RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
SH3D21-204ENST00000496636 LGR6Q9HBX8 967 aa13.17□□□□□ -0.3
SH3D21-204ENST00000496636 EPHX2P34913 555 aa13.16□□□□□ -0.3
SH3D21-204ENST00000496636 BEGAINQ9BUH8 593 aa13.16□□□□□ -0.3
SH3D21-204ENST00000496636 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
SH3D21-204ENST00000496636 UBR2Q8IWV8 1755 aa13.16□□□□□ -0.3
SH3D21-204ENST00000496636 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.3
SH3D21-204ENST00000496636 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.3
SH3D21-204ENST00000496636 THSD7BQ9C0I4 1608 aa13.15□□□□□ -0.3
SH3D21-204ENST00000496636 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.3
SH3D21-204ENST00000496636 PCGF6Q9BYE7 350 aa13.15□□□□□ -0.3
SH3D21-204ENST00000496636 ABT1Q9ULW3 272 aaKnown RBP13.15□□□□□ -0.3
SH3D21-204ENST00000496636 VIRMAQ69YN4 1812 aaKnown RBP13.15□□□□□ -0.3
SH3D21-204ENST00000496636 WDR33Q9C0J8 1336 aaKnown RBP13.14□□□□□ -0.31
SH3D21-204ENST00000496636 ECE1P42892 770 aa13.14□□□□□ -0.31
SH3D21-204ENST00000496636 RGS19P49795 217 aa13.14□□□□□ -0.31
SH3D21-204ENST00000496636 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
SH3D21-204ENST00000496636 PANK3Q9H999 370 aa13.14□□□□□ -0.31
SH3D21-204ENST00000496636 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
SH3D21-204ENST00000496636 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
SH3D21-204ENST00000496636 ZNF541Q9H0D2 1346 aa13.13□□□□□ -0.31
SH3D21-204ENST00000496636 RTKN2Q8IZC4 609 aa13.13□□□□□ -0.31
SH3D21-204ENST00000496636 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
SH3D21-204ENST00000496636 C7orf43Q8WVR3 580 aa13.13□□□□□ -0.31
SH3D21-204ENST00000496636 TIMELESSQ9UNS1 1208 aa13.13□□□□□ -0.31
SH3D21-204ENST00000496636 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
SH3D21-204ENST00000496636 SLX4Q8IY92 1834 aa13.12□□□□□ -0.31
SH3D21-204ENST00000496636 CAMTA2O94983 1202 aa13.12□□□□□ -0.31
SH3D21-204ENST00000496636 NPR1P16066 1061 aa13.12□□□□□ -0.31
SH3D21-204ENST00000496636 GPC2Q8N158 579 aa13.12□□□□□ -0.31
SH3D21-204ENST00000496636 ZNF496Q96IT1 587 aaPredicted RBP13.12□□□□□ -0.31
SH3D21-204ENST00000496636 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
SH3D21-204ENST00000496636 RNF123Q5XPI4 1314 aa13.12□□□□□ -0.31
SH3D21-204ENST00000496636 CCDC85CA6NKD9 419 aa13.11□□□□□ -0.31
SH3D21-204ENST00000496636 RGL2O15211 777 aa13.11□□□□□ -0.31
SH3D21-204ENST00000496636 TEFQ10587 303 aa13.11□□□□□ -0.31
SH3D21-204ENST00000496636 MTHFSDQ2M296 383 aaKnown RBP13.11□□□□□ -0.31
SH3D21-204ENST00000496636 MAP1SQ66K74 1059 aaPredicted RBP13.11□□□□□ -0.31
SH3D21-204ENST00000496636 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
SH3D21-204ENST00000496636 NBPF5PQ86XG9 351 aaPredicted RBP13.11□□□□□ -0.31
SH3D21-204ENST00000496636 DDX21Q9NR30 783 aaKnown RBP eCLIP13.11□□□□□ -0.31
SH3D21-204ENST00000496636 ZNF277Q9NRM2 450 aaPredicted RBP13.11□□□□□ -0.31
SH3D21-204ENST00000496636 FZD9O00144 591 aa13.1□□□□□ -0.31
SH3D21-204ENST00000496636 CA12O43570 354 aa13.1□□□□□ -0.31
SH3D21-204ENST00000496636 HMOX1P09601 288 aa13.1□□□□□ -0.31
SH3D21-204ENST00000496636 CLEC4GQ6UXB4 293 aa13.1□□□□□ -0.31
SH3D21-204ENST00000496636 CAPNS2Q96L46 248 aa13.1□□□□□ -0.31
SH3D21-204ENST00000496636 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
SH3D21-204ENST00000496636 KNSTRNQ9Y448 316 aa13.1□□□□□ -0.31
SH3D21-204ENST00000496636 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
SH3D21-204ENST00000496636 LMOD1P29536 600 aaPredicted RBP13.09□□□□□ -0.31
SH3D21-204ENST00000496636 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
SH3D21-204ENST00000496636 PAXIP1Q6ZW49 1069 aaPredicted RBP13.09□□□□□ -0.31
SH3D21-204ENST00000496636 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
SH3D21-204ENST00000496636 JDP2Q8WYK2 163 aa13.09□□□□□ -0.31
SH3D21-204ENST00000496636 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
SH3D21-204ENST00000496636 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
SH3D21-204ENST00000496636 GPR101Q96P66 508 aaPredicted RBP13.08□□□□□ -0.32
SH3D21-204ENST00000496636 PSMD1Q99460 953 aa13.08□□□□□ -0.32
SH3D21-204ENST00000496636 PDE4DIPQ5VU43 2346 aa13.08□□□□□ -0.32
SH3D21-204ENST00000496636 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
SH3D21-204ENST00000496636 MAP2K2P36507 400 aa13.07□□□□□ -0.32
SH3D21-204ENST00000496636 EIF6P56537 245 aaKnown RBP13.07□□□□□ -0.32
SH3D21-204ENST00000496636 CC2D2BQ6DHV5 1058 aa13.07□□□□□ -0.32
SH3D21-204ENST00000496636 TPTE2Q6XPS3 522 aa13.07□□□□□ -0.32
SH3D21-204ENST00000496636 CACNA1SQ13698 1873 aa13.06□□□□□ -0.32
SH3D21-204ENST00000496636 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
SH3D21-204ENST00000496636 DIAPH1O60610 1272 aaKnown RBP13.06□□□□□ -0.32
SH3D21-204ENST00000496636 A1BGP04217 495 aa13.06□□□□□ -0.32
SH3D21-204ENST00000496636 EIF4G2P78344 907 aaKnown RBP eCLIP13.06□□□□□ -0.32
SH3D21-204ENST00000496636 GRIPAP1Q4V328 841 aa13.06□□□□□ -0.32
SH3D21-204ENST00000496636 USP50Q70EL3 339 aaPredicted RBP13.05□□□□□ -0.32
SH3D21-204ENST00000496636 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
SH3D21-204ENST00000496636 TLL2Q9Y6L7 1015 aa13.05□□□□□ -0.32
SH3D21-204ENST00000496636 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
SH3D21-204ENST00000496636 GRM1Q13255 1194 aa13.04□□□□□ -0.32
SH3D21-204ENST00000496636 CYP4F22Q6NT55 531 aa13.04□□□□□ -0.32
SH3D21-204ENST00000496636 GJA3Q9Y6H8 435 aa13.04□□□□□ -0.32
SH3D21-204ENST00000496636 LTBP1Q14766 1721 aa13.04□□□□□ -0.32
SH3D21-204ENST00000496636 CEMIPQ8WUJ3 1361 aa13.04□□□□□ -0.32
SH3D21-204ENST00000496636 SCNN1DP51172 638 aa13.03□□□□□ -0.32
SH3D21-204ENST00000496636 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
SH3D21-204ENST00000496636 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
SH3D21-204ENST00000496636 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
SH3D21-204ENST00000496636 HHIPL1Q96JK4 782 aa13.03□□□□□ -0.32
SH3D21-204ENST00000496636 CFAP44Q96MT7 982 aa13.03□□□□□ -0.32
SH3D21-204ENST00000496636 MCOLN1Q9GZU1 580 aa13.03□□□□□ -0.32
SH3D21-204ENST00000496636 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
SH3D21-204ENST00000496636 OLFM4Q6UX06 510 aa13.02□□□□□ -0.33
SH3D21-204ENST00000496636 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
SH3D21-204ENST00000496636 BTBD11A6QL63 1104 aa13.01□□□□□ -0.33
SH3D21-204ENST00000496636 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
SH3D21-204ENST00000496636 CRY2Q49AN0 593 aa13.01□□□□□ -0.33
SH3D21-204ENST00000496636 LARGE2Q8N3Y3 721 aa13.01□□□□□ -0.33
SH3D21-204ENST00000496636 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
SH3D21-204ENST00000496636 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
SH3D21-204ENST00000496636 IBTKQ9P2D0 1353 aaPredicted RBP13□□□□□ -0.33
SH3D21-204ENST00000496636 CLSPNQ9HAW4 1339 aa13□□□□□ -0.33
SH3D21-204ENST00000496636 SNRPA1P09661 255 aaKnown RBP13□□□□□ -0.33
SH3D21-204ENST00000496636 HSPA5P11021 654 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms