RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
CSNK1E-212ENST00000494610 SRGNP10124 158 aa15.73■□□□□ 0.11
CSNK1E-212ENST00000494610 IL6STP40189 918 aaPredicted RBP15.73■□□□□ 0.11
CSNK1E-212ENST00000494610 DDX10Q13206 875 aaKnown RBP15.73■□□□□ 0.11
CSNK1E-212ENST00000494610 CNBD1Q8NA66 436 aa15.73■□□□□ 0.11
CSNK1E-212ENST00000494610 SETDB2Q96T68 719 aa15.73■□□□□ 0.11
CSNK1E-212ENST00000494610 FAM177BA6PVY3 158 aa15.72■□□□□ 0.11
CSNK1E-212ENST00000494610 NPHP1O15259 732 aa15.72■□□□□ 0.11
CSNK1E-212ENST00000494610 DZIP3Q86Y13 1208 aaKnown RBP15.72■□□□□ 0.11
CSNK1E-212ENST00000494610 BCORQ6W2J9 1755 aa15.72■□□□□ 0.11
CSNK1E-212ENST00000494610 FOXN1O15353 648 aa15.71■□□□□ 0.11
CSNK1E-212ENST00000494610 SLC51AQ86UW1 340 aa15.71■□□□□ 0.11
CSNK1E-212ENST00000494610 C7orf43Q8WVR3 580 aa15.71■□□□□ 0.11
CSNK1E-212ENST00000494610 FMNL2Q96PY5 1086 aa15.71■□□□□ 0.11
CSNK1E-212ENST00000494610 ZNF541Q9H0D2 1346 aa15.7■□□□□ 0.1
CSNK1E-212ENST00000494610 BTBD11A6QL63 1104 aa15.7■□□□□ 0.1
CSNK1E-212ENST00000494610 STYK1Q6J9G0 422 aa15.7■□□□□ 0.1
CSNK1E-212ENST00000494610 ZNF277Q9NRM2 450 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-212ENST00000494610 CREBZFQ9NS37 354 aa15.7■□□□□ 0.1
CSNK1E-212ENST00000494610 LTBP3Q9NS15 1303 aa15.69■□□□□ 0.1
CSNK1E-212ENST00000494610 PRKAR2BP31323 418 aa15.69■□□□□ 0.1
CSNK1E-212ENST00000494610 ST5P78524 1137 aa15.69■□□□□ 0.1
CSNK1E-212ENST00000494610 DCTN1Q14203 1278 aa15.69■□□□□ 0.1
CSNK1E-212ENST00000494610 MCM10Q7L590 875 aa15.69■□□□□ 0.1
CSNK1E-212ENST00000494610 GAS2L2Q8NHY3 880 aa15.69■□□□□ 0.1
CSNK1E-212ENST00000494610 CNKSR1Q969H4 720 aa15.69■□□□□ 0.1
CSNK1E-212ENST00000494610 MASTLQ96GX5 879 aa15.69■□□□□ 0.1
CSNK1E-212ENST00000494610 TEX13AQ9BXU3 409 aaPredicted RBP15.69■□□□□ 0.1
CSNK1E-212ENST00000494610 ARFGEF2Q9Y6D5 1785 aa15.69■□□□□ 0.1
CSNK1E-212ENST00000494610 CEMIPQ8WUJ3 1361 aa15.68■□□□□ 0.1
CSNK1E-212ENST00000494610 NBPF26B4DH59 902 aa15.68■□□□□ 0.1
CSNK1E-212ENST00000494610 EAPPQ56P03 285 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-212ENST00000494610 NBPF10Q6P3W6 841 aaKnown RBP15.68■□□□□ 0.1
CSNK1E-212ENST00000494610 NBPF5PQ86XG9 351 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-212ENST00000494610 NBPF15Q8N660 670 aa15.68■□□□□ 0.1
CSNK1E-212ENST00000494610 TAF1DQ9H5J8 278 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-212ENST00000494610 PASKQ96RG2 1323 aa15.68■□□□□ 0.1
CSNK1E-212ENST00000494610 VEGFBP49765 207 aa15.67■□□□□ 0.1
CSNK1E-212ENST00000494610 CNTNAP1P78357 1384 aa15.66■□□□□ 0.1
CSNK1E-212ENST00000494610 ITGBL1O95965 494 aaPredicted RBP15.66■□□□□ 0.1
CSNK1E-212ENST00000494610 HLFQ16534 295 aa15.66■□□□□ 0.1
CSNK1E-212ENST00000494610 RSPH6AQ9H0K4 717 aa15.66■□□□□ 0.1
CSNK1E-212ENST00000494610 MIS18AQ9NYP9 233 aa15.66■□□□□ 0.1
CSNK1E-212ENST00000494610 PDZRN3Q9UPQ7 1066 aa15.66■□□□□ 0.1
CSNK1E-212ENST00000494610 ANP32CO43423 234 aa15.65■□□□□ 0.1
CSNK1E-212ENST00000494610 FMR1Q06787 632 aaKnown RBP eCLIP15.65■□□□□ 0.1
CSNK1E-212ENST00000494610 NPM2Q86SE8 214 aaKnown RBP15.65■□□□□ 0.1
CSNK1E-212ENST00000494610 CLEC11AQ9Y240 323 aa15.65■□□□□ 0.1
CSNK1E-212ENST00000494610 RNF123Q5XPI4 1314 aa15.65■□□□□ 0.1
CSNK1E-212ENST00000494610 CCDC93Q567U6 631 aa15.64■□□□□ 0.09
CSNK1E-212ENST00000494610 MAP1SQ66K74 1059 aaPredicted RBP15.64■□□□□ 0.09
CSNK1E-212ENST00000494610 LDHDQ86WU2 507 aa15.64■□□□□ 0.09
CSNK1E-212ENST00000494610 L3MBTL3Q96JM7 780 aaPredicted RBP15.64■□□□□ 0.09
CSNK1E-212ENST00000494610 NIP7Q9Y221 180 aaKnown RBP eCLIP15.64■□□□□ 0.09
CSNK1E-212ENST00000494610 SCN4AP35499 1836 aa15.64■□□□□ 0.09
CSNK1E-212ENST00000494610 COL4A5P29400 1685 aa15.63■□□□□ 0.09
CSNK1E-212ENST00000494610 NPR1P16066 1061 aa15.63■□□□□ 0.09
CSNK1E-212ENST00000494610 FKBP4Q02790 459 aaKnown RBP eCLIP15.63■□□□□ 0.09
CSNK1E-212ENST00000494610 NGEFQ8N5V2 710 aa15.63■□□□□ 0.09
CSNK1E-212ENST00000494610 KLRG2A4D1S0 409 aaPredicted RBP15.62■□□□□ 0.09
CSNK1E-212ENST00000494610 TMEM88BA6NKF7 163 aa15.62■□□□□ 0.09
CSNK1E-212ENST00000494610 NUTM1Q86Y26 1132 aa15.62■□□□□ 0.09
CSNK1E-212ENST00000494610 SYNE4Q8N205 404 aa15.62■□□□□ 0.09
CSNK1E-212ENST00000494610 ADAMTSL1Q8N6G6 1762 aa15.62■□□□□ 0.09
CSNK1E-212ENST00000494610 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
CSNK1E-212ENST00000494610 IQCA1LA6NCM1 817 aa15.61■□□□□ 0.09
CSNK1E-212ENST00000494610 SNRPA1P09661 255 aaKnown RBP15.61■□□□□ 0.09
CSNK1E-212ENST00000494610 EPHX2P34913 555 aa15.61■□□□□ 0.09
CSNK1E-212ENST00000494610 LBX1P52954 281 aa15.61■□□□□ 0.09
CSNK1E-212ENST00000494610 HACL1Q9UJ83 578 aa15.61■□□□□ 0.09
CSNK1E-212ENST00000494610 ABCC12Q96J65 1359 aa15.61■□□□□ 0.09
CSNK1E-212ENST00000494610 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
CSNK1E-212ENST00000494610 TCERG1O14776 1098 aaKnown RBP15.6■□□□□ 0.09
CSNK1E-212ENST00000494610 IARSP41252 1262 aaKnown RBP15.6■□□□□ 0.09
CSNK1E-212ENST00000494610 SOGA3Q5TF21 947 aa15.6■□□□□ 0.09
CSNK1E-212ENST00000494610 CLEC4GQ6UXB4 293 aa15.6■□□□□ 0.09
CSNK1E-212ENST00000494610 U2AF1L5P0DN76 240 aaPredicted RBP15.59■□□□□ 0.09
CSNK1E-212ENST00000494610 U2AF1Q01081 240 aaKnown RBP eCLIP15.59■□□□□ 0.09
CSNK1E-212ENST00000494610 TPTE2Q6XPS3 522 aa15.59■□□□□ 0.09
CSNK1E-212ENST00000494610 CNTROBQ8N137 903 aa15.59■□□□□ 0.09
CSNK1E-212ENST00000494610 WBP1LQ9NX94 342 aa15.59■□□□□ 0.09
CSNK1E-212ENST00000494610 GJA3Q9Y6H8 435 aa15.59■□□□□ 0.09
CSNK1E-212ENST00000494610 SNED1Q8TER0 1413 aa15.59■□□□□ 0.09
CSNK1E-212ENST00000494610 FZD9O00144 591 aa15.58■□□□□ 0.08
CSNK1E-212ENST00000494610 TTLL7Q6ZT98 887 aa15.58■□□□□ 0.08
CSNK1E-212ENST00000494610 ZNF652Q9Y2D9 606 aa15.58■□□□□ 0.08
CSNK1E-212ENST00000494610 GPTP24298 496 aa15.57■□□□□ 0.08
CSNK1E-212ENST00000494610 CTCFP49711 727 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-212ENST00000494610 C3orf67Q6ZVT6 689 aa15.57■□□□□ 0.08
CSNK1E-212ENST00000494610 RTF1Q92541 710 aaKnown RBP15.57■□□□□ 0.08
CSNK1E-212ENST00000494610 PRDM10Q9NQV6 1147 aa15.57■□□□□ 0.08
CSNK1E-212ENST00000494610 TRAF5O00463 557 aa15.56■□□□□ 0.08
CSNK1E-212ENST00000494610 HSPA8P11142 646 aaKnown RBP15.56■□□□□ 0.08
CSNK1E-212ENST00000494610 GTF2E1P29083 439 aaPredicted RBP15.56■□□□□ 0.08
CSNK1E-212ENST00000494610 EPS15P42566 896 aa15.56■□□□□ 0.08
CSNK1E-212ENST00000494610 GRM1Q13255 1194 aa15.56■□□□□ 0.08
CSNK1E-212ENST00000494610 DEFB115Q30KQ5 88 aa15.56■□□□□ 0.08
CSNK1E-212ENST00000494610 RTKN2Q8IZC4 609 aa15.56■□□□□ 0.08
CSNK1E-212ENST00000494610 AIDAQ96BJ3 306 aa15.56■□□□□ 0.08
CSNK1E-212ENST00000494610 NUP98P52948 1817 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms