RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 NPHP1O15259 732 aa13.47□□□□□ -0.25
NR1H3-225ENST00000494018 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
NR1H3-225ENST00000494018 EPS15P42566 896 aa13.47□□□□□ -0.25
NR1H3-225ENST00000494018 SLC39A6Q13433 755 aa13.47□□□□□ -0.25
NR1H3-225ENST00000494018 HABP4Q5JVS0 413 aaKnown RBP13.47□□□□□ -0.25
NR1H3-225ENST00000494018 CNKSR1Q969H4 720 aa13.47□□□□□ -0.25
NR1H3-225ENST00000494018 KIF24Q5T7B8 1368 aa13.46□□□□□ -0.25
NR1H3-225ENST00000494018 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
NR1H3-225ENST00000494018 CA12O43570 354 aa13.46□□□□□ -0.25
NR1H3-225ENST00000494018 CELF2O95319 508 aaKnown RBP13.46□□□□□ -0.25
NR1H3-225ENST00000494018 EIF4A2Q14240 407 aaKnown RBP13.46□□□□□ -0.25
NR1H3-225ENST00000494018 PUS7Q96PZ0 661 aaKnown RBP13.46□□□□□ -0.25
NR1H3-225ENST00000494018 ZNF408Q9H9D4 720 aa13.46□□□□□ -0.25
NR1H3-225ENST00000494018 ZNF330Q9Y3S2 320 aaPredicted RBP13.46□□□□□ -0.25
NR1H3-225ENST00000494018 SRGNP10124 158 aa13.45□□□□□ -0.26
NR1H3-225ENST00000494018 TNNT2P45379 298 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-225ENST00000494018 BRPF1P55201 1214 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-225ENST00000494018 PLEKHO1Q53GL0 409 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-225ENST00000494018 SAPCD2Q86UD0 394 aa13.45□□□□□ -0.26
NR1H3-225ENST00000494018 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
NR1H3-225ENST00000494018 FKBP4Q02790 459 aaKnown RBP eCLIP13.44□□□□□ -0.26
NR1H3-225ENST00000494018 CCDC93Q567U6 631 aa13.44□□□□□ -0.26
NR1H3-225ENST00000494018 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
NR1H3-225ENST00000494018 TESK2Q96S53 571 aa13.44□□□□□ -0.26
NR1H3-225ENST00000494018 TBC1D2BQ9UPU7 963 aa13.44□□□□□ -0.26
NR1H3-225ENST00000494018 ARFGEF2Q9Y6D5 1785 aa13.44□□□□□ -0.26
NR1H3-225ENST00000494018 LMOD1P29536 600 aaPredicted RBP13.43□□□□□ -0.26
NR1H3-225ENST00000494018 C1orf141Q5JVX7 400 aa13.43□□□□□ -0.26
NR1H3-225ENST00000494018 SOGA3Q5TF21 947 aa13.43□□□□□ -0.26
NR1H3-225ENST00000494018 GPC2Q8N158 579 aa13.43□□□□□ -0.26
NR1H3-225ENST00000494018 SYNE4Q8N205 404 aa13.43□□□□□ -0.26
NR1H3-225ENST00000494018 C7orf43Q8WVR3 580 aa13.43□□□□□ -0.26
NR1H3-225ENST00000494018 MASTLQ96GX5 879 aa13.43□□□□□ -0.26
NR1H3-225ENST00000494018 GLIS2Q9BZE0 524 aaPredicted RBP13.43□□□□□ -0.26
NR1H3-225ENST00000494018 FZD9O00144 591 aa13.42□□□□□ -0.26
NR1H3-225ENST00000494018 IARSP41252 1262 aaKnown RBP13.42□□□□□ -0.26
NR1H3-225ENST00000494018 NBPF15Q8N660 670 aa13.42□□□□□ -0.26
NR1H3-225ENST00000494018 CARD14Q9BXL6 1004 aa13.42□□□□□ -0.26
NR1H3-225ENST00000494018 POLKQ9UBT6 870 aa13.42□□□□□ -0.26
NR1H3-225ENST00000494018 DLK2Q6UY11 383 aa13.41□□□□□ -0.26
NR1H3-225ENST00000494018 AEBP1Q8IUX7 1158 aa13.41□□□□□ -0.26
NR1H3-225ENST00000494018 CNBD1Q8NA66 436 aa13.41□□□□□ -0.26
NR1H3-225ENST00000494018 PDZRN3Q9UPQ7 1066 aa13.41□□□□□ -0.26
NR1H3-225ENST00000494018 COL4A5P29400 1685 aa13.4□□□□□ -0.26
NR1H3-225ENST00000494018 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
NR1H3-225ENST00000494018 TRPA1O75762 1119 aa13.4□□□□□ -0.26
NR1H3-225ENST00000494018 SCNN1DP51172 638 aa13.4□□□□□ -0.26
NR1H3-225ENST00000494018 GCC1Q96CN9 775 aa13.4□□□□□ -0.26
NR1H3-225ENST00000494018 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
NR1H3-225ENST00000494018 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
NR1H3-225ENST00000494018 ST5P78524 1137 aa13.39□□□□□ -0.27
NR1H3-225ENST00000494018 SLC51AQ86UW1 340 aa13.39□□□□□ -0.27
NR1H3-225ENST00000494018 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
NR1H3-225ENST00000494018 MKI67P46013 3256 aaKnown RBP13.39□□□□□ -0.27
NR1H3-225ENST00000494018 DLL1O00548 723 aa13.38□□□□□ -0.27
NR1H3-225ENST00000494018 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
NR1H3-225ENST00000494018 JDP2Q8WYK2 163 aa13.38□□□□□ -0.27
NR1H3-225ENST00000494018 SETDB2Q96T68 719 aa13.38□□□□□ -0.27
NR1H3-225ENST00000494018 AKAP11Q9UKA4 1901 aa13.37□□□□□ -0.27
NR1H3-225ENST00000494018 FAM177BA6PVY3 158 aa13.37□□□□□ -0.27
NR1H3-225ENST00000494018 EIF5P55010 431 aaKnown RBP13.37□□□□□ -0.27
NR1H3-225ENST00000494018 NOGQ13253 232 aa13.36□□□□□ -0.27
NR1H3-225ENST00000494018 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
NR1H3-225ENST00000494018 USP50Q70EL3 339 aaPredicted RBP13.36□□□□□ -0.27
NR1H3-225ENST00000494018 RNF186Q9NXI6 227 aa13.36□□□□□ -0.27
NR1H3-225ENST00000494018 SCN7AQ01118 1682 aa13.36□□□□□ -0.27
NR1H3-225ENST00000494018 A0A087WZG4 1122 aa13.35□□□□□ -0.27
NR1H3-225ENST00000494018 NPR1P16066 1061 aa13.35□□□□□ -0.27
NR1H3-225ENST00000494018 HUNKP57058 714 aa13.35□□□□□ -0.27
NR1H3-225ENST00000494018 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
NR1H3-225ENST00000494018 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
NR1H3-225ENST00000494018 RTKN2Q8IZC4 609 aa13.35□□□□□ -0.27
NR1H3-225ENST00000494018 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
NR1H3-225ENST00000494018 BCORQ6W2J9 1755 aa13.35□□□□□ -0.27
NR1H3-225ENST00000494018 TCERG1O14776 1098 aaKnown RBP13.34□□□□□ -0.27
NR1H3-225ENST00000494018 SZT2Q5T011 3432 aa13.34□□□□□ -0.27
NR1H3-225ENST00000494018 PIP4K2AP48426 406 aaPredicted RBP13.33□□□□□ -0.28
NR1H3-225ENST00000494018 NBPF5PQ86XG9 351 aaPredicted RBP13.33□□□□□ -0.28
NR1H3-225ENST00000494018 LARGE2Q8N3Y3 721 aa13.33□□□□□ -0.28
NR1H3-225ENST00000494018 FAM155AB1AL88 458 aaPredicted RBP13.32□□□□□ -0.28
NR1H3-225ENST00000494018 AKAP4Q5JQC9 854 aa13.32□□□□□ -0.28
NR1H3-225ENST00000494018 SULT6B1Q6IMI4 303 aa13.32□□□□□ -0.28
NR1H3-225ENST00000494018 HHIPL1Q96JK4 782 aa13.32□□□□□ -0.28
NR1H3-225ENST00000494018 POLR2AP24928 1970 aaKnown RBP13.32□□□□□ -0.28
NR1H3-225ENST00000494018 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
NR1H3-225ENST00000494018 STARD3NLO95772 234 aa13.31□□□□□ -0.28
NR1H3-225ENST00000494018 A1BGP04217 495 aa13.31□□□□□ -0.28
NR1H3-225ENST00000494018 USP48Q86UV5 1035 aa13.31□□□□□ -0.28
NR1H3-225ENST00000494018 ADARB2Q9NS39 739 aaKnown RBP13.31□□□□□ -0.28
NR1H3-225ENST00000494018 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
NR1H3-225ENST00000494018 SHTN1A0MZ66 631 aa13.3□□□□□ -0.28
NR1H3-225ENST00000494018 RNMTO43148 476 aaKnown RBP13.3□□□□□ -0.28
NR1H3-225ENST00000494018 HIRAP54198 1017 aaPredicted RBP13.3□□□□□ -0.28
NR1H3-225ENST00000494018 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
NR1H3-225ENST00000494018 ZNF157P51786 506 aaPredicted RBP13.29□□□□□ -0.28
NR1H3-225ENST00000494018 RGMBQ6NW40 437 aa13.29□□□□□ -0.28
NR1H3-225ENST00000494018 TRPM4Q8TD43 1214 aa13.29□□□□□ -0.28
NR1H3-225ENST00000494018 SAGE1Q9NXZ1 904 aa13.29□□□□□ -0.28
NR1H3-225ENST00000494018 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
NR1H3-225ENST00000494018 GMPSP49915 693 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms