RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 HYPKQ9NX55 129 aa12.42□□□□□ -0.42
PRPF3-207ENST00000496202 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
PRPF3-207ENST00000496202 ZNF652Q9Y2D9 606 aa12.42□□□□□ -0.42
PRPF3-207ENST00000496202 BCORQ6W2J9 1755 aa12.42□□□□□ -0.42
PRPF3-207ENST00000496202 GYS1P13807 737 aa12.41□□□□□ -0.42
PRPF3-207ENST00000496202 AIMP1Q12904 312 aaKnown RBP12.41□□□□□ -0.42
PRPF3-207ENST00000496202 PDIA6Q15084 440 aa12.41□□□□□ -0.42
PRPF3-207ENST00000496202 PROSER3Q2NL68 480 aa12.41□□□□□ -0.42
PRPF3-207ENST00000496202 USPL1Q5W0Q7 1092 aa12.41□□□□□ -0.42
PRPF3-207ENST00000496202 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
PRPF3-207ENST00000496202 TCERG1O14776 1098 aaKnown RBP12.4□□□□□ -0.42
PRPF3-207ENST00000496202 VAMP4O75379 141 aa12.4□□□□□ -0.42
PRPF3-207ENST00000496202 TRMT2AQ8IZ69 625 aaKnown RBP12.4□□□□□ -0.42
PRPF3-207ENST00000496202 XAGE3Q8WTP9 111 aa12.4□□□□□ -0.42
PRPF3-207ENST00000496202 MAP3K15Q6ZN16 1313 aa12.39□□□□□ -0.43
PRPF3-207ENST00000496202 CAMTA2O94983 1202 aa12.39□□□□□ -0.43
PRPF3-207ENST00000496202 CT47B1P0C2W7 299 aaPredicted RBP12.39□□□□□ -0.43
PRPF3-207ENST00000496202 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
PRPF3-207ENST00000496202 ZBTB3Q9H5J0 574 aa12.39□□□□□ -0.43
PRPF3-207ENST00000496202 PPP1R1BQ9UD71 204 aaPredicted RBP12.39□□□□□ -0.43
PRPF3-207ENST00000496202 LRP5O75197 1615 aa12.39□□□□□ -0.43
PRPF3-207ENST00000496202 NUP98P52948 1817 aa12.39□□□□□ -0.43
PRPF3-207ENST00000496202 COL24A1Q17RW2 1714 aa12.38□□□□□ -0.43
PRPF3-207ENST00000496202 DDX58O95786 925 aaKnown RBP12.38□□□□□ -0.43
PRPF3-207ENST00000496202 MMP10P09238 476 aa12.38□□□□□ -0.43
PRPF3-207ENST00000496202 COPS6Q7L5N1 327 aa12.38□□□□□ -0.43
PRPF3-207ENST00000496202 ZNF428Q96B54 188 aa12.38□□□□□ -0.43
PRPF3-207ENST00000496202 PARP3Q9Y6F1 533 aa12.38□□□□□ -0.43
PRPF3-207ENST00000496202 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
PRPF3-207ENST00000496202 RGL2O15211 777 aa12.37□□□□□ -0.43
PRPF3-207ENST00000496202 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
PRPF3-207ENST00000496202 CLEC4GQ6UXB4 293 aa12.37□□□□□ -0.43
PRPF3-207ENST00000496202 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
PRPF3-207ENST00000496202 LRP10Q7Z4F1 713 aa12.37□□□□□ -0.43
PRPF3-207ENST00000496202 ARFGEF2Q9Y6D5 1785 aa12.36□□□□□ -0.43
PRPF3-207ENST00000496202 NPHP1O15259 732 aa12.36□□□□□ -0.43
PRPF3-207ENST00000496202 RIC3Q7Z5B4 369 aa12.36□□□□□ -0.43
PRPF3-207ENST00000496202 PLBD2Q8NHP8 589 aa12.36□□□□□ -0.43
PRPF3-207ENST00000496202 SETDB2Q96T68 719 aa12.36□□□□□ -0.43
PRPF3-207ENST00000496202 PHAXQ9H814 394 aaKnown RBP12.36□□□□□ -0.43
PRPF3-207ENST00000496202 BCL2L12Q9HB09 334 aa12.36□□□□□ -0.43
PRPF3-207ENST00000496202 SMC4Q9NTJ3 1288 aa12.36□□□□□ -0.43
PRPF3-207ENST00000496202 ANKRD36CQ5JPF3 1778 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 CARMIL3Q8ND23 1372 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 PTGER2P43116 358 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 FLIIQ13045 1269 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 FKBP5Q13451 457 aaPredicted RBP12.35□□□□□ -0.43
PRPF3-207ENST00000496202 NFIXQ14938 502 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 HLFQ16534 295 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 ALDH1L2Q3SY69 923 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 HSP90AB3PQ58FF7 597 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 TBC1D9BQ66K14 1250 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
PRPF3-207ENST00000496202 ANKRD13DQ6ZTN6 518 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 NIP7Q9Y221 180 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRPF3-207ENST00000496202 ATP10DQ9P241 1426 aa12.35□□□□□ -0.43
PRPF3-207ENST00000496202 GPTP24298 496 aa12.34□□□□□ -0.43
PRPF3-207ENST00000496202 BCL2L13Q9BXK5 485 aa12.34□□□□□ -0.43
PRPF3-207ENST00000496202 AFDNP55196 1824 aaKnown RBP12.33□□□□□ -0.44
PRPF3-207ENST00000496202 TM4SF1P30408 202 aa12.33□□□□□ -0.44
PRPF3-207ENST00000496202 DDR1Q08345 913 aa12.33□□□□□ -0.44
PRPF3-207ENST00000496202 G2E3Q7L622 706 aa12.33□□□□□ -0.44
PRPF3-207ENST00000496202 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
PRPF3-207ENST00000496202 SGIP1Q9BQI5 828 aa12.33□□□□□ -0.44
PRPF3-207ENST00000496202 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
PRPF3-207ENST00000496202 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
PRPF3-207ENST00000496202 SERPINB2P05120 415 aa12.32□□□□□ -0.44
PRPF3-207ENST00000496202 NEXNQ0ZGT2 675 aa12.32□□□□□ -0.44
PRPF3-207ENST00000496202 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
PRPF3-207ENST00000496202 KSR2Q6VAB6 950 aa12.32□□□□□ -0.44
PRPF3-207ENST00000496202 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
PRPF3-207ENST00000496202 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
PRPF3-207ENST00000496202 CNBD1Q8NA66 436 aa12.32□□□□□ -0.44
PRPF3-207ENST00000496202 MAP3K2Q9Y2U5 619 aa12.32□□□□□ -0.44
PRPF3-207ENST00000496202 KIF16BQ96L93 1317 aa12.32□□□□□ -0.44
PRPF3-207ENST00000496202 PI4KAP2A4QPH2 592 aa12.31□□□□□ -0.44
PRPF3-207ENST00000496202 GTF2E1P29083 439 aaPredicted RBP12.31□□□□□ -0.44
PRPF3-207ENST00000496202 RARSP54136 660 aaKnown RBP12.31□□□□□ -0.44
PRPF3-207ENST00000496202 TCIRG1Q13488 830 aa12.31□□□□□ -0.44
PRPF3-207ENST00000496202 PI4KAP1Q8N8J0 262 aa12.31□□□□□ -0.44
PRPF3-207ENST00000496202 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
PRPF3-207ENST00000496202 ADCY9O60503 1353 aa12.3□□□□□ -0.44
PRPF3-207ENST00000496202 ATP5J2-PTCD1G3V325 749 aa12.3□□□□□ -0.44
PRPF3-207ENST00000496202 ST5P78524 1137 aa12.3□□□□□ -0.44
PRPF3-207ENST00000496202 TPTE2Q6XPS3 522 aa12.3□□□□□ -0.44
PRPF3-207ENST00000496202 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
PRPF3-207ENST00000496202 ZNF34Q8IZ26 560 aa12.3□□□□□ -0.44
PRPF3-207ENST00000496202 DNAAF4Q8WXU2 420 aa12.3□□□□□ -0.44
PRPF3-207ENST00000496202 MYD88Q99836 296 aa12.3□□□□□ -0.44
PRPF3-207ENST00000496202 METTL22Q9BUU2 404 aaPredicted RBP12.3□□□□□ -0.44
PRPF3-207ENST00000496202 NRXN2Q9P2S2 1712 aa12.3□□□□□ -0.44
PRPF3-207ENST00000496202 PTPRCP08575 1304 aa12.3□□□□□ -0.44
PRPF3-207ENST00000496202 C10orf71Q711Q0 1435 aa12.29□□□□□ -0.44
PRPF3-207ENST00000496202 UBN2Q6ZU65 1347 aa12.29□□□□□ -0.44
PRPF3-207ENST00000496202 IBTKQ9P2D0 1353 aaPredicted RBP12.29□□□□□ -0.44
PRPF3-207ENST00000496202 F6X3S4 739 aa12.28□□□□□ -0.44
PRPF3-207ENST00000496202 IPO8O15397 1037 aaKnown RBP12.28□□□□□ -0.44
PRPF3-207ENST00000496202 SLC4A10Q6U841 1118 aa12.28□□□□□ -0.44
PRPF3-207ENST00000496202 NLRP10Q86W26 655 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms