RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 COL3A1P02461 1466 aaPredicted RBP21.37■■□□□ 1.01
COL4A2-209ENST00000494852 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
COL4A2-209ENST00000494852 SLX4Q8IY92 1834 aa21.35■■□□□ 1.01
COL4A2-209ENST00000494852 NPHP1O15259 732 aa21.35■■□□□ 1.01
COL4A2-209ENST00000494852 IQCA1LA6NCM1 817 aa21.34■■□□□ 1.01
COL4A2-209ENST00000494852 U2SURPO15042 1029 aaKnown RBP21.34■■□□□ 1.01
COL4A2-209ENST00000494852 POTEIP0CG38 1075 aa21.34■■□□□ 1.01
COL4A2-209ENST00000494852 POTEJP0CG39 1038 aa21.34■■□□□ 1.01
COL4A2-209ENST00000494852 DZIP3Q86Y13 1208 aaKnown RBP21.34■■□□□ 1.01
COL4A2-209ENST00000494852 ARFGEF2Q9Y6D5 1785 aa21.33■■□□□ 1.01
COL4A2-209ENST00000494852 CLEC4GQ6UXB4 293 aa21.33■■□□□ 1.01
COL4A2-209ENST00000494852 C7orf43Q8WVR3 580 aa21.33■■□□□ 1.01
COL4A2-209ENST00000494852 L3MBTL3Q96JM7 780 aaPredicted RBP21.33■■□□□ 1.01
COL4A2-209ENST00000494852 MKRN1Q9UHC7 482 aaKnown RBP21.33■■□□□ 1.01
COL4A2-209ENST00000494852 NPC1L1Q9UHC9 1359 aa21.33■■□□□ 1
COL4A2-209ENST00000494852 BTBD11A6QL63 1104 aa21.32■■□□□ 1
COL4A2-209ENST00000494852 LDHDQ86WU2 507 aa21.32■■□□□ 1
COL4A2-209ENST00000494852 BCORQ6W2J9 1755 aa21.32■■□□□ 1
COL4A2-209ENST00000494852 PASKQ96RG2 1323 aa21.31■■□□□ 1
COL4A2-209ENST00000494852 KLRG2A4D1S0 409 aaPredicted RBP21.3■■□□□ 1
COL4A2-209ENST00000494852 KCNQ3O43525 872 aa21.3■■□□□ 1
COL4A2-209ENST00000494852 CCDC93Q567U6 631 aa21.3■■□□□ 1
COL4A2-209ENST00000494852 NBPF5PQ86XG9 351 aaPredicted RBP21.3■■□□□ 1
COL4A2-209ENST00000494852 TAF1DQ9H5J8 278 aaPredicted RBP21.3■■□□□ 1
COL4A2-209ENST00000494852 USP16Q9Y5T5 823 aa21.3■■□□□ 1
COL4A2-209ENST00000494852 CNTNAP1P78357 1384 aa21.3■■□□□ 1
COL4A2-209ENST00000494852 SCN4AP35499 1836 aa21.29■■□□□ 1
COL4A2-209ENST00000494852 CACNA1SQ13698 1873 aa21.29■■□□□ 1
COL4A2-209ENST00000494852 RGL2O15211 777 aa21.29■■□□□ 1
COL4A2-209ENST00000494852 NPR1P16066 1061 aa21.29■■□□□ 1
COL4A2-209ENST00000494852 ZNF652Q9Y2D9 606 aa21.29■■□□□ 1
COL4A2-209ENST00000494852 PHACTR3Q96KR7 559 aa21.28■■□□□ 1
COL4A2-209ENST00000494852 FKBP4Q02790 459 aaKnown RBP eCLIP21.27■■□□□ 1
COL4A2-209ENST00000494852 ITGBL1O95965 494 aaPredicted RBP21.26■□□□□ 0.99
COL4A2-209ENST00000494852 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
COL4A2-209ENST00000494852 TPTE2Q6XPS3 522 aa21.26■□□□□ 0.99
COL4A2-209ENST00000494852 PRDM10Q9NQV6 1147 aa21.26■□□□□ 0.99
COL4A2-209ENST00000494852 TMEM88BA6NKF7 163 aa21.25■□□□□ 0.99
COL4A2-209ENST00000494852 FOXN1O15353 648 aa21.25■□□□□ 0.99
COL4A2-209ENST00000494852 PRKAR2BP31323 418 aa21.25■□□□□ 0.99
COL4A2-209ENST00000494852 PIP4K2AP48426 406 aaPredicted RBP21.25■□□□□ 0.99
COL4A2-209ENST00000494852 RTKN2Q8IZC4 609 aa21.25■□□□□ 0.99
COL4A2-209ENST00000494852 RSPH6AQ9H0K4 717 aa21.25■□□□□ 0.99
COL4A2-209ENST00000494852 PRAMEF22A3QJZ6 481 aa21.24■□□□□ 0.99
COL4A2-209ENST00000494852 ZNF277Q9NRM2 450 aaPredicted RBP21.24■□□□□ 0.99
COL4A2-209ENST00000494852 HACL1Q9UJ83 578 aa21.23■□□□□ 0.99
COL4A2-209ENST00000494852 NIP7Q9Y221 180 aaKnown RBP eCLIP21.23■□□□□ 0.99
COL4A2-209ENST00000494852 ZNF541Q9H0D2 1346 aa21.23■□□□□ 0.99
COL4A2-209ENST00000494852 ALDH1B1P30837 517 aa21.22■□□□□ 0.99
COL4A2-209ENST00000494852 VEGFBP49765 207 aa21.22■□□□□ 0.99
COL4A2-209ENST00000494852 PNMA8AQ86V59 439 aaPredicted RBP21.22■□□□□ 0.99
COL4A2-209ENST00000494852 AIDAQ96BJ3 306 aa21.22■□□□□ 0.99
COL4A2-209ENST00000494852 NBPF26B4DH59 902 aa21.21■□□□□ 0.99
COL4A2-209ENST00000494852 FZD9O00144 591 aa21.21■□□□□ 0.99
COL4A2-209ENST00000494852 EPHX2P34913 555 aa21.21■□□□□ 0.99
COL4A2-209ENST00000494852 CTCFP49711 727 aaPredicted RBP21.21■□□□□ 0.99
COL4A2-209ENST00000494852 EAPPQ56P03 285 aaPredicted RBP21.21■□□□□ 0.99
COL4A2-209ENST00000494852 NBPF10Q6P3W6 841 aaKnown RBP21.21■□□□□ 0.99
COL4A2-209ENST00000494852 NBPF15Q8N660 670 aa21.21■□□□□ 0.99
COL4A2-209ENST00000494852 RTF1Q92541 710 aaKnown RBP21.21■□□□□ 0.99
COL4A2-209ENST00000494852 CFAP53Q96M91 514 aa21.21■□□□□ 0.99
COL4A2-209ENST00000494852 ADAMTSL1Q8N6G6 1762 aa21.2■□□□□ 0.99
COL4A2-209ENST00000494852 CNGB1Q14028 1251 aaPredicted RBP21.2■□□□□ 0.98
COL4A2-209ENST00000494852 WBP1LQ9NX94 342 aa21.2■□□□□ 0.98
COL4A2-209ENST00000494852 CLEC11AQ9Y240 323 aa21.2■□□□□ 0.98
COL4A2-209ENST00000494852 IARSP41252 1262 aaKnown RBP21.19■□□□□ 0.98
COL4A2-209ENST00000494852 OLFM4Q6UX06 510 aa21.19■□□□□ 0.98
COL4A2-209ENST00000494852 MCM10Q7L590 875 aa21.19■□□□□ 0.98
COL4A2-209ENST00000494852 NUDCQ9Y266 331 aa21.19■□□□□ 0.98
COL4A2-209ENST00000494852 RASSF10A6NK89 507 aa21.18■□□□□ 0.98
COL4A2-209ENST00000494852 HTATSF1O43719 755 aaKnown RBP21.18■□□□□ 0.98
COL4A2-209ENST00000494852 CNTROBQ8N137 903 aa21.18■□□□□ 0.98
COL4A2-209ENST00000494852 GPC2Q8N158 579 aa21.18■□□□□ 0.98
COL4A2-209ENST00000494852 SYNE4Q8N205 404 aa21.18■□□□□ 0.98
COL4A2-209ENST00000494852 PSMD1Q99460 953 aa21.17■□□□□ 0.98
COL4A2-209ENST00000494852 SNED1Q8TER0 1413 aa21.16■□□□□ 0.98
COL4A2-209ENST00000494852 RNF123Q5XPI4 1314 aa21.16■□□□□ 0.98
COL4A2-209ENST00000494852 GTF2E1P29083 439 aaPredicted RBP21.16■□□□□ 0.98
COL4A2-209ENST00000494852 HLFQ16534 295 aa21.16■□□□□ 0.98
COL4A2-209ENST00000494852 DEFB115Q30KQ5 88 aa21.16■□□□□ 0.98
COL4A2-209ENST00000494852 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
COL4A2-209ENST00000494852 FAM177BA6PVY3 158 aa21.15■□□□□ 0.98
COL4A2-209ENST00000494852 U2AF1L5P0DN76 240 aaPredicted RBP21.15■□□□□ 0.98
COL4A2-209ENST00000494852 U2AF1Q01081 240 aaKnown RBP eCLIP21.15■□□□□ 0.98
COL4A2-209ENST00000494852 CC2D2BQ6DHV5 1058 aa21.15■□□□□ 0.98
COL4A2-209ENST00000494852 JDP2Q8WYK2 163 aa21.15■□□□□ 0.98
COL4A2-209ENST00000494852 TAF7Q15545 349 aaPredicted RBP21.14■□□□□ 0.97
COL4A2-209ENST00000494852 MAP1SQ66K74 1059 aaPredicted RBP21.14■□□□□ 0.97
COL4A2-209ENST00000494852 NYXQ9GZU5 481 aa21.14■□□□□ 0.97
COL4A2-209ENST00000494852 ERVV-1B6SEH8 477 aa21.13■□□□□ 0.97
COL4A2-209ENST00000494852 LBX1P52954 281 aa21.13■□□□□ 0.97
COL4A2-209ENST00000494852 DCTN1Q14203 1278 aa21.13■□□□□ 0.97
COL4A2-209ENST00000494852 MAP2K1Q02750 393 aaPredicted RBP21.12■□□□□ 0.97
COL4A2-209ENST00000494852 GRIPAP1Q4V328 841 aa21.12■□□□□ 0.97
COL4A2-209ENST00000494852 WDR33Q9C0J8 1336 aaKnown RBP21.11■□□□□ 0.97
COL4A2-209ENST00000494852 EIF6P56537 245 aaKnown RBP21.11■□□□□ 0.97
COL4A2-209ENST00000494852 HOXA10P31260 410 aaPredicted RBP21.1■□□□□ 0.97
COL4A2-209ENST00000494852 DDX21Q9NR30 783 aaKnown RBP eCLIP21.1■□□□□ 0.97
COL4A2-209ENST00000494852 ABCC12Q96J65 1359 aa21.1■□□□□ 0.97
COL4A2-209ENST00000494852 HSPA8P11142 646 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms