RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
USF1-207ENST00000496363 ZC3H4Q9UPT8 1303 aaKnown RBP17.35■□□□□ 0.37
USF1-207ENST00000496363 PCNTO95613 3336 aa17.34■□□□□ 0.37
USF1-207ENST00000496363 NBPF26B4DH59 902 aa17.34■□□□□ 0.37
USF1-207ENST00000496363 NPHP1O15259 732 aa17.34■□□□□ 0.37
USF1-207ENST00000496363 NBPF10Q6P3W6 841 aaKnown RBP17.34■□□□□ 0.37
USF1-207ENST00000496363 NBPF15Q8N660 670 aa17.34■□□□□ 0.37
USF1-207ENST00000496363 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
USF1-207ENST00000496363 ST5P78524 1137 aa17.33■□□□□ 0.36
USF1-207ENST00000496363 FSTL1Q12841 308 aa17.33■□□□□ 0.36
USF1-207ENST00000496363 PDZRN3Q9UPQ7 1066 aa17.33■□□□□ 0.36
USF1-207ENST00000496363 GLTPD2A6NH11 291 aa17.32■□□□□ 0.36
USF1-207ENST00000496363 TAF7Q15545 349 aaPredicted RBP17.32■□□□□ 0.36
USF1-207ENST00000496363 SRGNP10124 158 aa17.31■□□□□ 0.36
USF1-207ENST00000496363 NBPF5PQ86XG9 351 aaPredicted RBP17.31■□□□□ 0.36
USF1-207ENST00000496363 IFFO2Q5TF58 517 aa17.3■□□□□ 0.36
USF1-207ENST00000496363 STYK1Q6J9G0 422 aa17.3■□□□□ 0.36
USF1-207ENST00000496363 PRPF40BQ6NWY9 871 aaKnown RBP17.3■□□□□ 0.36
USF1-207ENST00000496363 THUMPD2Q9BTF0 503 aaKnown RBP17.3■□□□□ 0.36
USF1-207ENST00000496363 ZNF652Q9Y2D9 606 aa17.3■□□□□ 0.36
USF1-207ENST00000496363 NUP98P52948 1817 aa17.29■□□□□ 0.36
USF1-207ENST00000496363 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
USF1-207ENST00000496363 CLEC4GQ6UXB4 293 aa17.29■□□□□ 0.36
USF1-207ENST00000496363 SMC1BQ8NDV3 1235 aa17.29■□□□□ 0.36
USF1-207ENST00000496363 CNKSR1Q969H4 720 aa17.29■□□□□ 0.36
USF1-207ENST00000496363 MASTLQ96GX5 879 aa17.29■□□□□ 0.36
USF1-207ENST00000496363 PLEKHF1Q96S99 279 aa17.29■□□□□ 0.36
USF1-207ENST00000496363 NIP7Q9Y221 180 aaKnown RBP eCLIP17.29■□□□□ 0.36
USF1-207ENST00000496363 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
USF1-207ENST00000496363 HLFQ16534 295 aa17.28■□□□□ 0.36
USF1-207ENST00000496363 ERFEQ4G0M1 354 aa17.28■□□□□ 0.36
USF1-207ENST00000496363 TAOK3Q9H2K8 898 aa17.28■□□□□ 0.36
USF1-207ENST00000496363 POTECB2RU33 542 aa17.27■□□□□ 0.36
USF1-207ENST00000496363 NFE2L2Q16236 605 aa17.27■□□□□ 0.36
USF1-207ENST00000496363 NGEFQ8N5V2 710 aa17.27■□□□□ 0.36
USF1-207ENST00000496363 LTBP3Q9NS15 1303 aa17.26■□□□□ 0.35
USF1-207ENST00000496363 NEFMP07197 916 aa17.26■□□□□ 0.35
USF1-207ENST00000496363 KLRG1Q96E93 195 aa17.26■□□□□ 0.35
USF1-207ENST00000496363 NPR1P16066 1061 aa17.24■□□□□ 0.35
USF1-207ENST00000496363 EIF4A1P60842 406 aaKnown RBP17.24■□□□□ 0.35
USF1-207ENST00000496363 OLFM4Q6UX06 510 aa17.24■□□□□ 0.35
USF1-207ENST00000496363 TPTE2Q6XPS3 522 aa17.24■□□□□ 0.35
USF1-207ENST00000496363 PNISRQ8TF01 805 aaKnown RBP17.24■□□□□ 0.35
USF1-207ENST00000496363 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
USF1-207ENST00000496363 MAPK8IP3Q9UPT6 1336 aa17.23■□□□□ 0.35
USF1-207ENST00000496363 KLRG2A4D1S0 409 aaPredicted RBP17.23■□□□□ 0.35
USF1-207ENST00000496363 RGL2O15211 777 aa17.23■□□□□ 0.35
USF1-207ENST00000496363 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
USF1-207ENST00000496363 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
USF1-207ENST00000496363 TTLL7Q6ZT98 887 aa17.23■□□□□ 0.35
USF1-207ENST00000496363 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
USF1-207ENST00000496363 ABCC12Q96J65 1359 aa17.23■□□□□ 0.35
USF1-207ENST00000496363 DDNO94850 711 aaPredicted RBP17.22■□□□□ 0.35
USF1-207ENST00000496363 MYL6BP14649 208 aa17.22■□□□□ 0.35
USF1-207ENST00000496363 CCDC93Q567U6 631 aa17.22■□□□□ 0.35
USF1-207ENST00000496363 NUTM1Q86Y26 1132 aa17.21■□□□□ 0.35
USF1-207ENST00000496363 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.34
USF1-207ENST00000496363 POTEIP0CG38 1075 aa17.2■□□□□ 0.34
USF1-207ENST00000496363 POTEJP0CG39 1038 aa17.2■□□□□ 0.34
USF1-207ENST00000496363 GPTP24298 496 aa17.2■□□□□ 0.34
USF1-207ENST00000496363 GTF2E1P29083 439 aaPredicted RBP17.2■□□□□ 0.34
USF1-207ENST00000496363 KIF6Q6ZMV9 814 aa17.2■□□□□ 0.34
USF1-207ENST00000496363 JMYQ8N9B5 988 aa17.2■□□□□ 0.34
USF1-207ENST00000496363 ZBTB3Q9H5J0 574 aa17.2■□□□□ 0.34
USF1-207ENST00000496363 ZNF277Q9NRM2 450 aaPredicted RBP17.2■□□□□ 0.34
USF1-207ENST00000496363 ERVV-1B6SEH8 477 aa17.19■□□□□ 0.34
USF1-207ENST00000496363 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
USF1-207ENST00000496363 SCN4AP35499 1836 aa17.19■□□□□ 0.34
USF1-207ENST00000496363 UBN2Q6ZU65 1347 aa17.19■□□□□ 0.34
USF1-207ENST00000496363 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
USF1-207ENST00000496363 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
USF1-207ENST00000496363 ZNF541Q9H0D2 1346 aa17.18■□□□□ 0.34
USF1-207ENST00000496363 SLC51AQ86UW1 340 aa17.17■□□□□ 0.34
USF1-207ENST00000496363 NYXQ9GZU5 481 aa17.17■□□□□ 0.34
USF1-207ENST00000496363 SNED1Q8TER0 1413 aa17.16■□□□□ 0.34
USF1-207ENST00000496363 RIPK4P57078 832 aa17.16■□□□□ 0.34
USF1-207ENST00000496363 CRY2Q49AN0 593 aa17.16■□□□□ 0.34
USF1-207ENST00000496363 SUSD4Q5VX71 490 aa17.16■□□□□ 0.34
USF1-207ENST00000496363 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
USF1-207ENST00000496363 ANXA1P04083 346 aa17.15■□□□□ 0.34
USF1-207ENST00000496363 EIF2S2P20042 333 aaKnown RBP17.15■□□□□ 0.34
USF1-207ENST00000496363 ALDH1B1P30837 517 aa17.15■□□□□ 0.34
USF1-207ENST00000496363 RALBP1Q15311 655 aa17.15■□□□□ 0.34
USF1-207ENST00000496363 PROSER3Q2NL68 480 aa17.15■□□□□ 0.34
USF1-207ENST00000496363 RTKN2Q8IZC4 609 aa17.15■□□□□ 0.34
USF1-207ENST00000496363 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
USF1-207ENST00000496363 ANKRD36CQ5JPF3 1778 aa17.15■□□□□ 0.34
USF1-207ENST00000496363 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
USF1-207ENST00000496363 COL4A5P29400 1685 aa17.14■□□□□ 0.33
USF1-207ENST00000496363 IARSP41252 1262 aaKnown RBP17.14■□□□□ 0.33
USF1-207ENST00000496363 TMPOP42166 694 aaKnown RBP17.14■□□□□ 0.33
USF1-207ENST00000496363 PDIA6Q15084 440 aa17.14■□□□□ 0.33
USF1-207ENST00000496363 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
USF1-207ENST00000496363 LRP10Q7Z4F1 713 aa17.14■□□□□ 0.33
USF1-207ENST00000496363 CCDC146Q8IYE0 955 aa17.14■□□□□ 0.33
USF1-207ENST00000496363 ZNF34Q8IZ26 560 aa17.14■□□□□ 0.33
USF1-207ENST00000496363 L3MBTL3Q96JM7 780 aaPredicted RBP17.14■□□□□ 0.33
USF1-207ENST00000496363 ERBB4Q15303 1308 aa17.14■□□□□ 0.33
USF1-207ENST00000496363 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
USF1-207ENST00000496363 NTSR2O95665 410 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms