RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 DIAPH3Q9NSV4 1193 aa17.92■□□□□ 0.46
UBXN11-215ENST00000494942 CCDC39Q9UFE4 941 aa17.92■□□□□ 0.46
UBXN11-215ENST00000494942 KCNQ3O43525 872 aa17.91■□□□□ 0.46
UBXN11-215ENST00000494942 TERF1P54274 439 aa17.91■□□□□ 0.46
UBXN11-215ENST00000494942 RPAP1Q9BWH6 1393 aaPredicted RBP17.91■□□□□ 0.46
UBXN11-215ENST00000494942 RRP9O43818 475 aaKnown RBP17.9■□□□□ 0.46
UBXN11-215ENST00000494942 AK2P54819 239 aa17.9■□□□□ 0.46
UBXN11-215ENST00000494942 C1orf141Q5JVX7 400 aa17.9■□□□□ 0.46
UBXN11-215ENST00000494942 ECHDC1Q9NTX5 307 aa17.9■□□□□ 0.46
UBXN11-215ENST00000494942 C9orf78Q9NZ63 289 aaPredicted RBP17.9■□□□□ 0.46
UBXN11-215ENST00000494942 ATP6V1DQ9Y5K8 247 aa17.9■□□□□ 0.46
UBXN11-215ENST00000494942 ZSCAN22P10073 491 aaPredicted RBP17.9■□□□□ 0.46
UBXN11-215ENST00000494942 RASEFQ8IZ41 740 aa17.9■□□□□ 0.46
UBXN11-215ENST00000494942 ZKSCAN5Q9Y2L8 839 aa17.9■□□□□ 0.46
UBXN11-215ENST00000494942 RNMTO43148 476 aaKnown RBP17.89■□□□□ 0.46
UBXN11-215ENST00000494942 KSR2Q6VAB6 950 aa17.89■□□□□ 0.46
UBXN11-215ENST00000494942 KLHL34Q8N239 644 aa17.89■□□□□ 0.46
UBXN11-215ENST00000494942 FAM184AQ8NB25 1140 aa17.89■□□□□ 0.46
UBXN11-215ENST00000494942 LETM1O95202 739 aaPredicted RBP17.89■□□□□ 0.45
UBXN11-215ENST00000494942 MPRIPQ6WCQ1 1025 aa17.89■□□□□ 0.45
UBXN11-215ENST00000494942 RUFY3Q7L099 469 aa17.89■□□□□ 0.45
UBXN11-215ENST00000494942 TM6SF1Q9BZW5 370 aa17.89■□□□□ 0.45
UBXN11-215ENST00000494942 MAP3K2Q9Y2U5 619 aa17.89■□□□□ 0.45
UBXN11-215ENST00000494942 STX6O43752 255 aa17.88■□□□□ 0.45
UBXN11-215ENST00000494942 IFIT2P09913 472 aaKnown RBP17.88■□□□□ 0.45
UBXN11-215ENST00000494942 PRKCSHP14314 528 aaPredicted RBP17.88■□□□□ 0.45
UBXN11-215ENST00000494942 UBE2Q2Q8WVN8 375 aa17.88■□□□□ 0.45
UBXN11-215ENST00000494942 SPG7Q9UQ90 795 aa17.88■□□□□ 0.45
UBXN11-215ENST00000494942 SMC3Q9UQE7 1217 aa17.88■□□□□ 0.45
UBXN11-215ENST00000494942 RGPD2P0DJD1 1756 aa17.88■□□□□ 0.45
UBXN11-215ENST00000494942 HEG1Q9ULI3 1381 aa17.88■□□□□ 0.45
UBXN11-215ENST00000494942 GADD45BO75293 160 aaPredicted RBP17.88■□□□□ 0.45
UBXN11-215ENST00000494942 GIGYF1O75420 1035 aaPredicted RBP17.88■□□□□ 0.45
UBXN11-215ENST00000494942 ANXA1P04083 346 aa17.88■□□□□ 0.45
UBXN11-215ENST00000494942 VPS53Q5VIR6 699 aa17.88■□□□□ 0.45
UBXN11-215ENST00000494942 EVI5LQ96CN4 794 aa17.88■□□□□ 0.45
UBXN11-215ENST00000494942 ZSCAN31Q96LW9 406 aaPredicted RBP17.88■□□□□ 0.45
UBXN11-215ENST00000494942 CASTP20810 708 aaKnown RBP17.87■□□□□ 0.45
UBXN11-215ENST00000494942 ESCO1Q5FWF5 840 aa17.87■□□□□ 0.45
UBXN11-215ENST00000494942 KCNB2Q92953 911 aa17.87■□□□□ 0.45
UBXN11-215ENST00000494942 HYPKQ9NX55 129 aa17.87■□□□□ 0.45
UBXN11-215ENST00000494942 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.87■□□□□ 0.45
UBXN11-215ENST00000494942 SYT1P21579 422 aa17.87■□□□□ 0.45
UBXN11-215ENST00000494942 HSP90AA2PQ14568 343 aaPredicted RBP17.87■□□□□ 0.45
UBXN11-215ENST00000494942 UVSSAQ2YD98 709 aa17.87■□□□□ 0.45
UBXN11-215ENST00000494942 RNF214Q8ND24 703 aa17.87■□□□□ 0.45
UBXN11-215ENST00000494942 LRRC59Q96AG4 307 aaKnown RBP17.87■□□□□ 0.45
UBXN11-215ENST00000494942 GDPD2Q9HCC8 539 aa17.87■□□□□ 0.45
UBXN11-215ENST00000494942 SH2B1Q9NRF2 756 aaPredicted RBP17.87■□□□□ 0.45
UBXN11-215ENST00000494942 ZBTB7CA1YPR0 619 aa17.86■□□□□ 0.45
UBXN11-215ENST00000494942 HIP1O00291 1037 aa17.86■□□□□ 0.45
UBXN11-215ENST00000494942 UBE2HP62256 183 aa17.86■□□□□ 0.45
UBXN11-215ENST00000494942 CSPP1Q1MSJ5 1256 aa17.86■□□□□ 0.45
UBXN11-215ENST00000494942 FOXD4L6Q3SYB3 417 aaPredicted RBP17.86■□□□□ 0.45
UBXN11-215ENST00000494942 CCDC183Q5T5S1 534 aa17.86■□□□□ 0.45
UBXN11-215ENST00000494942 FOXD4L3Q6VB84 417 aaPredicted RBP17.86■□□□□ 0.45
UBXN11-215ENST00000494942 DDX58O95786 925 aaKnown RBP17.85■□□□□ 0.45
UBXN11-215ENST00000494942 F13A1P00488 732 aa17.85■□□□□ 0.45
UBXN11-215ENST00000494942 ARHGEF25Q86VW2 580 aa17.85■□□□□ 0.45
UBXN11-215ENST00000494942 LINS1Q8NG48 757 aa17.85■□□□□ 0.45
UBXN11-215ENST00000494942 ZSWIM6Q9HCJ5 1215 aa17.85■□□□□ 0.45
UBXN11-215ENST00000494942 PDRG1Q9NUG6 133 aa17.85■□□□□ 0.45
UBXN11-215ENST00000494942 CYP46A1Q9Y6A2 500 aa17.85■□□□□ 0.45
UBXN11-215ENST00000494942 UTYO14607 1347 aa17.85■□□□□ 0.45
UBXN11-215ENST00000494942 PDIA4P13667 645 aaKnown RBP17.84■□□□□ 0.45
UBXN11-215ENST00000494942 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
UBXN11-215ENST00000494942 GCP02774 474 aa17.84■□□□□ 0.45
UBXN11-215ENST00000494942 ZKSCAN1P17029 563 aaPredicted RBP17.84■□□□□ 0.45
UBXN11-215ENST00000494942 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
UBXN11-215ENST00000494942 TCHHQ07283 1943 aa17.84■□□□□ 0.45
UBXN11-215ENST00000494942 SLIT3O75094 1523 aa17.84■□□□□ 0.45
UBXN11-215ENST00000494942 PTH1RQ03431 593 aa17.83■□□□□ 0.45
UBXN11-215ENST00000494942 JAKMIP1Q96N16 626 aaKnown RBP17.83■□□□□ 0.45
UBXN11-215ENST00000494942 PXDNQ92626 1479 aa17.83■□□□□ 0.45
UBXN11-215ENST00000494942 GRM8O00222 908 aa17.83■□□□□ 0.44
UBXN11-215ENST00000494942 NECTIN1Q15223 517 aa17.83■□□□□ 0.44
UBXN11-215ENST00000494942 PRPF40BQ6NWY9 871 aaKnown RBP17.83■□□□□ 0.44
UBXN11-215ENST00000494942 AACSQ86V21 672 aa17.83■□□□□ 0.44
UBXN11-215ENST00000494942 CCDC171Q6TFL3 1326 aa17.83■□□□□ 0.44
UBXN11-215ENST00000494942 PROSER3Q2NL68 480 aa17.82■□□□□ 0.44
UBXN11-215ENST00000494942 LTBP4Q8N2S1 1624 aa17.82■□□□□ 0.44
UBXN11-215ENST00000494942 G3BP1Q13283 466 aaKnown RBP eCLIP17.82■□□□□ 0.44
UBXN11-215ENST00000494942 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
UBXN11-215ENST00000494942 DDX21Q9NR30 783 aaKnown RBP eCLIP17.82■□□□□ 0.44
UBXN11-215ENST00000494942 PA2G4Q9UQ80 394 aaKnown RBP17.82■□□□□ 0.44
UBXN11-215ENST00000494942 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
UBXN11-215ENST00000494942 SIPA1L3O60292 1781 aaPredicted RBP17.81■□□□□ 0.44
UBXN11-215ENST00000494942 ANKRD24Q8TF21 1146 aa17.81■□□□□ 0.44
UBXN11-215ENST00000494942 SNRKQ9NRH2 765 aa17.81■□□□□ 0.44
UBXN11-215ENST00000494942 PTMAP06454 111 aaKnown RBP17.81■□□□□ 0.44
UBXN11-215ENST00000494942 GJB2P29033 226 aa17.81■□□□□ 0.44
UBXN11-215ENST00000494942 XIRP1Q702N8 1843 aaKnown RBP17.8■□□□□ 0.44
UBXN11-215ENST00000494942 CPA1P15085 419 aa17.8■□□□□ 0.44
UBXN11-215ENST00000494942 ADCK5Q3MIX3 580 aa17.8■□□□□ 0.44
UBXN11-215ENST00000494942 GLIPR1L2Q4G1C9 344 aa17.8■□□□□ 0.44
UBXN11-215ENST00000494942 PROSER2Q86WR7 435 aaPredicted RBP17.8■□□□□ 0.44
UBXN11-215ENST00000494942 CCDC83Q8IWF9 413 aa17.8■□□□□ 0.44
UBXN11-215ENST00000494942 MAP4K1Q92918 833 aa17.8■□□□□ 0.44
UBXN11-215ENST00000494942 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
UBXN11-215ENST00000494942 LARGE1O95461 756 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms