGKV5-2P06315 115 aa23.12■■□□□ 1.29
RGP1-202ENST00000496906 PNPLA7Q6ZV29 1317 aa23.12■■□□□ 1.29
RGP1-202ENST00000496906 FLAD1Q8NFF5 587 aa23.12■■□□□ 1.29
RGP1-202ENST00000496906 LINS1Q8NG48 757 aa23.12■■□□□ 1.29
RGP1-202ENST00000496906 SRCIN1Q9C0H9 1055 aa23.12■■□□□ 1.29
RGP1-202ENST00000496906 SRP68Q9UHB9 627 aaKnown RBP23.12■■□□□ 1.29
RGP1-202ENST00000496906 ZPR1O75312 459 aa23.11■■□□□ 1.29
RGP1-202ENST00000496906 TCIRG1Q13488 830 aa23.11■■□□□ 1.29
RGP1-202ENST00000496906 HSP90AB3PQ58FF7 597 aa23.11■■□□□ 1.29
RGP1-202ENST00000496906 USPL1Q5W0Q7 1092 aa23.11■■□□□ 1.29
RGP1-202ENST00000496906 BCL2L12Q9HB09 334 aa23.11■■□□□ 1.29
RGP1-202ENST00000496906 CLEC4GQ6UXB4 293 aa23.1■■□□□ 1.29
RGP1-202ENST00000496906 QSER1Q2KHR3 1735 aa23.1■■□□□ 1.29
RGP1-202ENST00000496906 NEURL1BA8MQ27 555 aa23.1■■□□□ 1.29
RGP1-202ENST00000496906 ALDH1L1O75891 902 aa23.1■■□□□ 1.29
RGP1-202ENST00000496906 CWF19L2Q2TBE0 894 aaKnown RBP23.1■■□□□ 1.29
RGP1-202ENST00000496906 COL23A1Q86Y22 540 aaPredicted RBP23.1■■□□□ 1.29
RGP1-202ENST00000496906 ISCA1Q9BUE6 129 aa23.1■■□□□ 1.29
RGP1-202ENST00000496906 DDX19BQ9UMR2 479 aa23.1■■□□□ 1.29
RGP1-202ENST00000496906 ZNF652Q9Y2D9 606 aa23.1■■□□□ 1.29
RGP1-202ENST00000496906 NUP98P52948 1817 aa23.09■■□□□ 1.29
RGP1-202ENST00000496906 IBTKQ9P2D0 1353 aaPredicted RBP23.09■■□□□ 1.29
RGP1-202ENST00000496906 ATP5J2-PTCD1G3V325 749 aa23.09■■□□□ 1.29
RGP1-202ENST00000496906 ANKRD36CQ5JPF3 1778 aa23.07■■□□□ 1.28
RGP1-202ENST00000496906 TRIM28Q13263 835 aaKnown RBP23.07■■□□□ 1.28
RGP1-202ENST00000496906 ZNF34Q8IZ26 560 aa23.07■■□□□ 1.28
RGP1-202ENST00000496906 EXOC6Q8TAG9 804 aa23.07■■□□□ 1.28
RGP1-202ENST00000496906 ZBTB7BO15156 539 aaPredicted RBP23.06■■□□□ 1.28
RGP1-202ENST00000496906 GYS1P13807 737 aa23.06■■□□□ 1.28
RGP1-202ENST00000496906 GPTP24298 496 aa23.06■■□□□ 1.28
RGP1-202ENST00000496906 FKBP8Q14318 412 aa23.06■■□□□ 1.28
RGP1-202ENST00000496906 CCDC191Q8NCU4 936 aa23.06■■□□□ 1.28
RGP1-202ENST00000496906 UBN2Q6ZU65 1347 aa23.05■■□□□ 1.28
RGP1-202ENST00000496906 GCKRQ14397 625 aa23.05■■□□□ 1.28
RGP1-202ENST00000496906 NLRP10Q86W26 655 aa23.04■■□□□ 1.28
RGP1-202ENST00000496906 MEIS3Q99687 375 aa23.04■■□□□ 1.28
RGP1-202ENST00000496906 USP44Q9H0E7 712 aa23.04■■□□□ 1.28
RGP1-202ENST00000496906 CWC25Q9NXE8 425 aaPredicted RBP23.04■■□□□ 1.28
RGP1-202ENST00000496906 NIP7Q9Y221 180 aaKnown RBP eCLIP23.04■■□□□ 1.28
RGP1-202ENST00000496906 AFDNP55196 1824 aaKnown RBP23.04■■□□□ 1.28
RGP1-202ENST00000496906 MSH5O43196 834 aa23.03■■□□□ 1.28
RGP1-202ENST00000496906 TBC1D9BQ66K14 1250 aa23.03■■□□□ 1.28
RGP1-202ENST00000496906 GRM8O00222 908 aa23.01■■□□□ 1.27
RGP1-202ENST00000496906 PARP10Q53GL7 1025 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms