RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 DNAAF4Q8WXU2 420 aa13.69□□□□□ -0.22
ZIC4-216ENST00000494569 DDX21Q9NR30 783 aaKnown RBP eCLIP13.69□□□□□ -0.22
ZIC4-216ENST00000494569 PCDH11XQ9BZA7 1347 aa13.69□□□□□ -0.22
ZIC4-216ENST00000494569 PCDH11YQ9BZA8 1340 aa13.69□□□□□ -0.22
ZIC4-216ENST00000494569 SRCAPQ6ZRS2 3230 aa13.69□□□□□ -0.22
ZIC4-216ENST00000494569 NFATC2IPQ8NCF5 419 aa13.69□□□□□ -0.22
ZIC4-216ENST00000494569 PRDM11Q9NQV5 511 aa13.69□□□□□ -0.22
ZIC4-216ENST00000494569 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
ZIC4-216ENST00000494569 EN1Q05925 392 aaPredicted RBP13.69□□□□□ -0.22
ZIC4-216ENST00000494569 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
ZIC4-216ENST00000494569 BTG4Q9NY30 223 aa13.69□□□□□ -0.22
ZIC4-216ENST00000494569 MTX1Q13505 466 aa13.68□□□□□ -0.22
ZIC4-216ENST00000494569 ZNF831Q5JPB2 1677 aa13.68□□□□□ -0.22
ZIC4-216ENST00000494569 CSB-PGBD3P0DP91 1061 aa13.68□□□□□ -0.22
ZIC4-216ENST00000494569 EIF2S2P20042 333 aaKnown RBP13.68□□□□□ -0.22
ZIC4-216ENST00000494569 PI4KAP2A4QPH2 592 aa13.67□□□□□ -0.22
ZIC4-216ENST00000494569 TTC22Q5TAA0 569 aa13.67□□□□□ -0.22
ZIC4-216ENST00000494569 KSR2Q6VAB6 950 aa13.67□□□□□ -0.22
ZIC4-216ENST00000494569 PI4KAP1Q8N8J0 262 aa13.67□□□□□ -0.22
ZIC4-216ENST00000494569 CAMKK2Q96RR4 588 aa13.67□□□□□ -0.22
ZIC4-216ENST00000494569 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
ZIC4-216ENST00000494569 RGPD3A6NKT7 1758 aaPredicted RBP13.67□□□□□ -0.22
ZIC4-216ENST00000494569 RGPD4Q7Z3J3 1758 aa13.67□□□□□ -0.22
ZIC4-216ENST00000494569 DDX60Q8IY21 1712 aaKnown RBP13.67□□□□□ -0.22
ZIC4-216ENST00000494569 ALDH1L1O75891 902 aa13.67□□□□□ -0.22
ZIC4-216ENST00000494569 C16orf71Q8IYS4 520 aaPredicted RBP13.67□□□□□ -0.22
ZIC4-216ENST00000494569 ERVV-2B6SEH9 535 aa13.67□□□□□ -0.22
ZIC4-216ENST00000494569 HMMRO75330 724 aa13.67□□□□□ -0.22
ZIC4-216ENST00000494569 ZNF496Q96IT1 587 aaPredicted RBP13.67□□□□□ -0.22
ZIC4-216ENST00000494569 LRRFIP2Q9Y608 721 aaKnown RBP13.67□□□□□ -0.22
ZIC4-216ENST00000494569 SLC39A6Q13433 755 aa13.66□□□□□ -0.22
ZIC4-216ENST00000494569 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
ZIC4-216ENST00000494569 ZCRB1Q8TBF4 217 aaKnown RBP13.66□□□□□ -0.22
ZIC4-216ENST00000494569 COL15A1P39059 1388 aa13.66□□□□□ -0.22
ZIC4-216ENST00000494569 R3HDM1Q15032 1099 aaKnown RBP13.66□□□□□ -0.22
ZIC4-216ENST00000494569 FAM196AQ6ZSG2 479 aa13.66□□□□□ -0.22
ZIC4-216ENST00000494569 OTUD7AQ8TE49 926 aaPredicted RBP13.66□□□□□ -0.22
ZIC4-216ENST00000494569 ANXA1P04083 346 aa13.66□□□□□ -0.22
ZIC4-216ENST00000494569 IL2RBP14784 551 aa13.66□□□□□ -0.22
ZIC4-216ENST00000494569 SPATA31A1Q5TZJ5 1347 aa13.65□□□□□ -0.22
ZIC4-216ENST00000494569 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
ZIC4-216ENST00000494569 A0A0G2JS52 829 aa13.65□□□□□ -0.22
ZIC4-216ENST00000494569 NBPF7P0C2Y1 421 aaPredicted RBP13.65□□□□□ -0.22
ZIC4-216ENST00000494569 TOM1L2Q6ZVM7 507 aa13.64□□□□□ -0.23
ZIC4-216ENST00000494569 USP35Q9P2H5 1018 aa13.64□□□□□ -0.23
ZIC4-216ENST00000494569 STAP2Q9UGK3 403 aa13.64□□□□□ -0.23
ZIC4-216ENST00000494569 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
ZIC4-216ENST00000494569 SMARCA5O60264 1052 aaPredicted RBP13.64□□□□□ -0.23
ZIC4-216ENST00000494569 SNRPA1P09661 255 aaKnown RBP13.64□□□□□ -0.23
ZIC4-216ENST00000494569 UBTFL1P0CB47 393 aaPredicted RBP13.64□□□□□ -0.23
ZIC4-216ENST00000494569 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
ZIC4-216ENST00000494569 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
ZIC4-216ENST00000494569 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
ZIC4-216ENST00000494569 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
ZIC4-216ENST00000494569 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
ZIC4-216ENST00000494569 FMNL2Q96PY5 1086 aa13.63□□□□□ -0.23
ZIC4-216ENST00000494569 TBC1D2Q9BYX2 928 aa13.63□□□□□ -0.23
ZIC4-216ENST00000494569 IGKV5-2P06315 115 aa13.62□□□□□ -0.23
ZIC4-216ENST00000494569 NFKBIBQ15653 356 aa13.62□□□□□ -0.23
ZIC4-216ENST00000494569 USP16Q9Y5T5 823 aa13.62□□□□□ -0.23
ZIC4-216ENST00000494569 LINS1Q8NG48 757 aa13.62□□□□□ -0.23
ZIC4-216ENST00000494569 SNX21Q969T3 373 aa13.62□□□□□ -0.23
ZIC4-216ENST00000494569 C22orf23Q9BZE7 217 aa13.62□□□□□ -0.23
ZIC4-216ENST00000494569 AOX1Q06278 1338 aa13.62□□□□□ -0.23
ZIC4-216ENST00000494569 USP42Q9H9J4 1324 aaKnown RBP13.62□□□□□ -0.23
ZIC4-216ENST00000494569 CABP4P57796 275 aa13.61□□□□□ -0.23
ZIC4-216ENST00000494569 COL5A3P25940 1745 aaPredicted RBP13.61□□□□□ -0.23
ZIC4-216ENST00000494569 LAMB2P55268 1798 aa13.61□□□□□ -0.23
ZIC4-216ENST00000494569 PDE1AP54750 535 aa13.61□□□□□ -0.23
ZIC4-216ENST00000494569 DOT1LQ8TEK3 1739 aa13.61□□□□□ -0.23
ZIC4-216ENST00000494569 A0A1B0GUL6 1792 aa13.61□□□□□ -0.23
ZIC4-216ENST00000494569 CDC45O75419 566 aa13.61□□□□□ -0.23
ZIC4-216ENST00000494569 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
ZIC4-216ENST00000494569 RAB11FIP3O75154 756 aa13.6□□□□□ -0.23
ZIC4-216ENST00000494569 IL27Q8NEV9 243 aa13.6□□□□□ -0.23
ZIC4-216ENST00000494569 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
ZIC4-216ENST00000494569 BRD2P25440 801 aaKnown RBP13.6□□□□□ -0.23
ZIC4-216ENST00000494569 EXOC6BQ9Y2D4 811 aa13.6□□□□□ -0.23
ZIC4-216ENST00000494569 ARAP2Q8WZ64 1704 aa13.6□□□□□ -0.23
ZIC4-216ENST00000494569 SDSP20132 328 aa13.59□□□□□ -0.23
ZIC4-216ENST00000494569 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
ZIC4-216ENST00000494569 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
ZIC4-216ENST00000494569 METTL22Q9BUU2 404 aaPredicted RBP13.59□□□□□ -0.23
ZIC4-216ENST00000494569 UPF2Q9HAU5 1272 aaKnown RBP13.59□□□□□ -0.23
ZIC4-216ENST00000494569 NEURL1BA8MQ27 555 aa13.58□□□□□ -0.24
ZIC4-216ENST00000494569 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
ZIC4-216ENST00000494569 MFAP1P55081 439 aaKnown RBP13.58□□□□□ -0.24
ZIC4-216ENST00000494569 NBPF14Q5TI25 921 aa13.58□□□□□ -0.24
ZIC4-216ENST00000494569 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
ZIC4-216ENST00000494569 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
ZIC4-216ENST00000494569 DDX58O95786 925 aaKnown RBP13.58□□□□□ -0.24
ZIC4-216ENST00000494569 YY1P25490 414 aa13.58□□□□□ -0.24
ZIC4-216ENST00000494569 CWF19L2Q2TBE0 894 aaKnown RBP13.58□□□□□ -0.24
ZIC4-216ENST00000494569 XAGE3Q8WTP9 111 aa13.58□□□□□ -0.24
ZIC4-216ENST00000494569 BCORQ6W2J9 1755 aa13.58□□□□□ -0.24
ZIC4-216ENST00000494569 BCL9O00512 1426 aa13.58□□□□□ -0.24
ZIC4-216ENST00000494569 TRIM37O94972 964 aa13.57□□□□□ -0.24
ZIC4-216ENST00000494569 CASP7P55210 303 aa13.57□□□□□ -0.24
ZIC4-216ENST00000494569 GRM8O00222 908 aa13.57□□□□□ -0.24
ZIC4-216ENST00000494569 APBA3O96018 575 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms