RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SIN3BO75182 1162 aa8.11□□□□□ -1.11
CLK1-214ENST00000496205 ZNF417Q8TAU3 575 aa8.11□□□□□ -1.11
CLK1-214ENST00000496205 ZNF587Q96SQ5 575 aaPredicted RBP8.11□□□□□ -1.11
CLK1-214ENST00000496205 EML1O00423 815 aa8.1□□□□□ -1.11
CLK1-214ENST00000496205 NOS2P35228 1153 aa8.1□□□□□ -1.11
CLK1-214ENST00000496205 WASHC4Q2M389 1173 aa8.1□□□□□ -1.11
CLK1-214ENST00000496205 PRRT3Q5FWE3 981 aa8.1□□□□□ -1.11
CLK1-214ENST00000496205 TBCELQ5QJ74 424 aa8.1□□□□□ -1.11
CLK1-214ENST00000496205 ZNF358Q9NW07 568 aa8.1□□□□□ -1.11
CLK1-214ENST00000496205 SPDYE3A6NKU9 549 aa8.09□□□□□ -1.11
CLK1-214ENST00000496205 DYRK3O43781 588 aa8.09□□□□□ -1.11
CLK1-214ENST00000496205 ALBP02768 609 aa8.09□□□□□ -1.11
CLK1-214ENST00000496205 EPHA4P54764 986 aa8.09□□□□□ -1.11
CLK1-214ENST00000496205 TEAD4Q15561 434 aa8.09□□□□□ -1.11
CLK1-214ENST00000496205 SH3PXD2AQ5TCZ1 1133 aa8.09□□□□□ -1.11
CLK1-214ENST00000496205 MICALL1Q8N3F8 863 aa8.09□□□□□ -1.11
CLK1-214ENST00000496205 BACH1O14867 736 aa8.08□□□□□ -1.12
CLK1-214ENST00000496205 APBA3O96018 575 aa8.08□□□□□ -1.12
CLK1-214ENST00000496205 GTF2IP78347 998 aa8.08□□□□□ -1.12
CLK1-214ENST00000496205 GRIK4Q16099 956 aa8.08□□□□□ -1.12
CLK1-214ENST00000496205 TNFRSF25Q93038 417 aa8.08□□□□□ -1.12
CLK1-214ENST00000496205 PRDM6Q9NQX0 595 aa8.08□□□□□ -1.12
CLK1-214ENST00000496205 SCO2A0A1W2PP80 73 aa8.07□□□□□ -1.12
CLK1-214ENST00000496205 NID1P14543 1247 aa8.07□□□□□ -1.12
CLK1-214ENST00000496205 EML3Q32P44 896 aa8.07□□□□□ -1.12
CLK1-214ENST00000496205 RAB44Q7Z6P3 723 aaPredicted RBP8.07□□□□□ -1.12
CLK1-214ENST00000496205 SLC9A9Q8IVB4 645 aa8.07□□□□□ -1.12
CLK1-214ENST00000496205 TNS4Q8IZW8 715 aa8.07□□□□□ -1.12
CLK1-214ENST00000496205 SKIP12755 728 aa8.06□□□□□ -1.12
CLK1-214ENST00000496205 SOX11P35716 441 aa8.06□□□□□ -1.12
CLK1-214ENST00000496205 TRIM28Q13263 835 aaKnown RBP8.06□□□□□ -1.12
CLK1-214ENST00000496205 C20orf204Q6ZNR8 217 aa8.06□□□□□ -1.12
CLK1-214ENST00000496205 NOD1Q9Y239 953 aa8.06□□□□□ -1.12
CLK1-214ENST00000496205 PSME1Q06323 249 aa8.05□□□□□ -1.12
CLK1-214ENST00000496205 SPEM2Q0P670 501 aa8.05□□□□□ -1.12
CLK1-214ENST00000496205 NCOA4Q13772 614 aa8.05□□□□□ -1.12
CLK1-214ENST00000496205 PRSS36Q5K4E3 855 aa8.05□□□□□ -1.12
CLK1-214ENST00000496205 ZNF232Q9UNY5 417 aa8.05□□□□□ -1.12
CLK1-214ENST00000496205 ADH7P40394 386 aa8.04□□□□□ -1.12
CLK1-214ENST00000496205 ARTNQ5T4W7 220 aa8.04□□□□□ -1.12
CLK1-214ENST00000496205 NEUROD4Q9HD90 331 aa8.04□□□□□ -1.12
CLK1-214ENST00000496205 SERTM1A2A2V5 107 aa8.03□□□□□ -1.12
CLK1-214ENST00000496205 KRTAP1-3Q8IUG1 177 aa8.03□□□□□ -1.12
CLK1-214ENST00000496205 DEPDC4Q8N2C3 294 aa8.03□□□□□ -1.12
CLK1-214ENST00000496205 HSH2DQ96JZ2 352 aa8.03□□□□□ -1.12
CLK1-214ENST00000496205 ALG2Q9H553 416 aa8.03□□□□□ -1.12
CLK1-214ENST00000496205 ZFP64Q9NPA5 681 aa8.03□□□□□ -1.12
CLK1-214ENST00000496205 RHPN1Q8TCX5 695 aa8.02□□□□□ -1.13
CLK1-214ENST00000496205 GPC6Q9Y625 555 aaPredicted RBP8.02□□□□□ -1.13
CLK1-214ENST00000496205 ZBTB7BO15156 539 aaPredicted RBP8.01□□□□□ -1.13
CLK1-214ENST00000496205 LZTS3O60299 673 aaPredicted RBP8.01□□□□□ -1.13
CLK1-214ENST00000496205 SELPP16109 830 aa8.01□□□□□ -1.13
CLK1-214ENST00000496205 ZNF280CQ8ND82 737 aa8.01□□□□□ -1.13
CLK1-214ENST00000496205 CEP63Q96MT8 703 aa8.01□□□□□ -1.13
CLK1-214ENST00000496205 NACC1Q96RE7 527 aa8.01□□□□□ -1.13
CLK1-214ENST00000496205 BRD7Q9NPI1 651 aa8.01□□□□□ -1.13
CLK1-214ENST00000496205 KIAA1024Q9UPX6 916 aa8.01□□□□□ -1.13
CLK1-214ENST00000496205 HCN4Q9Y3Q4 1203 aa8.01□□□□□ -1.13
CLK1-214ENST00000496205 SFI1A8K8P3 1242 aa8□□□□□ -1.13
CLK1-214ENST00000496205 ADGRE1Q14246 886 aa8□□□□□ -1.13
CLK1-214ENST00000496205 MCM6Q14566 821 aa8□□□□□ -1.13
CLK1-214ENST00000496205 TRAPPC3LQ5T215 181 aa8□□□□□ -1.13
CLK1-214ENST00000496205 KCNQ4P56696 695 aa7.99□□□□□ -1.13
CLK1-214ENST00000496205 MBTPS1Q14703 1052 aa7.99□□□□□ -1.13
CLK1-214ENST00000496205 NFATC2IPQ8NCF5 419 aa7.99□□□□□ -1.13
CLK1-214ENST00000496205 KRTAP4-12Q9BQ66 201 aa7.99□□□□□ -1.13
CLK1-214ENST00000496205 TSPAN10Q9H1Z9 355 aaPredicted RBP7.99□□□□□ -1.13
CLK1-214ENST00000496205 COG6Q9Y2V7 657 aa7.99□□□□□ -1.13
CLK1-214ENST00000496205 USP17L5A8MUK1 530 aa7.98□□□□□ -1.13
CLK1-214ENST00000496205 C9orf172C9J069 976 aa7.98□□□□□ -1.13
CLK1-214ENST00000496205 TYRO3Q06418 890 aa7.98□□□□□ -1.13
CLK1-214ENST00000496205 C1orf53Q5VUE5 145 aa7.98□□□□□ -1.13
CLK1-214ENST00000496205 POTEAQ6S8J7 498 aa7.98□□□□□ -1.13
CLK1-214ENST00000496205 SHISA2Q6UWI4 295 aa7.98□□□□□ -1.13
CLK1-214ENST00000496205 PHACTR1Q9C0D0 580 aa7.98□□□□□ -1.13
CLK1-214ENST00000496205 KCNH4Q9UQ05 1017 aa7.98□□□□□ -1.13
CLK1-214ENST00000496205 A0A0A0MRY4 1105 aa7.97□□□□□ -1.13
CLK1-214ENST00000496205 LILRB5O75023 590 aa7.97□□□□□ -1.13
CLK1-214ENST00000496205 H2AFB1P0C5Y9 115 aa7.97□□□□□ -1.13
CLK1-214ENST00000496205 H2AFB2P0C5Z0 115 aa7.97□□□□□ -1.13
CLK1-214ENST00000496205 NEUROD1Q13562 356 aa7.97□□□□□ -1.13
CLK1-214ENST00000496205 TPCN2Q8NHX9 752 aa7.97□□□□□ -1.13
CLK1-214ENST00000496205 BHMTQ93088 406 aa7.97□□□□□ -1.13
CLK1-214ENST00000496205 SUSD3Q96L08 255 aa7.97□□□□□ -1.13
CLK1-214ENST00000496205 HIRAP54198 1017 aaPredicted RBP7.96□□□□□ -1.14
CLK1-214ENST00000496205 PSMA6P60900 246 aaKnown RBP7.96□□□□□ -1.14
CLK1-214ENST00000496205 CLDN10P78369 228 aa7.96□□□□□ -1.14
CLK1-214ENST00000496205 ELNP15502 786 aa7.95□□□□□ -1.14
CLK1-214ENST00000496205 TBC1D8BQ0IIM8 1120 aa7.95□□□□□ -1.14
CLK1-214ENST00000496205 CCDC102BQ68D86 513 aa7.95□□□□□ -1.14
CLK1-214ENST00000496205 ILDR2Q71H61 639 aa7.95□□□□□ -1.14
CLK1-214ENST00000496205 TXNRD3Q86VQ6 643 aa7.95□□□□□ -1.14
CLK1-214ENST00000496205 NUDT8Q8WV74 236 aa7.95□□□□□ -1.14
CLK1-214ENST00000496205 LENG1Q96BZ8 264 aaPredicted RBP7.95□□□□□ -1.14
CLK1-214ENST00000496205 ANKIB1Q9P2G1 1089 aa7.95□□□□□ -1.14
CLK1-214ENST00000496205 IGFLR1Q9H665 355 aa7.94□□□□□ -1.14
CLK1-214ENST00000496205 SLC6A14Q9UN76 642 aa7.94□□□□□ -1.14
CLK1-214ENST00000496205 HYAL3O43820 417 aaPredicted RBP7.93□□□□□ -1.14
CLK1-214ENST00000496205 C21orf2O43822 256 aa7.93□□□□□ -1.14
CLK1-214ENST00000496205 LCE3BQ5TA77 95 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms