RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 ALDH16A1Q8IZ83 802 aa7.52□□□□□ -1.21
CD46-217ENST00000493796 GJA3Q9Y6H8 435 aa7.52□□□□□ -1.21
CD46-217ENST00000493796 IGF1RP08069 1367 aa7.51□□□□□ -1.21
CD46-217ENST00000493796 SUPT5HO00267 1087 aaKnown RBP7.51□□□□□ -1.21
CD46-217ENST00000493796 FOXO3O43524 673 aa7.51□□□□□ -1.21
CD46-217ENST00000493796 SAMD5Q5TGI4 173 aa7.51□□□□□ -1.21
CD46-217ENST00000493796 KLRG1Q96E93 195 aa7.51□□□□□ -1.21
CD46-217ENST00000493796 PPP1R15AO75807 674 aaPredicted RBP7.5□□□□□ -1.21
CD46-217ENST00000493796 FAM157BP0CG42 384 aa7.5□□□□□ -1.21
CD46-217ENST00000493796 FGFR3P22607 806 aa7.5□□□□□ -1.21
CD46-217ENST00000493796 LRRC69Q6ZNQ3 347 aa7.5□□□□□ -1.21
CD46-217ENST00000493796 NEUROD4Q9HD90 331 aa7.5□□□□□ -1.21
CD46-217ENST00000493796 NSFL1CQ9UNZ2 370 aaKnown RBP7.5□□□□□ -1.21
CD46-217ENST00000493796 DCDC2BA2VCK2 349 aa7.49□□□□□ -1.21
CD46-217ENST00000493796 FAM181BA6NEQ2 426 aa7.49□□□□□ -1.21
CD46-217ENST00000493796 MAPTP10636 758 aaKnown RBP7.49□□□□□ -1.21
CD46-217ENST00000493796 TNP2Q05952 138 aa7.49□□□□□ -1.21
CD46-217ENST00000493796 ZNF385CQ66K41 422 aaPredicted RBP7.49□□□□□ -1.21
CD46-217ENST00000493796 WHAMMQ8TF30 809 aa7.49□□□□□ -1.21
CD46-217ENST00000493796 NGLY1Q96IV0 654 aa7.49□□□□□ -1.21
CD46-217ENST00000493796 PRIMPOLQ96LW4 560 aa7.49□□□□□ -1.21
CD46-217ENST00000493796 HCN2Q9UL51 889 aa7.49□□□□□ -1.21
CD46-217ENST00000493796 KHNYNO15037 678 aaKnown RBP7.48□□□□□ -1.21
CD46-217ENST00000493796 EFSO43281 561 aa7.48□□□□□ -1.21
CD46-217ENST00000493796 PRMT3O60678 531 aa7.48□□□□□ -1.21
CD46-217ENST00000493796 MAP2K3P46734 347 aa7.48□□□□□ -1.21
CD46-217ENST00000493796 CTBSQ01459 385 aa7.48□□□□□ -1.21
CD46-217ENST00000493796 OCLNQ16625 522 aa7.48□□□□□ -1.21
CD46-217ENST00000493796 RTN1Q16799 776 aa7.48□□□□□ -1.21
CD46-217ENST00000493796 HSH2DQ96JZ2 352 aa7.48□□□□□ -1.21
CD46-217ENST00000493796 ANKIB1Q9P2G1 1089 aa7.48□□□□□ -1.21
CD46-217ENST00000493796 C2CD2LO14523 706 aa7.47□□□□□ -1.21
CD46-217ENST00000493796 FKBP5Q13451 457 aaPredicted RBP7.47□□□□□ -1.21
CD46-217ENST00000493796 LYPD4Q6UWN0 246 aa7.47□□□□□ -1.21
CD46-217ENST00000493796 ZNF280CQ8ND82 737 aa7.47□□□□□ -1.21
CD46-217ENST00000493796 CLP1Q92989 425 aaKnown RBP7.47□□□□□ -1.21
CD46-217ENST00000493796 VTI1AQ96AJ9 217 aa7.47□□□□□ -1.21
CD46-217ENST00000493796 SUSD3Q96L08 255 aa7.47□□□□□ -1.21
CD46-217ENST00000493796 CELA2BP08218 269 aaPredicted RBP7.46□□□□□ -1.22
CD46-217ENST00000493796 BMP4P12644 408 aa7.46□□□□□ -1.22
CD46-217ENST00000493796 LAMC2Q13753 1193 aa7.46□□□□□ -1.22
CD46-217ENST00000493796 HIF1AQ16665 826 aa7.46□□□□□ -1.22
CD46-217ENST00000493796 FAM182BQ5T319 152 aa7.46□□□□□ -1.22
CD46-217ENST00000493796 SVOPQ8N4V2 548 aa7.46□□□□□ -1.22
CD46-217ENST00000493796 ACDQ96AP0 544 aa7.46□□□□□ -1.22
CD46-217ENST00000493796 QTRT2Q9H974 415 aaKnown RBP7.46□□□□□ -1.22
CD46-217ENST00000493796 CD33P20138 364 aa7.45□□□□□ -1.22
CD46-217ENST00000493796 STRN4Q9NRL3 753 aa7.45□□□□□ -1.22
CD46-217ENST00000493796 MARK1Q9P0L2 795 aa7.45□□□□□ -1.22
CD46-217ENST00000493796 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
CD46-217ENST00000493796 SLAIN2Q9P270 581 aa7.45□□□□□ -1.22
CD46-217ENST00000493796 ARHGEF15O94989 841 aa7.44□□□□□ -1.22
CD46-217ENST00000493796 TYRO3Q06418 890 aa7.44□□□□□ -1.22
CD46-217ENST00000493796 MYO19Q96H55 970 aa7.44□□□□□ -1.22
CD46-217ENST00000493796 ARID3AQ99856 593 aa7.44□□□□□ -1.22
CD46-217ENST00000493796 OXCT2Q9BYC2 517 aaPredicted RBP7.44□□□□□ -1.22
CD46-217ENST00000493796 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.44□□□□□ -1.221e-8■■■■■ 43.5
CD46-217ENST00000493796 TMEM88BA6NKF7 163 aa7.43□□□□□ -1.22
CD46-217ENST00000493796 BCRP11274 1271 aa7.43□□□□□ -1.22
CD46-217ENST00000493796 SFSWAPQ12872 951 aaKnown RBP7.43□□□□□ -1.22
CD46-217ENST00000493796 IER5Q5VY09 327 aa7.43□□□□□ -1.22
CD46-217ENST00000493796 BTLAQ7Z6A9 289 aa7.43□□□□□ -1.22
CD46-217ENST00000493796 COL26A1Q96A83 441 aa7.43□□□□□ -1.22
CD46-217ENST00000493796 CEP63Q96MT8 703 aa7.43□□□□□ -1.22
CD46-217ENST00000493796 BRD7Q9NPI1 651 aa7.43□□□□□ -1.22
CD46-217ENST00000493796 KLK14Q9P0G3 267 aa7.43□□□□□ -1.22
CD46-217ENST00000493796 BCS1LQ9Y276 419 aa7.43□□□□□ -1.22
CD46-217ENST00000493796 TGFBR3LH3BV60 316 aa7.42□□□□□ -1.22
CD46-217ENST00000493796 ATP2B4P23634 1241 aa7.42□□□□□ -1.22
CD46-217ENST00000493796 MAP3K10Q02779 954 aa7.42□□□□□ -1.22
CD46-217ENST00000493796 DGKZQ13574 1117 aa7.42□□□□□ -1.22
CD46-217ENST00000493796 GOLGA6L1Q8N7Z2 621 aa7.42□□□□□ -1.22
CD46-217ENST00000493796 LRRC4BQ9NT99 713 aa7.42□□□□□ -1.22
CD46-217ENST00000493796 GDF2Q9UK05 429 aaPredicted RBP7.42□□□□□ -1.22
CD46-217ENST00000493796 OIP5O43482 229 aa7.41□□□□□ -1.22
CD46-217ENST00000493796 ARAFP10398 606 aa7.41□□□□□ -1.22
CD46-217ENST00000493796 KCNQ4P56696 695 aa7.41□□□□□ -1.22
CD46-217ENST00000493796 DMGDHQ9UI17 866 aaKnown RBP7.41□□□□□ -1.22
CD46-217ENST00000493796 LRFN2Q9ULH4 789 aa7.41□□□□□ -1.22
CD46-217ENST00000493796 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
CD46-217ENST00000493796 GRIN2CQ14957 1233 aa7.4□□□□□ -1.22
CD46-217ENST00000493796 C11orf91Q3C1V1 193 aa7.4□□□□□ -1.22
CD46-217ENST00000493796 COX20Q5RI15 118 aa7.4□□□□□ -1.22
CD46-217ENST00000493796 ZNF468Q5VIY5 522 aaPredicted RBP7.4□□□□□ -1.22
CD46-217ENST00000493796 CAPN12Q6ZSI9 719 aa7.4□□□□□ -1.22
CD46-217ENST00000493796 MKNK1Q9BUB5 465 aa7.4□□□□□ -1.22
CD46-217ENST00000493796 AVENQ9NQS1 362 aaPredicted RBP7.4□□□□□ -1.22
CD46-217ENST00000493796 ENAMQ9NRM1 1142 aa7.4□□□□□ -1.22
CD46-217ENST00000493796 GGA1Q9UJY5 639 aa7.4□□□□□ -1.22
CD46-217ENST00000493796 KCNH4Q9UQ05 1017 aa7.4□□□□□ -1.22
CD46-217ENST00000493796 PTCD1O75127 700 aaKnown RBP7.39□□□□□ -1.23
CD46-217ENST00000493796 C16orf46Q6P387 395 aa7.39□□□□□ -1.23
CD46-217ENST00000493796 SLCO4C1Q6ZQN7 724 aa7.39□□□□□ -1.23
CD46-217ENST00000493796 C1orf229Q6ZS94 237 aaPredicted RBP7.39□□□□□ -1.23
CD46-217ENST00000493796 SAP130Q9H0E3 1048 aa7.39□□□□□ -1.23
CD46-217ENST00000493796 KLF15Q9UIH9 416 aa7.39□□□□□ -1.23
CD46-217ENST00000493796 PRR12Q9ULL5 1215 aa7.39□□□□□ -1.23
CD46-217ENST00000493796 NEURL1BA8MQ27 555 aa7.38□□□□□ -1.23
CD46-217ENST00000493796 ADH6P28332 368 aa7.38□□□□□ -1.23
CD46-217ENST00000493796 GALNT6Q8NCL4 622 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms