RNA–Protein interactions for RNA: ENST00000494057.5

NICN1-206, Transcript of nicolin 1, humanhuman

TSL 2

Gene NICN1, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-206ENST00000494057 POTEIP0CG38 1075 aa20.21■□□□□ 0.83
NICN1-206ENST00000494057 POTEJP0CG39 1038 aa20.21■□□□□ 0.83
NICN1-206ENST00000494057 CC2D1BQ5T0F9 858 aaKnown RBP20.21■□□□□ 0.83
NICN1-206ENST00000494057 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
NICN1-206ENST00000494057 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
NICN1-206ENST00000494057 LDHDQ86WU2 507 aa20.2■□□□□ 0.82
NICN1-206ENST00000494057 ARFGEF2Q9Y6D5 1785 aa20.2■□□□□ 0.82
NICN1-206ENST00000494057 CNTNAP1P78357 1384 aa20.2■□□□□ 0.82
NICN1-206ENST00000494057 BCORQ6W2J9 1755 aa20.19■□□□□ 0.82
NICN1-206ENST00000494057 PER1O15534 1290 aaPredicted RBP20.19■□□□□ 0.82
NICN1-206ENST00000494057 DZIP3Q86Y13 1208 aaKnown RBP20.19■□□□□ 0.82
NICN1-206ENST00000494057 L3MBTL3Q96JM7 780 aaPredicted RBP20.19■□□□□ 0.82
NICN1-206ENST00000494057 CEMIPQ8WUJ3 1361 aa20.19■□□□□ 0.82
NICN1-206ENST00000494057 SLX4Q8IY92 1834 aa20.18■□□□□ 0.82
NICN1-206ENST00000494057 CCDC93Q567U6 631 aa20.18■□□□□ 0.82
NICN1-206ENST00000494057 BTBD11A6QL63 1104 aa20.17■□□□□ 0.82
NICN1-206ENST00000494057 NBPF5PQ86XG9 351 aaPredicted RBP20.17■□□□□ 0.82
NICN1-206ENST00000494057 ZNF652Q9Y2D9 606 aa20.17■□□□□ 0.82
NICN1-206ENST00000494057 PASKQ96RG2 1323 aa20.17■□□□□ 0.82
NICN1-206ENST00000494057 CLEC4GQ6UXB4 293 aa20.16■□□□□ 0.82
NICN1-206ENST00000494057 TAF1DQ9H5J8 278 aaPredicted RBP20.16■□□□□ 0.82
NICN1-206ENST00000494057 CACNA1SQ13698 1873 aa20.16■□□□□ 0.82
NICN1-206ENST00000494057 NPR1P16066 1061 aa20.15■□□□□ 0.82
NICN1-206ENST00000494057 C7orf43Q8WVR3 580 aa20.15■□□□□ 0.82
NICN1-206ENST00000494057 SCN4AP35499 1836 aa20.15■□□□□ 0.82
NICN1-206ENST00000494057 NPC1L1Q9UHC9 1359 aa20.14■□□□□ 0.81
NICN1-206ENST00000494057 FOXN1O15353 648 aa20.14■□□□□ 0.81
NICN1-206ENST00000494057 FKBP4Q02790 459 aaKnown RBP eCLIP20.14■□□□□ 0.81
NICN1-206ENST00000494057 AIDAQ96BJ3 306 aa20.14■□□□□ 0.81
NICN1-206ENST00000494057 PRDM10Q9NQV6 1147 aa20.14■□□□□ 0.81
NICN1-206ENST00000494057 TMEM88BA6NKF7 163 aa20.13■□□□□ 0.81
NICN1-206ENST00000494057 KCNQ3O43525 872 aa20.13■□□□□ 0.81
NICN1-206ENST00000494057 KLRG2A4D1S0 409 aaPredicted RBP20.12■□□□□ 0.81
NICN1-206ENST00000494057 USP16Q9Y5T5 823 aa20.12■□□□□ 0.81
NICN1-206ENST00000494057 ZNF541Q9H0D2 1346 aa20.11■□□□□ 0.81
NICN1-206ENST00000494057 RGL2O15211 777 aa20.11■□□□□ 0.81
NICN1-206ENST00000494057 SNRPA1P09661 255 aaKnown RBP20.11■□□□□ 0.81
NICN1-206ENST00000494057 PIP4K2AP48426 406 aaPredicted RBP20.11■□□□□ 0.81
NICN1-206ENST00000494057 CTCFP49711 727 aaPredicted RBP20.11■□□□□ 0.81
NICN1-206ENST00000494057 EAPPQ56P03 285 aaPredicted RBP20.11■□□□□ 0.81
NICN1-206ENST00000494057 TPTE2Q6XPS3 522 aa20.11■□□□□ 0.81
NICN1-206ENST00000494057 RTKN2Q8IZC4 609 aa20.11■□□□□ 0.81
NICN1-206ENST00000494057 CCER1Q8TC90 406 aaPredicted RBP20.11■□□□□ 0.81
NICN1-206ENST00000494057 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
NICN1-206ENST00000494057 HACL1Q9UJ83 578 aa20.11■□□□□ 0.81
NICN1-206ENST00000494057 ITGBL1O95965 494 aaPredicted RBP20.1■□□□□ 0.81
NICN1-206ENST00000494057 PRKAR2BP31323 418 aa20.1■□□□□ 0.81
NICN1-206ENST00000494057 VEGFBP49765 207 aa20.1■□□□□ 0.81
NICN1-206ENST00000494057 PHACTR3Q96KR7 559 aa20.1■□□□□ 0.81
NICN1-206ENST00000494057 EPHX2P34913 555 aa20.09■□□□□ 0.81
NICN1-206ENST00000494057 CNGB1Q14028 1251 aaPredicted RBP20.09■□□□□ 0.81
NICN1-206ENST00000494057 PNMA8AQ86V59 439 aaPredicted RBP20.09■□□□□ 0.81
NICN1-206ENST00000494057 RSPH6AQ9H0K4 717 aa20.09■□□□□ 0.81
NICN1-206ENST00000494057 NIP7Q9Y221 180 aaKnown RBP eCLIP20.09■□□□□ 0.81
NICN1-206ENST00000494057 CLEC11AQ9Y240 323 aa20.09■□□□□ 0.81
NICN1-206ENST00000494057 PRAMEF22A3QJZ6 481 aa20.08■□□□□ 0.81
NICN1-206ENST00000494057 RTF1Q92541 710 aaKnown RBP20.08■□□□□ 0.81
NICN1-206ENST00000494057 ALDH1B1P30837 517 aa20.07■□□□□ 0.8
NICN1-206ENST00000494057 IARSP41252 1262 aaKnown RBP20.07■□□□□ 0.8
NICN1-206ENST00000494057 CFAP53Q96M91 514 aa20.07■□□□□ 0.8
NICN1-206ENST00000494057 ADAMTSL1Q8N6G6 1762 aa20.07■□□□□ 0.8
NICN1-206ENST00000494057 RNF123Q5XPI4 1314 aa20.06■□□□□ 0.8
NICN1-206ENST00000494057 FZD9O00144 591 aa20.06■□□□□ 0.8
NICN1-206ENST00000494057 OLFM4Q6UX06 510 aa20.06■□□□□ 0.8
NICN1-206ENST00000494057 WBP1LQ9NX94 342 aa20.06■□□□□ 0.8
NICN1-206ENST00000494057 RASSF10A6NK89 507 aa20.05■□□□□ 0.8
NICN1-206ENST00000494057 CNTROBQ8N137 903 aa20.05■□□□□ 0.8
NICN1-206ENST00000494057 GPC2Q8N158 579 aa20.05■□□□□ 0.8
NICN1-206ENST00000494057 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
NICN1-206ENST00000494057 NBPF26B4DH59 902 aa20.04■□□□□ 0.8
NICN1-206ENST00000494057 GTF2E1P29083 439 aaPredicted RBP20.04■□□□□ 0.8
NICN1-206ENST00000494057 NBPF10Q6P3W6 841 aaKnown RBP20.04■□□□□ 0.8
NICN1-206ENST00000494057 MCM10Q7L590 875 aa20.04■□□□□ 0.8
NICN1-206ENST00000494057 SYNE4Q8N205 404 aa20.04■□□□□ 0.8
NICN1-206ENST00000494057 NBPF15Q8N660 670 aa20.04■□□□□ 0.8
NICN1-206ENST00000494057 NUDCQ9Y266 331 aa20.04■□□□□ 0.8
NICN1-206ENST00000494057 LBX1P52954 281 aa20.03■□□□□ 0.8
NICN1-206ENST00000494057 DEFB115Q30KQ5 88 aa20.03■□□□□ 0.8
NICN1-206ENST00000494057 MAP1SQ66K74 1059 aaPredicted RBP20.03■□□□□ 0.8
NICN1-206ENST00000494057 JDP2Q8WYK2 163 aa20.03■□□□□ 0.8
NICN1-206ENST00000494057 PSMD1Q99460 953 aa20.03■□□□□ 0.8
NICN1-206ENST00000494057 NYXQ9GZU5 481 aa20.02■□□□□ 0.8
NICN1-206ENST00000494057 SNED1Q8TER0 1413 aa20.02■□□□□ 0.79
NICN1-206ENST00000494057 MAP2K1Q02750 393 aaPredicted RBP20.01■□□□□ 0.79
NICN1-206ENST00000494057 HLFQ16534 295 aa20.01■□□□□ 0.79
NICN1-206ENST00000494057 CRY2Q49AN0 593 aa20.01■□□□□ 0.79
NICN1-206ENST00000494057 ABT1Q9ULW3 272 aaKnown RBP20.01■□□□□ 0.79
NICN1-206ENST00000494057 HTATSF1O43719 755 aaKnown RBP20■□□□□ 0.79
NICN1-206ENST00000494057 U2AF1L5P0DN76 240 aaPredicted RBP20■□□□□ 0.79
NICN1-206ENST00000494057 EIF6P56537 245 aaKnown RBP20■□□□□ 0.79
NICN1-206ENST00000494057 U2AF1Q01081 240 aaKnown RBP eCLIP20■□□□□ 0.79
NICN1-206ENST00000494057 CC2D2BQ6DHV5 1058 aa20■□□□□ 0.79
NICN1-206ENST00000494057 WDR33Q9C0J8 1336 aaKnown RBP20■□□□□ 0.79
NICN1-206ENST00000494057 HSPA8P11142 646 aaKnown RBP19.99■□□□□ 0.79
NICN1-206ENST00000494057 LMOD1P29536 600 aaPredicted RBP19.99■□□□□ 0.79
NICN1-206ENST00000494057 ABCC12Q96J65 1359 aa19.98■□□□□ 0.79
NICN1-206ENST00000494057 DCTN1Q14203 1278 aa19.98■□□□□ 0.79
NICN1-206ENST00000494057 GRIPAP1Q4V328 841 aa19.98■□□□□ 0.79
NICN1-206ENST00000494057 DDX21Q9NR30 783 aaKnown RBP eCLIP19.98■□□□□ 0.79
NICN1-206ENST00000494057 GJA3Q9Y6H8 435 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms