RNA–Protein interactions for RNA: ENST00000496746.5

YIF1A-210, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 667 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-210ENST00000496746 TEX13AQ9BXU3 409 aaPredicted RBP19.43■□□□□ 0.7
YIF1A-210ENST00000496746 TAF1DQ9H5J8 278 aaPredicted RBP19.43■□□□□ 0.7
YIF1A-210ENST00000496746 VEGFBP49765 207 aa19.42■□□□□ 0.7
YIF1A-210ENST00000496746 CNBD1Q8NA66 436 aa19.42■□□□□ 0.7
YIF1A-210ENST00000496746 MASTLQ96GX5 879 aa19.42■□□□□ 0.7
YIF1A-210ENST00000496746 SETDB2Q96T68 719 aa19.42■□□□□ 0.7
YIF1A-210ENST00000496746 COL3A1P02461 1466 aaPredicted RBP19.41■□□□□ 0.7
YIF1A-210ENST00000496746 LDHDQ86WU2 507 aa19.41■□□□□ 0.7
YIF1A-210ENST00000496746 PRDM10Q9NQV6 1147 aa19.41■□□□□ 0.7
YIF1A-210ENST00000496746 ZNF330Q9Y3S2 320 aaPredicted RBP19.41■□□□□ 0.7
YIF1A-210ENST00000496746 ARFGEF2Q9Y6D5 1785 aa19.41■□□□□ 0.7
YIF1A-210ENST00000496746 KLRG2A4D1S0 409 aaPredicted RBP19.4■□□□□ 0.7
YIF1A-210ENST00000496746 CEMIPQ8WUJ3 1361 aa19.4■□□□□ 0.7
YIF1A-210ENST00000496746 GNAT3A8MTJ3 354 aa19.39■□□□□ 0.69
YIF1A-210ENST00000496746 TEFQ10587 303 aa19.39■□□□□ 0.69
YIF1A-210ENST00000496746 OLFM4Q6UX06 510 aa19.39■□□□□ 0.69
YIF1A-210ENST00000496746 USP16Q9Y5T5 823 aa19.39■□□□□ 0.69
YIF1A-210ENST00000496746 ZNF541Q9H0D2 1346 aa19.39■□□□□ 0.69
YIF1A-210ENST00000496746 ADAMTSL1Q8N6G6 1762 aa19.39■□□□□ 0.69
YIF1A-210ENST00000496746 PRAMEF22A3QJZ6 481 aa19.38■□□□□ 0.69
YIF1A-210ENST00000496746 IQCA1LA6NCM1 817 aa19.38■□□□□ 0.69
YIF1A-210ENST00000496746 PIP4K2AP48426 406 aaPredicted RBP19.38■□□□□ 0.69
YIF1A-210ENST00000496746 CACNA1SQ13698 1873 aa19.38■□□□□ 0.69
YIF1A-210ENST00000496746 BCORQ6W2J9 1755 aa19.38■□□□□ 0.69
YIF1A-210ENST00000496746 FMNL2Q96PY5 1086 aa19.38■□□□□ 0.69
YIF1A-210ENST00000496746 WBP1LQ9NX94 342 aa19.38■□□□□ 0.69
YIF1A-210ENST00000496746 SCN4AP35499 1836 aa19.37■□□□□ 0.69
YIF1A-210ENST00000496746 TMEM88BA6NKF7 163 aa19.37■□□□□ 0.69
YIF1A-210ENST00000496746 ST5P78524 1137 aa19.37■□□□□ 0.69
YIF1A-210ENST00000496746 SOGA3Q5TF21 947 aa19.37■□□□□ 0.69
YIF1A-210ENST00000496746 DZIP3Q86Y13 1208 aaKnown RBP19.37■□□□□ 0.69
YIF1A-210ENST00000496746 PHACTR3Q96KR7 559 aa19.36■□□□□ 0.69
YIF1A-210ENST00000496746 CTCFP49711 727 aaPredicted RBP19.35■□□□□ 0.69
YIF1A-210ENST00000496746 FKBP4Q02790 459 aaKnown RBP eCLIP19.35■□□□□ 0.69
YIF1A-210ENST00000496746 CCDC93Q567U6 631 aa19.35■□□□□ 0.69
YIF1A-210ENST00000496746 GAS2L2Q8NHY3 880 aa19.35■□□□□ 0.69
YIF1A-210ENST00000496746 ZNF277Q9NRM2 450 aaPredicted RBP19.35■□□□□ 0.69
YIF1A-210ENST00000496746 SNED1Q8TER0 1413 aa19.34■□□□□ 0.69
YIF1A-210ENST00000496746 U2SURPO15042 1029 aaKnown RBP19.34■□□□□ 0.69
YIF1A-210ENST00000496746 NPR1P16066 1061 aa19.34■□□□□ 0.69
YIF1A-210ENST00000496746 CLEC4GQ6UXB4 293 aa19.34■□□□□ 0.69
YIF1A-210ENST00000496746 RASSF10A6NK89 507 aa19.33■□□□□ 0.68
YIF1A-210ENST00000496746 FZD9O00144 591 aa19.33■□□□□ 0.68
YIF1A-210ENST00000496746 LBX1P52954 281 aa19.33■□□□□ 0.68
YIF1A-210ENST00000496746 EAPPQ56P03 285 aaPredicted RBP19.33■□□□□ 0.68
YIF1A-210ENST00000496746 NBPF5PQ86XG9 351 aaPredicted RBP19.33■□□□□ 0.68
YIF1A-210ENST00000496746 HACL1Q9UJ83 578 aa19.33■□□□□ 0.68
YIF1A-210ENST00000496746 BTBD11A6QL63 1104 aa19.32■□□□□ 0.68
YIF1A-210ENST00000496746 NBPF26B4DH59 902 aa19.32■□□□□ 0.68
YIF1A-210ENST00000496746 EPHX2P34913 555 aa19.32■□□□□ 0.68
YIF1A-210ENST00000496746 MAP1SQ66K74 1059 aaPredicted RBP19.32■□□□□ 0.68
YIF1A-210ENST00000496746 NBPF10Q6P3W6 841 aaKnown RBP19.32■□□□□ 0.68
YIF1A-210ENST00000496746 NBPF15Q8N660 670 aa19.32■□□□□ 0.68
YIF1A-210ENST00000496746 NPHP1O15259 732 aa19.31■□□□□ 0.68
YIF1A-210ENST00000496746 HSPA8P11142 646 aaKnown RBP19.31■□□□□ 0.68
YIF1A-210ENST00000496746 CNTROBQ8N137 903 aa19.31■□□□□ 0.68
YIF1A-210ENST00000496746 RNF123Q5XPI4 1314 aa19.3■□□□□ 0.68
YIF1A-210ENST00000496746 COL4A5P29400 1685 aa19.3■□□□□ 0.68
YIF1A-210ENST00000496746 IARSP41252 1262 aaKnown RBP19.29■□□□□ 0.68
YIF1A-210ENST00000496746 DEFB115Q30KQ5 88 aa19.29■□□□□ 0.68
YIF1A-210ENST00000496746 SYNE4Q8N205 404 aa19.29■□□□□ 0.68
YIF1A-210ENST00000496746 AIDAQ96BJ3 306 aa19.29■□□□□ 0.68
YIF1A-210ENST00000496746 RSPH6AQ9H0K4 717 aa19.29■□□□□ 0.68
YIF1A-210ENST00000496746 CLEC11AQ9Y240 323 aa19.29■□□□□ 0.68
YIF1A-210ENST00000496746 FMR1Q06787 632 aaKnown RBP eCLIP19.28■□□□□ 0.68
YIF1A-210ENST00000496746 HLFQ16534 295 aa19.28■□□□□ 0.68
YIF1A-210ENST00000496746 TPTE2Q6XPS3 522 aa19.28■□□□□ 0.68
YIF1A-210ENST00000496746 NPM2Q86SE8 214 aaKnown RBP19.28■□□□□ 0.68
YIF1A-210ENST00000496746 RTKN2Q8IZC4 609 aa19.28■□□□□ 0.68
YIF1A-210ENST00000496746 WDR33Q9C0J8 1336 aaKnown RBP19.27■□□□□ 0.68
YIF1A-210ENST00000496746 RGL2O15211 777 aa19.27■□□□□ 0.68
YIF1A-210ENST00000496746 SLC51AQ86UW1 340 aa19.27■□□□□ 0.68
YIF1A-210ENST00000496746 PNMA8AQ86V59 439 aaPredicted RBP19.27■□□□□ 0.68
YIF1A-210ENST00000496746 GPC2Q8N158 579 aa19.27■□□□□ 0.68
YIF1A-210ENST00000496746 ABHD8Q96I13 439 aa19.27■□□□□ 0.68
YIF1A-210ENST00000496746 NIP7Q9Y221 180 aaKnown RBP eCLIP19.27■□□□□ 0.68
YIF1A-210ENST00000496746 LTBP1Q14766 1721 aa19.27■□□□□ 0.68
YIF1A-210ENST00000496746 NPC1L1Q9UHC9 1359 aa19.27■□□□□ 0.68
YIF1A-210ENST00000496746 SNRPA1P09661 255 aaKnown RBP19.26■□□□□ 0.67
YIF1A-210ENST00000496746 PRKAR2BP31323 418 aa19.26■□□□□ 0.67
YIF1A-210ENST00000496746 CFAP53Q96M91 514 aa19.26■□□□□ 0.67
YIF1A-210ENST00000496746 FAM177BA6PVY3 158 aa19.25■□□□□ 0.67
YIF1A-210ENST00000496746 SLC34A2O95436 690 aa19.25■□□□□ 0.67
YIF1A-210ENST00000496746 CRY2Q49AN0 593 aa19.25■□□□□ 0.67
YIF1A-210ENST00000496746 MCM10Q7L590 875 aa19.25■□□□□ 0.67
YIF1A-210ENST00000496746 PSMD1Q99460 953 aa19.25■□□□□ 0.67
YIF1A-210ENST00000496746 DDX21Q9NR30 783 aaKnown RBP eCLIP19.25■□□□□ 0.67
YIF1A-210ENST00000496746 ZNF652Q9Y2D9 606 aa19.25■□□□□ 0.67
YIF1A-210ENST00000496746 ALDH1B1P30837 517 aa19.24■□□□□ 0.67
YIF1A-210ENST00000496746 ABCC12Q96J65 1359 aa19.23■□□□□ 0.67
YIF1A-210ENST00000496746 THSD7BQ9C0I4 1608 aa19.22■□□□□ 0.67
YIF1A-210ENST00000496746 EPS15P42566 896 aa19.22■□□□□ 0.67
YIF1A-210ENST00000496746 SCNN1DP51172 638 aa19.22■□□□□ 0.67
YIF1A-210ENST00000496746 MAP2K1Q02750 393 aaPredicted RBP19.22■□□□□ 0.67
YIF1A-210ENST00000496746 DCTN1Q14203 1278 aa19.22■□□□□ 0.67
YIF1A-210ENST00000496746 CST9Q5W186 159 aa19.22■□□□□ 0.67
YIF1A-210ENST00000496746 HOXA10P31260 410 aaPredicted RBP19.2■□□□□ 0.66
YIF1A-210ENST00000496746 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
YIF1A-210ENST00000496746 NUTM1Q86Y26 1132 aa19.2■□□□□ 0.66
YIF1A-210ENST00000496746 ABT1Q9ULW3 272 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms