RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-211ENST00000493660 CCT4P50991 539 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-211ENST00000493660 G2E3Q7L622 706 aa8.98□□□□□ -0.97
SMARCE1-211ENST00000493660 QTRT2Q9H974 415 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-211ENST00000493660 ATG3Q9NT62 314 aa8.98□□□□□ -0.97
SMARCE1-211ENST00000493660 LY75O60449 1722 aa8.98□□□□□ -0.97
SMARCE1-211ENST00000493660 TULP1O00294 542 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-211ENST00000493660 TMEM51Q9NW97 253 aa8.98□□□□□ -0.97
SMARCE1-211ENST00000493660 PRIM1P49642 420 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 FKBP5Q13451 457 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 NECTIN2Q92692 538 aa8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 SMARCC1Q92922 1105 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 PRAMEF22A3QJZ6 481 aa8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 DDX58O95786 925 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 PDIA6Q15084 440 aa8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 MTERF4Q7Z6M4 381 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 CNKSR2Q8WXI2 1034 aa8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 ZBTB40Q9NUA8 1239 aa8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 ASAP1Q9ULH1 1129 aa8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 AFDNP55196 1824 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-211ENST00000493660 A0A0G2JS52 829 aa8.96□□□□□ -0.97
SMARCE1-211ENST00000493660 DMTNQ08495 405 aa8.96□□□□□ -0.97
SMARCE1-211ENST00000493660 SECISBP2LQ93073 1101 aaKnown RBP8.96□□□□□ -0.97
SMARCE1-211ENST00000493660 USP16Q9Y5T5 823 aa8.96□□□□□ -0.97
SMARCE1-211ENST00000493660 ZBTB7BO15156 539 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-211ENST00000493660 TERF1P54274 439 aa8.96□□□□□ -0.98
SMARCE1-211ENST00000493660 RBM6P78332 1123 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-211ENST00000493660 CENPQQ7L2Z9 268 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-211ENST00000493660 SEPT12Q8IYM1 358 aa8.96□□□□□ -0.98
SMARCE1-211ENST00000493660 PHAXQ9H814 394 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-211ENST00000493660 ANKRD36CQ5JPF3 1778 aa8.95□□□□□ -0.98
SMARCE1-211ENST00000493660 KDM2BQ8NHM5 1336 aa8.95□□□□□ -0.98
SMARCE1-211ENST00000493660 HSP90B1P14625 803 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-211ENST00000493660 LRP10Q7Z4F1 713 aa8.95□□□□□ -0.98
SMARCE1-211ENST00000493660 SYTL4Q96C24 671 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-211ENST00000493660 ZNF830Q96NB3 372 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-211ENST00000493660 ADCY9O60503 1353 aa8.95□□□□□ -0.98
SMARCE1-211ENST00000493660 TAF1LQ8IZX4 1826 aa8.95□□□□□ -0.98
SMARCE1-211ENST00000493660 PTCD1O75127 700 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-211ENST00000493660 STARD3NLO95772 234 aa8.94□□□□□ -0.98
SMARCE1-211ENST00000493660 PROSER3Q2NL68 480 aa8.94□□□□□ -0.98
SMARCE1-211ENST00000493660 KSR2Q6VAB6 950 aa8.94□□□□□ -0.98
SMARCE1-211ENST00000493660 DNAAF4Q8WXU2 420 aa8.94□□□□□ -0.98
SMARCE1-211ENST00000493660 BACH2Q9BYV9 841 aa8.94□□□□□ -0.98
SMARCE1-211ENST00000493660 PALLDQ8WX93 1383 aa8.94□□□□□ -0.98
SMARCE1-211ENST00000493660 PDE4AP27815 886 aa8.94□□□□□ -0.98
SMARCE1-211ENST00000493660 TAF3Q5VWG9 929 aa8.94□□□□□ -0.98
SMARCE1-211ENST00000493660 ACSBG1Q96GR2 724 aa8.94□□□□□ -0.98
SMARCE1-211ENST00000493660 F6X3S4 739 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 ALDH1L1O75891 902 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 PPP4R3BQ5MIZ7 849 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 RBM42Q9BTD8 480 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 PI4KAP2A4QPH2 592 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 KIF20AO95235 890 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 ANXA1P04083 346 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 GNAI3P08754 354 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 HDAC1Q13547 482 aaPredicted RBP8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 SLC4A10Q6U841 1118 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 DNAJC10Q8IXB1 793 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 PI4KAP1Q8N8J0 262 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 XAGE3Q8WTP9 111 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 ANP32BQ92688 251 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 SRCIN1Q9C0H9 1055 aa8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 RWDD1Q9H446 243 aaPredicted RBP8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 RNF216Q9NWF9 866 aaPredicted RBP8.93□□□□□ -0.98
SMARCE1-211ENST00000493660 RGPD3A6NKT7 1758 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 BCORQ6W2J9 1755 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 RGPD4Q7Z3J3 1758 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 NBPF26B4DH59 902 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 CYP19A1P11511 503 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 BEND3Q5T5X7 828 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 NBPF14Q5TI25 921 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 NBPF10Q6P3W6 841 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 NBPF15Q8N660 670 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 SLC4A9Q96Q91 983 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 ZHX1Q9UKY1 873 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 PCDHB15Q9Y5E8 787 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 LOC102724428A0A0B4J2F2 783 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 MYL6BP14649 208 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 SIK1P57059 783 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 FAM196AQ6ZSG2 479 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 COPS6Q7L5N1 327 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 KRT27Q7Z3Y8 459 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 LINS1Q8NG48 757 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 PLBD2Q8NHP8 589 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 MAP3K2Q9Y2U5 619 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 NUP98P52948 1817 aa8.92□□□□□ -0.98
SMARCE1-211ENST00000493660 MYH14Q7Z406 1995 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-211ENST00000493660 KCNQ2O43526 872 aa8.91□□□□□ -0.98
SMARCE1-211ENST00000493660 A1BGP04217 495 aa8.91□□□□□ -0.98
SMARCE1-211ENST00000493660 ANKRD13DQ6ZTN6 518 aa8.91□□□□□ -0.98
SMARCE1-211ENST00000493660 RIC3Q7Z5B4 369 aa8.91□□□□□ -0.98
SMARCE1-211ENST00000493660 METTL22Q9BUU2 404 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-211ENST00000493660 HDAC5Q9UQL6 1122 aa8.91□□□□□ -0.98
SMARCE1-211ENST00000493660 NEXNQ0ZGT2 675 aa8.91□□□□□ -0.98
SMARCE1-211ENST00000493660 RPAP2Q8IXW5 612 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-211ENST00000493660 FRAT2O75474 233 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-211ENST00000493660 GNAI2P04899 355 aa8.9□□□□□ -0.98
SMARCE1-211ENST00000493660 HMGB2P26583 209 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-211ENST00000493660 RXRBP28702 533 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms