RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 MYO19Q96H55 970 aa6.7□□□□□ -1.34
GTF3A-208ENST00000493903 C2orf49Q9BVC5 232 aaPredicted RBP6.7□□□□□ -1.34
GTF3A-208ENST00000493903 CCDC87Q9NVE4 849 aa6.7□□□□□ -1.34
GTF3A-208ENST00000493903 NLRP2Q9NX02 1062 aa6.7□□□□□ -1.34
GTF3A-208ENST00000493903 SCHIP1Q9P0W5 487 aaPredicted RBP6.7□□□□□ -1.34
GTF3A-208ENST00000493903 A0A1W2PRU2 124 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 TNFRSF10BO14763 440 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 UPP2O95045 317 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 GNRH1P01148 92 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 BMP2P12643 396 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 SNRPBP14678 240 aaKnown RBP6.69□□□□□ -1.34
GTF3A-208ENST00000493903 USP5P45974 858 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 FANCCQ00597 558 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 SCARF1Q14162 830 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 COX20Q5RI15 118 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 C9orf131Q5VYM1 1079 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 CYP2U1Q7Z449 544 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 CHMP7Q8WUX9 453 aaPredicted RBP6.69□□□□□ -1.34
GTF3A-208ENST00000493903 ARMC5Q96C12 935 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 TRIM47Q96LD4 638 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 TSEN34Q9BSV6 310 aaKnown RBP6.69□□□□□ -1.34
GTF3A-208ENST00000493903 SENP2Q9HC62 589 aa6.69□□□□□ -1.34
GTF3A-208ENST00000493903 GPR182O15218 404 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 ADH1AP07327 375 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 PSMA6P60900 246 aaKnown RBP6.68□□□□□ -1.34
GTF3A-208ENST00000493903 RELBQ01201 579 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 MTFR1Q15390 333 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 ENOX2Q16206 610 aaKnown RBP6.68□□□□□ -1.34
GTF3A-208ENST00000493903 FBF1Q8TES7 1133 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 FRMD6Q96NE9 622 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 TINF2Q9BSI4 451 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 TANGO6Q9C0B7 1094 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 ETNK1Q9HBU6 452 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 CUEDC1Q9NWM3 386 aaPredicted RBP6.68□□□□□ -1.34
GTF3A-208ENST00000493903 VTI1BQ9UEU0 232 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 SERTAD1Q9UHV2 236 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 CHMP3Q9Y3E7 222 aa6.68□□□□□ -1.34
GTF3A-208ENST00000493903 A6NJY4 79 aa6.67□□□□□ -1.34
GTF3A-208ENST00000493903 NCLP19338 710 aaKnown RBP6.67□□□□□ -1.34
GTF3A-208ENST00000493903 BRD2P25440 801 aaKnown RBP6.67□□□□□ -1.34
GTF3A-208ENST00000493903 ZNF76P36508 570 aa6.67□□□□□ -1.34
GTF3A-208ENST00000493903 POTEAQ6S8J7 498 aa6.67□□□□□ -1.34
GTF3A-208ENST00000493903 SLC9A9Q8IVB4 645 aa6.67□□□□□ -1.34
GTF3A-208ENST00000493903 KDF1Q8NAX2 398 aaPredicted RBP6.67□□□□□ -1.34
GTF3A-208ENST00000493903 KIFC2Q96AC6 838 aa6.67□□□□□ -1.34
GTF3A-208ENST00000493903 CCSER2Q9H7U1 834 aa6.67□□□□□ -1.34
GTF3A-208ENST00000493903 ZNF395Q9H8N7 513 aaPredicted RBP6.67□□□□□ -1.34
GTF3A-208ENST00000493903 SMTNP53814 917 aa6.66□□□□□ -1.34
GTF3A-208ENST00000493903 GNL2Q13823 731 aaKnown RBP6.66□□□□□ -1.34
GTF3A-208ENST00000493903 NOP9Q86U38 636 aaKnown RBP6.66□□□□□ -1.34
GTF3A-208ENST00000493903 GJD3Q8N144 294 aa6.66□□□□□ -1.34
GTF3A-208ENST00000493903 FAM161BQ96MY7 647 aa6.66□□□□□ -1.34
GTF3A-208ENST00000493903 QTRT2Q9H974 415 aaKnown RBP6.66□□□□□ -1.34
GTF3A-208ENST00000493903 SOBPA7XYQ1 873 aa6.65□□□□□ -1.34
GTF3A-208ENST00000493903 CDK2AP1O14519 115 aa6.65□□□□□ -1.34
GTF3A-208ENST00000493903 SPINT1O43278 529 aa6.65□□□□□ -1.34
GTF3A-208ENST00000493903 MZF1P28698 734 aaPredicted RBP6.65□□□□□ -1.34
GTF3A-208ENST00000493903 GNA15P30679 374 aa6.65□□□□□ -1.34
GTF3A-208ENST00000493903 HIRAP54198 1017 aaPredicted RBP6.65□□□□□ -1.34
GTF3A-208ENST00000493903 DPH6Q7L8W6 267 aa6.65□□□□□ -1.34
GTF3A-208ENST00000493903 INSM2Q96T92 566 aaPredicted RBP6.65□□□□□ -1.34
GTF3A-208ENST00000493903 GMLQ99445 158 aa6.65□□□□□ -1.34
GTF3A-208ENST00000493903 PRKAG2Q9UGJ0 569 aa6.65□□□□□ -1.34
GTF3A-208ENST00000493903 PNMA6FA0A0J9YX94 578 aa6.64□□□□□ -1.35
GTF3A-208ENST00000493903 NEFLP07196 543 aa6.64□□□□□ -1.35
GTF3A-208ENST00000493903 ATP2B1P20020 1258 aa6.64□□□□□ -1.35
GTF3A-208ENST00000493903 PTGIRP43119 386 aa6.64□□□□□ -1.35
GTF3A-208ENST00000493903 NBPF15Q8N660 670 aa6.64□□□□□ -1.35
GTF3A-208ENST00000493903 XAGE2Q96GT9 111 aa6.64□□□□□ -1.35
GTF3A-208ENST00000493903 NIF3L1Q9GZT8 377 aa6.64□□□□□ -1.35
GTF3A-208ENST00000493903 CAPN10Q9HC96 672 aa6.64□□□□□ -1.35
GTF3A-208ENST00000493903 WWC3Q9ULE0 1092 aa6.64□□□□□ -1.35
GTF3A-208ENST00000493903 LRFN2Q9ULH4 789 aa6.64□□□□□ -1.35
GTF3A-208ENST00000493903 SOS2Q07890 1332 aaPredicted RBP6.64□□□□□ -1.35
GTF3A-208ENST00000493903 STAU1O95793 577 aaKnown RBP6.63□□□□□ -1.35
GTF3A-208ENST00000493903 CTSOP43234 321 aaPredicted RBP6.63□□□□□ -1.35
GTF3A-208ENST00000493903 CRELD1Q96HD1 420 aa6.63□□□□□ -1.35
GTF3A-208ENST00000493903 POLIQ9UNA4 740 aa6.63□□□□□ -1.35
GTF3A-208ENST00000493903 TTLL8A6PVC2 850 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 MAN1A2O60476 641 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 PCSK2P16519 638 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 TEAD4Q15561 434 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 RTN1Q16799 776 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 C11orf91Q3C1V1 193 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 DNAJC25Q9H1X3 360 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 ARHGEF10LQ9HCE6 1279 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 POLMQ9NP87 494 aaPredicted RBP6.62□□□□□ -1.35
GTF3A-208ENST00000493903 RAB6BQ9NRW1 208 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 RNF19AQ9NV58 838 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 DNMT3LQ9UJW3 386 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.62□□□□□ -1.35
GTF3A-208ENST00000493903 AK5Q9Y6K8 562 aa6.62□□□□□ -1.35
GTF3A-208ENST00000493903 SERTM1A2A2V5 107 aa6.61□□□□□ -1.35
GTF3A-208ENST00000493903 FIGNL2A6NMB9 653 aa6.61□□□□□ -1.35
GTF3A-208ENST00000493903 MEN1O00255 615 aa6.61□□□□□ -1.35
GTF3A-208ENST00000493903 ZBTB39O15060 712 aa6.61□□□□□ -1.35
GTF3A-208ENST00000493903 PPM1GO15355 546 aaPredicted RBP6.61□□□□□ -1.35
GTF3A-208ENST00000493903 PDGFAP04085 211 aa6.61□□□□□ -1.35
GTF3A-208ENST00000493903 RPLP1P05386 114 aaKnown RBP6.61□□□□□ -1.35
GTF3A-208ENST00000493903 TBCELQ5QJ74 424 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms