RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 PTPN5P54829 565 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 HIC1Q14526 733 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 GRIPAP1Q4V328 841 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 USP35Q9P2H5 1018 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 DIP2AQ14689 1571 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 PITPNM2Q9BZ72 1349 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 USP32Q8NFA0 1604 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 ONECUT3O60422 494 aaPredicted RBP7.82□□□□□ -1.16
SSBP1-213ENST00000496622 WDR63Q8IWG1 891 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 CABLES1Q8TDN4 633 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 ZNF526Q8TF50 670 aaPredicted RBP7.82□□□□□ -1.16
SSBP1-213ENST00000496622 RNF166Q96A37 237 aaPredicted RBP7.82□□□□□ -1.16
SSBP1-213ENST00000496622 EYA1Q99502 592 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 PRDM16Q9HAZ2 1276 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 SSH2Q76I76 1423 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 RNF40O75150 1001 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 CALD1Q05682 793 aaKnown RBP7.82□□□□□ -1.16
SSBP1-213ENST00000496622 MEX3CQ5U5Q3 659 aaKnown RBP7.82□□□□□ -1.16
SSBP1-213ENST00000496622 TTC13Q8NBP0 860 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 SLC4A5Q9BY07 1137 aa7.82□□□□□ -1.16
SSBP1-213ENST00000496622 RGPD8O14715 1765 aaPredicted RBP7.81□□□□□ -1.16
SSBP1-213ENST00000496622 NEFMP07197 916 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 FAM193AP78312 1265 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 CCDC27Q2M243 656 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 CERS3Q8IU89 383 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 NGLY1Q96IV0 654 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 OVOS2A0A0J9YW53 1432 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 OVOS2Q6IE36 1432 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 NFE2L2Q16236 605 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 SAMD7Q7Z3H4 446 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 PACS2Q86VP3 889 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 SSH1Q8WYL5 1049 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 PSMD1Q99460 953 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 NBPF3Q9H094 633 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 ADGRG1Q9Y653 693 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 TNS2Q63HR2 1409 aa7.81□□□□□ -1.16
SSBP1-213ENST00000496622 NCOA3Q9Y6Q9 1424 aa7.8□□□□□ -1.16
SSBP1-213ENST00000496622 TMEM94Q12767 1356 aa7.8□□□□□ -1.16
SSBP1-213ENST00000496622 PIK3R4Q99570 1358 aa7.8□□□□□ -1.16
SSBP1-213ENST00000496622 ZC3H6P61129 1189 aaKnown RBP7.8□□□□□ -1.16
SSBP1-213ENST00000496622 RGS22Q8NE09 1264 aa7.8□□□□□ -1.16
SSBP1-213ENST00000496622 LRRC59Q96AG4 307 aaKnown RBP7.8□□□□□ -1.16
SSBP1-213ENST00000496622 MYH16Q9H6N6 1097 aa7.8□□□□□ -1.16
SSBP1-213ENST00000496622 MAP2P11137 1827 aaKnown RBP7.8□□□□□ -1.16
SSBP1-213ENST00000496622 WNT2BQ93097 391 aa7.8□□□□□ -1.16
SSBP1-213ENST00000496622 SMC4Q9NTJ3 1288 aa7.8□□□□□ -1.16
SSBP1-213ENST00000496622 KNDC1Q76NI1 1749 aa7.79□□□□□ -1.16
SSBP1-213ENST00000496622 HOXC9P31274 260 aa7.79□□□□□ -1.16
SSBP1-213ENST00000496622 MTHFSDQ2M296 383 aaKnown RBP7.79□□□□□ -1.16
SSBP1-213ENST00000496622 C19orf44Q9H6X5 657 aa7.79□□□□□ -1.16
SSBP1-213ENST00000496622 CWC22Q9HCG8 908 aaKnown RBP7.79□□□□□ -1.16
SSBP1-213ENST00000496622 MBIPQ9NS73 344 aa7.79□□□□□ -1.16
SSBP1-213ENST00000496622 LRP6O75581 1613 aa7.79□□□□□ -1.16
SSBP1-213ENST00000496622 TTC21AQ8NDW8 1320 aa7.79□□□□□ -1.16
SSBP1-213ENST00000496622 METTL3Q86U44 580 aaKnown RBP7.79□□□□□ -1.16
SSBP1-213ENST00000496622 C8orf58Q8NAV2 365 aa7.79□□□□□ -1.16
SSBP1-213ENST00000496622 IGHDP01880 384 aa7.78□□□□□ -1.16
SSBP1-213ENST00000496622 GCP02774 474 aa7.78□□□□□ -1.16
SSBP1-213ENST00000496622 ATF3P18847 181 aa7.78□□□□□ -1.16
SSBP1-213ENST00000496622 KRT28Q7Z3Y7 464 aa7.78□□□□□ -1.16
SSBP1-213ENST00000496622 NGEFQ8N5V2 710 aa7.78□□□□□ -1.16
SSBP1-213ENST00000496622 XRN1Q8IZH2 1706 aaKnown RBP7.78□□□□□ -1.16
SSBP1-213ENST00000496622 USP31Q70CQ4 1352 aa7.78□□□□□ -1.16
SSBP1-213ENST00000496622 FAM98CQ17RN3 349 aaKnown RBP7.78□□□□□ -1.16
SSBP1-213ENST00000496622 NBPF6Q5VWK0 638 aa7.78□□□□□ -1.16
SSBP1-213ENST00000496622 NBPF4Q96M43 638 aa7.78□□□□□ -1.16
SSBP1-213ENST00000496622 NOB1Q9ULX3 412 aaKnown RBP7.78□□□□□ -1.16
SSBP1-213ENST00000496622 PHLPP1O60346 1717 aa7.78□□□□□ -1.16
SSBP1-213ENST00000496622 ADGRL3Q9HAR2 1447 aa7.77□□□□□ -1.16
SSBP1-213ENST00000496622 ADGRB2O60241 1585 aa7.77□□□□□ -1.17
SSBP1-213ENST00000496622 GOLGA8CPA6NN73 597 aa7.77□□□□□ -1.17
SSBP1-213ENST00000496622 VGLL3A8MV65 326 aa7.77□□□□□ -1.17
SSBP1-213ENST00000496622 TRIM27P14373 513 aa7.77□□□□□ -1.17
SSBP1-213ENST00000496622 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.77□□□□□ -1.17
SSBP1-213ENST00000496622 CHD2O14647 1828 aaKnown RBP7.77□□□□□ -1.17
SSBP1-213ENST00000496622 NBPF26B4DH59 902 aa7.77□□□□□ -1.17
SSBP1-213ENST00000496622 CCDC102AQ96A19 550 aa7.77□□□□□ -1.17
SSBP1-213ENST00000496622 PNNQ9H307 717 aaKnown RBP7.77□□□□□ -1.17
SSBP1-213ENST00000496622 WBP1LQ9NX94 342 aa7.77□□□□□ -1.17
SSBP1-213ENST00000496622 FLT4P35916 1363 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 KIF20BQ96Q89 1820 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 RCCD1A6NED2 376 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 CHRNA2Q15822 529 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 NECTIN2Q92692 538 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 RBM27Q9P2N5 1060 aaKnown RBP7.76□□□□□ -1.17
SSBP1-213ENST00000496622 WWC3Q9ULE0 1092 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 PCDHB15Q9Y5E8 787 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 VAMP4O75379 141 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 ZMYND10O75800 440 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 PTMAP06454 111 aaKnown RBP7.76□□□□□ -1.17
SSBP1-213ENST00000496622 SWT1Q5T5J6 900 aaKnown RBP7.76□□□□□ -1.17
SSBP1-213ENST00000496622 PXYLP1Q8TE99 480 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 ROBO1Q9Y6N7 1651 aa7.76□□□□□ -1.17
SSBP1-213ENST00000496622 MON2Q7Z3U7 1717 aa7.75□□□□□ -1.17
SSBP1-213ENST00000496622 NALCNQ8IZF0 1738 aa7.75□□□□□ -1.17
SSBP1-213ENST00000496622 THSD4Q6ZMP0 1018 aa7.75□□□□□ -1.17
SSBP1-213ENST00000496622 TMEM51Q9NW97 253 aa7.75□□□□□ -1.17
SSBP1-213ENST00000496622 SBNO1A3KN83 1393 aa7.75□□□□□ -1.17
SSBP1-213ENST00000496622 ANKARQ7Z5J8 1434 aa7.75□□□□□ -1.17
SSBP1-213ENST00000496622 PEAK1Q9H792 1746 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms