RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 DDNO94850 711 aaPredicted RBP23.53■■□□□ 1.36
TMEM53-209ENST00000495630 CCDC88AQ3V6T2 1871 aa23.52■■□□□ 1.36
TMEM53-209ENST00000495630 PRKAR2BP31323 418 aa23.52■■□□□ 1.36
TMEM53-209ENST00000495630 CNGB1Q14028 1251 aaPredicted RBP23.52■■□□□ 1.36
TMEM53-209ENST00000495630 C7orf43Q8WVR3 580 aa23.52■■□□□ 1.36
TMEM53-209ENST00000495630 CREBZFQ9NS37 354 aa23.52■■□□□ 1.36
TMEM53-209ENST00000495630 SNRPA1P09661 255 aaKnown RBP23.51■■□□□ 1.35
TMEM53-209ENST00000495630 NBPF5PQ86XG9 351 aaPredicted RBP23.51■■□□□ 1.35
TMEM53-209ENST00000495630 CFAP53Q96M91 514 aa23.51■■□□□ 1.35
TMEM53-209ENST00000495630 RSPH6AQ9H0K4 717 aa23.51■■□□□ 1.35
TMEM53-209ENST00000495630 ZNF652Q9Y2D9 606 aa23.51■■□□□ 1.35
TMEM53-209ENST00000495630 ANKRD31Q8N7Z5 1873 aa23.51■■□□□ 1.35
TMEM53-209ENST00000495630 RGL2O15211 777 aa23.5■■□□□ 1.35
TMEM53-209ENST00000495630 CAPN15O75808 1086 aa23.5■■□□□ 1.35
TMEM53-209ENST00000495630 NUDCQ9Y266 331 aa23.5■■□□□ 1.35
TMEM53-209ENST00000495630 KLRG2A4D1S0 409 aaPredicted RBP23.49■■□□□ 1.35
TMEM53-209ENST00000495630 IQCA1LA6NCM1 817 aa23.49■■□□□ 1.35
TMEM53-209ENST00000495630 NPR1P16066 1061 aa23.49■■□□□ 1.35
TMEM53-209ENST00000495630 TPTE2Q6XPS3 522 aa23.49■■□□□ 1.35
TMEM53-209ENST00000495630 RTF1Q92541 710 aaKnown RBP23.49■■□□□ 1.35
TMEM53-209ENST00000495630 TIAM2Q8IVF5 1701 aa23.49■■□□□ 1.35
TMEM53-209ENST00000495630 FER1L6Q2WGJ9 1857 aa23.48■■□□□ 1.35
TMEM53-209ENST00000495630 CCDC93Q567U6 631 aa23.48■■□□□ 1.35
TMEM53-209ENST00000495630 SCN7AQ01118 1682 aa23.48■■□□□ 1.35
TMEM53-209ENST00000495630 PIP4K2AP48426 406 aaPredicted RBP23.47■■□□□ 1.35
TMEM53-209ENST00000495630 L3MBTL3Q96JM7 780 aaPredicted RBP23.47■■□□□ 1.35
TMEM53-209ENST00000495630 PRAMEF22A3QJZ6 481 aa23.46■■□□□ 1.35
TMEM53-209ENST00000495630 POTEIP0CG38 1075 aa23.46■■□□□ 1.35
TMEM53-209ENST00000495630 POTEJP0CG39 1038 aa23.46■■□□□ 1.35
TMEM53-209ENST00000495630 DICER1Q9UPY3 1922 aaKnown RBP23.45■■□□□ 1.35
TMEM53-209ENST00000495630 SLX4Q8IY92 1834 aa23.45■■□□□ 1.34
TMEM53-209ENST00000495630 SIPA1L3O60292 1781 aaPredicted RBP23.45■■□□□ 1.34
TMEM53-209ENST00000495630 HTATSF1O43719 755 aaKnown RBP23.45■■□□□ 1.34
TMEM53-209ENST00000495630 LDHDQ86WU2 507 aa23.45■■□□□ 1.34
TMEM53-209ENST00000495630 FKBP4Q02790 459 aaKnown RBP eCLIP23.44■■□□□ 1.34
TMEM53-209ENST00000495630 MCM10Q7L590 875 aa23.44■■□□□ 1.34
TMEM53-209ENST00000495630 RTKN2Q8IZC4 609 aa23.44■■□□□ 1.34
TMEM53-209ENST00000495630 TAF1DQ9H5J8 278 aaPredicted RBP23.44■■□□□ 1.34
TMEM53-209ENST00000495630 MKRN1Q9UHC7 482 aaKnown RBP23.44■■□□□ 1.34
TMEM53-209ENST00000495630 NIP7Q9Y221 180 aaKnown RBP eCLIP23.44■■□□□ 1.34
TMEM53-209ENST00000495630 COL11A2P13942 1736 aaPredicted RBP23.43■■□□□ 1.34
TMEM53-209ENST00000495630 NBPF26B4DH59 902 aa23.43■■□□□ 1.34
TMEM53-209ENST00000495630 U2AF1L5P0DN76 240 aaPredicted RBP23.43■■□□□ 1.34
TMEM53-209ENST00000495630 U2AF1Q01081 240 aaKnown RBP eCLIP23.43■■□□□ 1.34
TMEM53-209ENST00000495630 NBPF10Q6P3W6 841 aaKnown RBP23.43■■□□□ 1.34
TMEM53-209ENST00000495630 NBPF15Q8N660 670 aa23.43■■□□□ 1.34
TMEM53-209ENST00000495630 PASKQ96RG2 1323 aa23.42■■□□□ 1.34
TMEM53-209ENST00000495630 ALDH1B1P30837 517 aa23.42■■□□□ 1.34
TMEM53-209ENST00000495630 TAF7Q15545 349 aaPredicted RBP23.41■■□□□ 1.34
TMEM53-209ENST00000495630 ZNF277Q9NRM2 450 aaPredicted RBP23.41■■□□□ 1.34
TMEM53-209ENST00000495630 ITGBL1O95965 494 aaPredicted RBP23.39■■□□□ 1.33
TMEM53-209ENST00000495630 HACL1Q9UJ83 578 aa23.39■■□□□ 1.33
TMEM53-209ENST00000495630 CNTNAP1P78357 1384 aa23.39■■□□□ 1.33
TMEM53-209ENST00000495630 TMEM88BA6NKF7 163 aa23.38■■□□□ 1.33
TMEM53-209ENST00000495630 GTF2E1P29083 439 aaPredicted RBP23.38■■□□□ 1.33
TMEM53-209ENST00000495630 DCTN1Q14203 1278 aa23.38■■□□□ 1.33
TMEM53-209ENST00000495630 FAM177BA6PVY3 158 aa23.37■■□□□ 1.33
TMEM53-209ENST00000495630 FZD9O00144 591 aa23.37■■□□□ 1.33
TMEM53-209ENST00000495630 PPP2R1AP30153 589 aa23.37■■□□□ 1.33
TMEM53-209ENST00000495630 HLFQ16534 295 aa23.37■■□□□ 1.33
TMEM53-209ENST00000495630 PNMA8AQ86V59 439 aaPredicted RBP23.37■■□□□ 1.33
TMEM53-209ENST00000495630 SYNE4Q8N205 404 aa23.37■■□□□ 1.33
TMEM53-209ENST00000495630 EAPPQ56P03 285 aaPredicted RBP23.36■■□□□ 1.33
TMEM53-209ENST00000495630 OLFM4Q6UX06 510 aa23.36■■□□□ 1.33
TMEM53-209ENST00000495630 CLEC11AQ9Y240 323 aa23.36■■□□□ 1.33
TMEM53-209ENST00000495630 ZNF541Q9H0D2 1346 aa23.35■■□□□ 1.33
TMEM53-209ENST00000495630 BCORQ6W2J9 1755 aa23.35■■□□□ 1.33
TMEM53-209ENST00000495630 EPHX2P34913 555 aa23.35■■□□□ 1.33
TMEM53-209ENST00000495630 IARSP41252 1262 aaKnown RBP23.35■■□□□ 1.33
TMEM53-209ENST00000495630 NYXQ9GZU5 481 aa23.35■■□□□ 1.33
TMEM53-209ENST00000495630 PRDM10Q9NQV6 1147 aa23.35■■□□□ 1.33
TMEM53-209ENST00000495630 ERVV-1B6SEH8 477 aa23.34■■□□□ 1.33
TMEM53-209ENST00000495630 FOXN1O15353 648 aa23.34■■□□□ 1.33
TMEM53-209ENST00000495630 CC2D2BQ6DHV5 1058 aa23.34■■□□□ 1.33
TMEM53-209ENST00000495630 SCN4AP35499 1836 aa23.33■■□□□ 1.33
TMEM53-209ENST00000495630 ARFGEF2Q9Y6D5 1785 aa23.33■■□□□ 1.33
TMEM53-209ENST00000495630 VEGFBP49765 207 aa23.33■■□□□ 1.33
TMEM53-209ENST00000495630 CRY2Q49AN0 593 aa23.33■■□□□ 1.33
TMEM53-209ENST00000495630 GPC2Q8N158 579 aa23.33■■□□□ 1.33
TMEM53-209ENST00000495630 PNISRQ8TF01 805 aaKnown RBP23.33■■□□□ 1.33
TMEM53-209ENST00000495630 PSMD1Q99460 953 aa23.33■■□□□ 1.33
TMEM53-209ENST00000495630 MIS18AQ9NYP9 233 aa23.33■■□□□ 1.33
TMEM53-209ENST00000495630 CNTROBQ8N137 903 aa23.32■■□□□ 1.32
TMEM53-209ENST00000495630 JDP2Q8WYK2 163 aa23.32■■□□□ 1.32
TMEM53-209ENST00000495630 CTCFP49711 727 aaPredicted RBP23.31■■□□□ 1.32
TMEM53-209ENST00000495630 GRIPAP1Q4V328 841 aa23.31■■□□□ 1.32
TMEM53-209ENST00000495630 AIDAQ96BJ3 306 aa23.31■■□□□ 1.32
TMEM53-209ENST00000495630 NGEFQ8N5V2 710 aa23.3■■□□□ 1.32
TMEM53-209ENST00000495630 NEFMP07197 916 aa23.29■■□□□ 1.32
TMEM53-209ENST00000495630 HOXA10P31260 410 aaPredicted RBP23.29■■□□□ 1.32
TMEM53-209ENST00000495630 WBP1LQ9NX94 342 aa23.29■■□□□ 1.32
TMEM53-209ENST00000495630 RNF123Q5XPI4 1314 aa23.29■■□□□ 1.32
TMEM53-209ENST00000495630 MAP3K15Q6ZN16 1313 aa23.29■■□□□ 1.32
TMEM53-209ENST00000495630 CACNA1SQ13698 1873 aa23.28■■□□□ 1.32
TMEM53-209ENST00000495630 DEFB115Q30KQ5 88 aa23.28■■□□□ 1.32
TMEM53-209ENST00000495630 NUTM1Q86Y26 1132 aa23.28■■□□□ 1.32
TMEM53-209ENST00000495630 RASSF10A6NK89 507 aa23.27■■□□□ 1.32
TMEM53-209ENST00000495630 EIF6P56537 245 aaKnown RBP23.27■■□□□ 1.32
TMEM53-209ENST00000495630 MAP1SQ66K74 1059 aaPredicted RBP23.27■■□□□ 1.32
TMEM53-209ENST00000495630 RPGRQ92834 1020 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms