RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 GOLGB1Q14789 3259 aaKnown RBP9.82□□□□□ -0.84
CDHR3-214ENST00000496633 H0YIN7 160 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 ZNF853P0CG23 659 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 HSP90B1P14625 803 aaKnown RBP9.82□□□□□ -0.84
CDHR3-214ENST00000496633 YY1P25490 414 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 GTF2E1P29083 439 aaPredicted RBP9.82□□□□□ -0.84
CDHR3-214ENST00000496633 PARP10Q53GL7 1025 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 HDGFL1Q5TGJ6 251 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 WWC1Q8IX03 1113 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 CNBD1Q8NA66 436 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 BCL2L12Q9HB09 334 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 UTRNP46939 3433 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 BCORQ6W2J9 1755 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 IBTKQ9P2D0 1353 aaPredicted RBP9.81□□□□□ -0.84
CDHR3-214ENST00000496633 NBPF26B4DH59 902 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 EIF2S2P20042 333 aaKnown RBP9.81□□□□□ -0.84
CDHR3-214ENST00000496633 DDR1Q08345 913 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 DALRD3Q5D0E6 543 aaKnown RBP9.81□□□□□ -0.84
CDHR3-214ENST00000496633 SOGA3Q5TF21 947 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 CCDC30Q5VVM6 783 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 TBC1D9BQ66K14 1250 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 NBPF10Q6P3W6 841 aaKnown RBP9.81□□□□□ -0.84
CDHR3-214ENST00000496633 PPP1R42Q7Z4L9 355 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 NBPF5PQ86XG9 351 aaPredicted RBP9.81□□□□□ -0.84
CDHR3-214ENST00000496633 NBPF15Q8N660 670 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 MYH16Q9H6N6 1097 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 NIP7Q9Y221 180 aaKnown RBP eCLIP9.81□□□□□ -0.84
CDHR3-214ENST00000496633 ATP10DQ9P241 1426 aa9.81□□□□□ -0.84
CDHR3-214ENST00000496633 PXDNLA1KZ92 1463 aa9.8□□□□□ -0.84
CDHR3-214ENST00000496633 PRAMEF22A3QJZ6 481 aa9.8□□□□□ -0.84
CDHR3-214ENST00000496633 DDX58O95786 925 aaKnown RBP9.8□□□□□ -0.84
CDHR3-214ENST00000496633 MYL6BP14649 208 aa9.8□□□□□ -0.84
CDHR3-214ENST00000496633 DUSP27Q5VZP5 1158 aa9.8□□□□□ -0.84
CDHR3-214ENST00000496633 GIGYF2Q6Y7W6 1299 aaKnown RBP9.8□□□□□ -0.84
CDHR3-214ENST00000496633 BICDL1Q6ZP65 573 aa9.8□□□□□ -0.84
CDHR3-214ENST00000496633 FAM9BQ8IZU0 186 aa9.8□□□□□ -0.84
CDHR3-214ENST00000496633 STK31Q9BXU1 1019 aa9.8□□□□□ -0.84
CDHR3-214ENST00000496633 MBIPQ9NS73 344 aa9.8□□□□□ -0.84
CDHR3-214ENST00000496633 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
CDHR3-214ENST00000496633 DPEP1P16444 411 aa9.79□□□□□ -0.84
CDHR3-214ENST00000496633 GOLGA2Q08379 1002 aa9.79□□□□□ -0.84
CDHR3-214ENST00000496633 GRIPAP1Q4V328 841 aa9.79□□□□□ -0.84
CDHR3-214ENST00000496633 CCDC184Q52MB2 194 aa9.79□□□□□ -0.84
CDHR3-214ENST00000496633 TTLL6Q8N841 843 aa9.79□□□□□ -0.84
CDHR3-214ENST00000496633 CNKSR1Q969H4 720 aa9.79□□□□□ -0.84
CDHR3-214ENST00000496633 AFDNP55196 1824 aaKnown RBP9.78□□□□□ -0.84
CDHR3-214ENST00000496633 A0A0G2JLW4 131 aa9.78□□□□□ -0.84
CDHR3-214ENST00000496633 ALDH1B1P30837 517 aa9.78□□□□□ -0.84
CDHR3-214ENST00000496633 STYK1Q6J9G0 422 aa9.78□□□□□ -0.84
CDHR3-214ENST00000496633 PRR5LQ6MZQ0 368 aa9.78□□□□□ -0.84
CDHR3-214ENST00000496633 C2CD5Q86YS7 1000 aa9.78□□□□□ -0.84
CDHR3-214ENST00000496633 PLBD2Q8NHP8 589 aa9.78□□□□□ -0.84
CDHR3-214ENST00000496633 BCS1LQ9Y276 419 aa9.78□□□□□ -0.84
CDHR3-214ENST00000496633 RIC1Q4ADV7 1423 aa9.77□□□□□ -0.85
CDHR3-214ENST00000496633 PIP4K2AP48426 406 aaPredicted RBP9.77□□□□□ -0.85
CDHR3-214ENST00000496633 PDIA6Q15084 440 aa9.77□□□□□ -0.85
CDHR3-214ENST00000496633 ANKRD13DQ6ZTN6 518 aa9.77□□□□□ -0.85
CDHR3-214ENST00000496633 COPS6Q7L5N1 327 aa9.77□□□□□ -0.85
CDHR3-214ENST00000496633 MASTLQ96GX5 879 aa9.77□□□□□ -0.85
CDHR3-214ENST00000496633 TMX4Q9H1E5 349 aaPredicted RBP9.77□□□□□ -0.85
CDHR3-214ENST00000496633 ZC3H4Q9UPT8 1303 aaKnown RBP9.77□□□□□ -0.85
CDHR3-214ENST00000496633 ARFGEF1Q9Y6D6 1849 aa9.77□□□□□ -0.85
CDHR3-214ENST00000496633 NPR1P16066 1061 aa9.76□□□□□ -0.85
CDHR3-214ENST00000496633 YBX3P16989 372 aaKnown RBP eCLIP9.76□□□□□ -0.85
CDHR3-214ENST00000496633 TCIRG1Q13488 830 aa9.76□□□□□ -0.85
CDHR3-214ENST00000496633 TWISTNBQ3B726 338 aaPredicted RBP9.76□□□□□ -0.85
CDHR3-214ENST00000496633 ZNF34Q8IZ26 560 aa9.76□□□□□ -0.85
CDHR3-214ENST00000496633 ZNF428Q96B54 188 aa9.76□□□□□ -0.85
CDHR3-214ENST00000496633 ZBTB3Q9H5J0 574 aa9.76□□□□□ -0.85
CDHR3-214ENST00000496633 CHPF2Q9P2E5 772 aa9.76□□□□□ -0.85
CDHR3-214ENST00000496633 NUP98P52948 1817 aa9.76□□□□□ -0.85
CDHR3-214ENST00000496633 BRCA1P38398 1863 aaKnown RBP9.76□□□□□ -0.85
CDHR3-214ENST00000496633 DLEC1Q9Y238 1755 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 CACNA1FO60840 1977 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 KLRG2A4D1S0 409 aaPredicted RBP9.75□□□□□ -0.85
CDHR3-214ENST00000496633 SRGNP10124 158 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 KCNA3P22001 575 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 NEXNQ0ZGT2 675 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 TRIM28Q13263 835 aaKnown RBP9.75□□□□□ -0.85
CDHR3-214ENST00000496633 HLFQ16534 295 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 DIEXFQ68CQ4 756 aaKnown RBP9.75□□□□□ -0.85
CDHR3-214ENST00000496633 CC2D2BQ6DHV5 1058 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 TTLL7Q6ZT98 887 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 ARHGAP27Q6ZUM4 889 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 LRP10Q7Z4F1 713 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 XAGE3Q8WTP9 111 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 NLRP3Q96P20 1036 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 UTP14AQ9BVJ6 771 aaKnown RBP9.75□□□□□ -0.85
CDHR3-214ENST00000496633 KIAA1551Q9HCM1 1747 aa9.75□□□□□ -0.85
CDHR3-214ENST00000496633 N4BP2Q86UW6 1770 aaPredicted RBP9.75□□□□□ -0.85
CDHR3-214ENST00000496633 E9PSI1 815 aa9.74□□□□□ -0.85
CDHR3-214ENST00000496633 AIMP1Q12904 312 aaKnown RBP9.74□□□□□ -0.85
CDHR3-214ENST00000496633 RIC3Q7Z5B4 369 aa9.74□□□□□ -0.85
CDHR3-214ENST00000496633 ZNF622Q969S3 477 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDHR3-214ENST00000496633 CT47B1P0C2W7 299 aaPredicted RBP9.73□□□□□ -0.85
CDHR3-214ENST00000496633 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
CDHR3-214ENST00000496633 CHRNA5P30532 468 aa9.73□□□□□ -0.85
CDHR3-214ENST00000496633 SLC10A5Q5PT55 438 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms