RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 ZPR1O75312 459 aa23.43■■□□□ 1.34
TSSC4-210ENST00000496468 DDX58O95786 925 aaKnown RBP23.43■■□□□ 1.34
TSSC4-210ENST00000496468 G2E3Q7L622 706 aa23.43■■□□□ 1.34
TSSC4-210ENST00000496468 PSDA5PKW4 1024 aaPredicted RBP23.42■■□□□ 1.34
TSSC4-210ENST00000496468 CAMTA2O94983 1202 aa23.42■■□□□ 1.34
TSSC4-210ENST00000496468 FKBP5Q13451 457 aaPredicted RBP23.42■■□□□ 1.34
TSSC4-210ENST00000496468 ZBTB3Q9H5J0 574 aa23.42■■□□□ 1.34
TSSC4-210ENST00000496468 SRP68Q9UHB9 627 aaKnown RBP23.42■■□□□ 1.34
TSSC4-210ENST00000496468 NARFQ9UHQ1 456 aa23.42■■□□□ 1.34
TSSC4-210ENST00000496468 PTPRCP08575 1304 aa23.41■■□□□ 1.34
TSSC4-210ENST00000496468 BCAR3O75815 825 aa23.41■■□□□ 1.34
TSSC4-210ENST00000496468 BRPF1P55201 1214 aaPredicted RBP23.41■■□□□ 1.34
TSSC4-210ENST00000496468 NUP98P52948 1817 aa23.4■■□□□ 1.34
TSSC4-210ENST00000496468 USPL1Q5W0Q7 1092 aa23.4■■□□□ 1.34
TSSC4-210ENST00000496468 ZNF652Q9Y2D9 606 aa23.4■■□□□ 1.34
TSSC4-210ENST00000496468 PLBD2Q8NHP8 589 aa23.39■■□□□ 1.33
TSSC4-210ENST00000496468 ADCY9O60503 1353 aa23.39■■□□□ 1.33
TSSC4-210ENST00000496468 N4BP2Q86UW6 1770 aaPredicted RBP23.38■■□□□ 1.33
TSSC4-210ENST00000496468 ERVV-1B6SEH8 477 aa23.38■■□□□ 1.33
TSSC4-210ENST00000496468 ANKRD13DQ6ZTN6 518 aa23.38■■□□□ 1.33
TSSC4-210ENST00000496468 RIC3Q7Z5B4 369 aa23.38■■□□□ 1.33
TSSC4-210ENST00000496468 PXDNLA1KZ92 1463 aa23.37■■□□□ 1.33
TSSC4-210ENST00000496468 ATP10DQ9P241 1426 aa23.37■■□□□ 1.33
TSSC4-210ENST00000496468 RGL2O15211 777 aa23.37■■□□□ 1.33
TSSC4-210ENST00000496468 PDGFDQ9GZP0 370 aaPredicted RBP23.37■■□□□ 1.33
TSSC4-210ENST00000496468 COL24A1Q17RW2 1714 aa23.36■■□□□ 1.33
TSSC4-210ENST00000496468 GYS1P13807 737 aa23.36■■□□□ 1.33
TSSC4-210ENST00000496468 KSR2Q6VAB6 950 aa23.36■■□□□ 1.33
TSSC4-210ENST00000496468 FRAT1Q92837 279 aaPredicted RBP23.36■■□□□ 1.33
TSSC4-210ENST00000496468 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
TSSC4-210ENST00000496468 PI4KAP2A4QPH2 592 aa23.35■■□□□ 1.33
TSSC4-210ENST00000496468 PI4KAP1Q8N8J0 262 aa23.35■■□□□ 1.33
TSSC4-210ENST00000496468 SLC16A10Q8TF71 515 aa23.35■■□□□ 1.33
TSSC4-210ENST00000496468 BCL2L12Q9HB09 334 aa23.35■■□□□ 1.33
TSSC4-210ENST00000496468 MAP3K2Q9Y2U5 619 aa23.35■■□□□ 1.33
TSSC4-210ENST00000496468 AFDNP55196 1824 aaKnown RBP23.35■■□□□ 1.33
TSSC4-210ENST00000496468 HLFQ16534 295 aa23.34■■□□□ 1.33
TSSC4-210ENST00000496468 HSP90AB3PQ58FF7 597 aa23.34■■□□□ 1.33
TSSC4-210ENST00000496468 MSL1Q68DK7 614 aa23.34■■□□□ 1.33
TSSC4-210ENST00000496468 CLEC4GQ6UXB4 293 aa23.34■■□□□ 1.33
TSSC4-210ENST00000496468 GIGYF2Q6Y7W6 1299 aaKnown RBP23.34■■□□□ 1.33
TSSC4-210ENST00000496468 IPO8O15397 1037 aaKnown RBP23.33■■□□□ 1.33
TSSC4-210ENST00000496468 FKBP8Q14318 412 aa23.33■■□□□ 1.33
TSSC4-210ENST00000496468 DNAAF4Q8WXU2 420 aa23.33■■□□□ 1.33
TSSC4-210ENST00000496468 API5Q9BZZ5 524 aaKnown RBP23.33■■□□□ 1.33
TSSC4-210ENST00000496468 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
TSSC4-210ENST00000496468 ZKSCAN2Q63HK3 967 aa23.32■■□□□ 1.32
TSSC4-210ENST00000496468 F6X3S4 739 aa23.31■■□□□ 1.32
TSSC4-210ENST00000496468 ZBTB7AO95365 584 aa23.31■■□□□ 1.32
TSSC4-210ENST00000496468 ATF7IPQ6VMQ6 1270 aa23.31■■□□□ 1.32
TSSC4-210ENST00000496468 NLGN1Q8N2Q7 840 aa23.31■■□□□ 1.32
TSSC4-210ENST00000496468 ARHGAP45Q92619 1136 aa23.31■■□□□ 1.32
TSSC4-210ENST00000496468 MYD88Q99836 296 aa23.31■■□□□ 1.32
TSSC4-210ENST00000496468 MTFR1LQ9H019 292 aa23.31■■□□□ 1.32
TSSC4-210ENST00000496468 CARMIL3Q8ND23 1372 aa23.3■■□□□ 1.32
TSSC4-210ENST00000496468 TRIM27P14373 513 aa23.3■■□□□ 1.32
TSSC4-210ENST00000496468 NEXNQ0ZGT2 675 aa23.3■■□□□ 1.32
TSSC4-210ENST00000496468 TBC1D9BQ66K14 1250 aa23.3■■□□□ 1.32
TSSC4-210ENST00000496468 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.3■■□□□ 1.32
TSSC4-210ENST00000496468 METTL22Q9BUU2 404 aaPredicted RBP23.3■■□□□ 1.32
TSSC4-210ENST00000496468 TCIRG1Q13488 830 aa23.29■■□□□ 1.32
TSSC4-210ENST00000496468 SLC4A10Q6U841 1118 aa23.29■■□□□ 1.32
TSSC4-210ENST00000496468 BICDL1Q6ZP65 573 aa23.29■■□□□ 1.32
TSSC4-210ENST00000496468 NIP7Q9Y221 180 aaKnown RBP eCLIP23.29■■□□□ 1.32
TSSC4-210ENST00000496468 ABCC4O15439 1325 aa23.29■■□□□ 1.32
TSSC4-210ENST00000496468 GPTP24298 496 aa23.28■■□□□ 1.32
TSSC4-210ENST00000496468 NFIXQ14938 502 aa23.28■■□□□ 1.32
TSSC4-210ENST00000496468 UBN2Q6ZU65 1347 aa23.28■■□□□ 1.32
TSSC4-210ENST00000496468 FTSJ3Q8IY81 847 aaKnown RBP23.27■■□□□ 1.32
TSSC4-210ENST00000496468 SETDB2Q96T68 719 aa23.27■■□□□ 1.32
TSSC4-210ENST00000496468 ATP5J2-PTCD1G3V325 749 aa23.26■■□□□ 1.31
TSSC4-210ENST00000496468 MMP10P09238 476 aa23.26■■□□□ 1.31
TSSC4-210ENST00000496468 RRP1P56182 461 aaKnown RBP23.26■■□□□ 1.31
TSSC4-210ENST00000496468 ZNF34Q8IZ26 560 aa23.26■■□□□ 1.31
TSSC4-210ENST00000496468 ISCA1Q9BUE6 129 aa23.26■■□□□ 1.31
TSSC4-210ENST00000496468 IBTKQ9P2D0 1353 aaPredicted RBP23.26■■□□□ 1.31
TSSC4-210ENST00000496468 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
TSSC4-210ENST00000496468 PARP10Q53GL7 1025 aa23.25■■□□□ 1.31
TSSC4-210ENST00000496468 LINS1Q8NG48 757 aa23.25■■□□□ 1.31
TSSC4-210ENST00000496468 CLUAP1Q96AJ1 413 aa23.25■■□□□ 1.31
TSSC4-210ENST00000496468 PLIN1O60240 522 aa23.24■■□□□ 1.31
TSSC4-210ENST00000496468 DDR1Q08345 913 aa23.24■■□□□ 1.31
TSSC4-210ENST00000496468 BEND3Q5T5X7 828 aa23.24■■□□□ 1.31
TSSC4-210ENST00000496468 TNNQ9UQP3 1299 aa23.24■■□□□ 1.31
TSSC4-210ENST00000496468 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
TSSC4-210ENST00000496468 NEURL1BA8MQ27 555 aa23.23■■□□□ 1.31
TSSC4-210ENST00000496468 POLRMTO00411 1230 aaKnown RBP23.23■■□□□ 1.31
TSSC4-210ENST00000496468 IGKV5-2P06315 115 aa23.23■■□□□ 1.31
TSSC4-210ENST00000496468 POLD1P28340 1107 aa23.23■■□□□ 1.31
TSSC4-210ENST00000496468 TM4SF1P30408 202 aa23.23■■□□□ 1.31
TSSC4-210ENST00000496468 CWF19L2Q2TBE0 894 aaKnown RBP23.23■■□□□ 1.31
TSSC4-210ENST00000496468 NLRP10Q86W26 655 aa23.23■■□□□ 1.31
TSSC4-210ENST00000496468 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
TSSC4-210ENST00000496468 SRCIN1Q9C0H9 1055 aa23.23■■□□□ 1.31
TSSC4-210ENST00000496468 CWC25Q9NXE8 425 aaPredicted RBP23.23■■□□□ 1.31
TSSC4-210ENST00000496468 PARP3Q9Y6F1 533 aa23.23■■□□□ 1.31
TSSC4-210ENST00000496468 LAMB2P55268 1798 aa23.22■■□□□ 1.31
TSSC4-210ENST00000496468 MS4A1P11836 297 aa23.22■■□□□ 1.31
TSSC4-210ENST00000496468 CCT4P50991 539 aaKnown RBP23.22■■□□□ 1.31
TSSC4-210ENST00000496468 CCDC191Q8NCU4 936 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms