RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
RFTN1-211ENST00000495666 NBPF10Q6P3W6 841 aaKnown RBP14.14□□□□□ -0.15
RFTN1-211ENST00000495666 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
RFTN1-211ENST00000495666 RRAGCQ9HB90 399 aa14.14□□□□□ -0.15
RFTN1-211ENST00000495666 NIP7Q9Y221 180 aaKnown RBP eCLIP14.14□□□□□ -0.15
RFTN1-211ENST00000495666 SLX4Q8IY92 1834 aa14.13□□□□□ -0.15
RFTN1-211ENST00000495666 HSPA6P17066 643 aa14.13□□□□□ -0.15
RFTN1-211ENST00000495666 GTF2E1P29083 439 aaPredicted RBP14.13□□□□□ -0.15
RFTN1-211ENST00000495666 PDE6BP35913 854 aa14.13□□□□□ -0.15
RFTN1-211ENST00000495666 PRELPP51888 382 aa14.13□□□□□ -0.15
RFTN1-211ENST00000495666 PLEKHF1Q96S99 279 aa14.13□□□□□ -0.15
RFTN1-211ENST00000495666 ZNF652Q9Y2D9 606 aa14.13□□□□□ -0.15
RFTN1-211ENST00000495666 LAS1LQ9Y4W2 734 aaKnown RBP14.13□□□□□ -0.15
RFTN1-211ENST00000495666 TNRC6CQ9HCJ0 1690 aaKnown RBP14.12□□□□□ -0.15
RFTN1-211ENST00000495666 EIF2S2P20042 333 aaKnown RBP14.12□□□□□ -0.15
RFTN1-211ENST00000495666 GPTP24298 496 aa14.12□□□□□ -0.15
RFTN1-211ENST00000495666 RIPK4P57078 832 aa14.12□□□□□ -0.15
RFTN1-211ENST00000495666 HTRA3P83110 453 aa14.12□□□□□ -0.15
RFTN1-211ENST00000495666 HLFQ16534 295 aa14.12□□□□□ -0.15
RFTN1-211ENST00000495666 ZNF428Q96B54 188 aa14.12□□□□□ -0.15
RFTN1-211ENST00000495666 ZBTB3Q9H5J0 574 aa14.12□□□□□ -0.15
RFTN1-211ENST00000495666 TSPYL4Q9UJ04 414 aa14.12□□□□□ -0.15
RFTN1-211ENST00000495666 KDM2BQ8NHM5 1336 aa14.12□□□□□ -0.15
RFTN1-211ENST00000495666 NUP98P52948 1817 aa14.11□□□□□ -0.15
RFTN1-211ENST00000495666 NFKBIEO00221 500 aa14.11□□□□□ -0.15
RFTN1-211ENST00000495666 HTATSF1O43719 755 aaKnown RBP14.11□□□□□ -0.15
RFTN1-211ENST00000495666 LMNB1P20700 586 aa14.11□□□□□ -0.15
RFTN1-211ENST00000495666 BRIP1Q9BX63 1249 aa14.11□□□□□ -0.15
RFTN1-211ENST00000495666 ANXA1P04083 346 aa14.1□□□□□ -0.15
RFTN1-211ENST00000495666 WDR43Q15061 677 aaKnown RBP eCLIP14.1□□□□□ -0.15
RFTN1-211ENST00000495666 PRPF40BQ6NWY9 871 aaKnown RBP14.1□□□□□ -0.15
RFTN1-211ENST00000495666 KIF6Q6ZMV9 814 aa14.1□□□□□ -0.15
RFTN1-211ENST00000495666 TTLL7Q6ZT98 887 aa14.1□□□□□ -0.15
RFTN1-211ENST00000495666 NUTM1Q86Y26 1132 aa14.1□□□□□ -0.15
RFTN1-211ENST00000495666 FER1L6Q2WGJ9 1857 aa14.1□□□□□ -0.15
RFTN1-211ENST00000495666 TCERG1O14776 1098 aaKnown RBP14.09□□□□□ -0.15
RFTN1-211ENST00000495666 TOMM70O94826 608 aa14.09□□□□□ -0.15
RFTN1-211ENST00000495666 EIF4A1P60842 406 aaKnown RBP14.09□□□□□ -0.15
RFTN1-211ENST00000495666 RALBP1Q15311 655 aa14.09□□□□□ -0.15
RFTN1-211ENST00000495666 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
RFTN1-211ENST00000495666 PNNQ9H307 717 aaKnown RBP14.09□□□□□ -0.15
RFTN1-211ENST00000495666 MYBBP1AQ9BQG0 1328 aaKnown RBP14.09□□□□□ -0.15
RFTN1-211ENST00000495666 ARFGEF2Q9Y6D5 1785 aa14.09□□□□□ -0.15
RFTN1-211ENST00000495666 PNISRQ8TF01 805 aaKnown RBP14.08□□□□□ -0.16
RFTN1-211ENST00000495666 WDR90Q96KV7 1748 aa14.07□□□□□ -0.16
RFTN1-211ENST00000495666 ERFEQ4G0M1 354 aa14.07□□□□□ -0.16
RFTN1-211ENST00000495666 MASTLQ96GX5 879 aa14.07□□□□□ -0.16
RFTN1-211ENST00000495666 ABCC12Q96J65 1359 aa14.07□□□□□ -0.16
RFTN1-211ENST00000495666 DICER1Q9UPY3 1922 aaKnown RBP14.06□□□□□ -0.16
RFTN1-211ENST00000495666 SRGNP10124 158 aa14.06□□□□□ -0.16
RFTN1-211ENST00000495666 TMPOP42166 694 aaKnown RBP14.06□□□□□ -0.16
RFTN1-211ENST00000495666 AIMP1Q12904 312 aaKnown RBP14.06□□□□□ -0.16
RFTN1-211ENST00000495666 KRT24Q2M2I5 525 aa14.06□□□□□ -0.16
RFTN1-211ENST00000495666 TPTE2Q6XPS3 522 aa14.06□□□□□ -0.16
RFTN1-211ENST00000495666 CNKSR1Q969H4 720 aa14.06□□□□□ -0.16
RFTN1-211ENST00000495666 TAOK3Q9H2K8 898 aa14.06□□□□□ -0.16
RFTN1-211ENST00000495666 PROSER3Q2NL68 480 aa14.04□□□□□ -0.16
RFTN1-211ENST00000495666 STYK1Q6J9G0 422 aa14.04□□□□□ -0.16
RFTN1-211ENST00000495666 CLEC4GQ6UXB4 293 aa14.04□□□□□ -0.16
RFTN1-211ENST00000495666 SLC51AQ86UW1 340 aa14.04□□□□□ -0.16
RFTN1-211ENST00000495666 ZNF277Q9NRM2 450 aaPredicted RBP14.04□□□□□ -0.16
RFTN1-211ENST00000495666 MAP3K15Q6ZN16 1313 aa14.04□□□□□ -0.16
RFTN1-211ENST00000495666 GLTPD2A6NH11 291 aa14.03□□□□□ -0.16
RFTN1-211ENST00000495666 NPR1P16066 1061 aa14.03□□□□□ -0.16
RFTN1-211ENST00000495666 APLP1P51693 650 aa14.03□□□□□ -0.16
RFTN1-211ENST00000495666 LMOD3Q0VAK6 560 aa14.03□□□□□ -0.16
RFTN1-211ENST00000495666 RBM46Q8TBY0 533 aaKnown RBP14.03□□□□□ -0.16
RFTN1-211ENST00000495666 UBN2Q6ZU65 1347 aa14.03□□□□□ -0.16
RFTN1-211ENST00000495666 DDNO94850 711 aaPredicted RBP14.02□□□□□ -0.17
RFTN1-211ENST00000495666 CCDC93Q567U6 631 aa14.02□□□□□ -0.17
RFTN1-211ENST00000495666 DPY19L2Q6NUT2 758 aa14.02□□□□□ -0.17
RFTN1-211ENST00000495666 RPGRQ92834 1020 aaKnown RBP14.02□□□□□ -0.17
RFTN1-211ENST00000495666 ADAMTS8Q9UP79 889 aa14.02□□□□□ -0.17
RFTN1-211ENST00000495666 PDZRN3Q9UPQ7 1066 aa14.02□□□□□ -0.17
RFTN1-211ENST00000495666 ANKRD36CQ5JPF3 1778 aa14.01□□□□□ -0.17
RFTN1-211ENST00000495666 SUSD4Q5VX71 490 aa14.01□□□□□ -0.17
RFTN1-211ENST00000495666 RUNDC1Q96C34 613 aa14.01□□□□□ -0.17
RFTN1-211ENST00000495666 NYXQ9GZU5 481 aa14.01□□□□□ -0.17
RFTN1-211ENST00000495666 VEGFAP15692 232 aaPredicted RBP14□□□□□ -0.17
RFTN1-211ENST00000495666 SMC1BQ8NDV3 1235 aa14□□□□□ -0.17
RFTN1-211ENST00000495666 XAGE3Q8WTP9 111 aa14□□□□□ -0.17
RFTN1-211ENST00000495666 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
RFTN1-211ENST00000495666 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
RFTN1-211ENST00000495666 C3orf67Q6ZVT6 689 aa13.99□□□□□ -0.17
RFTN1-211ENST00000495666 CHPF2Q9P2E5 772 aa13.99□□□□□ -0.17
RFTN1-211ENST00000495666 TAF1P21675 1872 aa13.99□□□□□ -0.17
RFTN1-211ENST00000495666 LAMB2P55268 1798 aa13.99□□□□□ -0.17
RFTN1-211ENST00000495666 ZNF541Q9H0D2 1346 aa13.98□□□□□ -0.17
RFTN1-211ENST00000495666 ZC3H4Q9UPT8 1303 aaKnown RBP13.98□□□□□ -0.17
RFTN1-211ENST00000495666 ERVV-1B6SEH8 477 aa13.98□□□□□ -0.17
RFTN1-211ENST00000495666 EAPPQ56P03 285 aaPredicted RBP13.98□□□□□ -0.17
RFTN1-211ENST00000495666 SOGA3Q5TF21 947 aa13.98□□□□□ -0.17
RFTN1-211ENST00000495666 COPS6Q7L5N1 327 aa13.98□□□□□ -0.17
RFTN1-211ENST00000495666 PRKRIP1Q9H875 184 aaPredicted RBP13.98□□□□□ -0.17
RFTN1-211ENST00000495666 TRIM35Q9UPQ4 493 aa13.98□□□□□ -0.17
RFTN1-211ENST00000495666 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
RFTN1-211ENST00000495666 NTSR2O95665 410 aa13.97□□□□□ -0.17
RFTN1-211ENST00000495666 ALDH1B1P30837 517 aa13.97□□□□□ -0.17
RFTN1-211ENST00000495666 FKBP4Q02790 459 aaKnown RBP eCLIP13.97□□□□□ -0.17
RFTN1-211ENST00000495666 FSTL1Q12841 308 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms