RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 STYK1Q6J9G0 422 aa17.96■□□□□ 0.47
TRIM50-204ENST00000493498 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
TRIM50-204ENST00000493498 DZIP3Q86Y13 1208 aaKnown RBP17.96■□□□□ 0.47
TRIM50-204ENST00000493498 LTBP3Q9NS15 1303 aa17.96■□□□□ 0.46
TRIM50-204ENST00000493498 COL11A2P13942 1736 aaPredicted RBP17.95■□□□□ 0.46
TRIM50-204ENST00000493498 ARFGEF2Q9Y6D5 1785 aa17.95■□□□□ 0.46
TRIM50-204ENST00000493498 HTATSF1O43719 755 aaKnown RBP17.95■□□□□ 0.46
TRIM50-204ENST00000493498 A1BGP04217 495 aa17.95■□□□□ 0.46
TRIM50-204ENST00000493498 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
TRIM50-204ENST00000493498 JMYQ8N9B5 988 aa17.95■□□□□ 0.46
TRIM50-204ENST00000493498 PHACTR3Q96KR7 559 aa17.95■□□□□ 0.46
TRIM50-204ENST00000493498 U2AF1L5P0DN76 240 aaPredicted RBP17.94■□□□□ 0.46
TRIM50-204ENST00000493498 U2AF1Q01081 240 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRIM50-204ENST00000493498 TAOK3Q9H2K8 898 aa17.94■□□□□ 0.46
TRIM50-204ENST00000493498 C21orf2O43822 256 aa17.93■□□□□ 0.46
TRIM50-204ENST00000493498 ERFEQ4G0M1 354 aa17.93■□□□□ 0.46
TRIM50-204ENST00000493498 MASTLQ96GX5 879 aa17.93■□□□□ 0.46
TRIM50-204ENST00000493498 NEFMP07197 916 aa17.92■□□□□ 0.46
TRIM50-204ENST00000493498 SRGNP10124 158 aa17.92■□□□□ 0.46
TRIM50-204ENST00000493498 PRELPP51888 382 aa17.92■□□□□ 0.46
TRIM50-204ENST00000493498 CACNA1SQ13698 1873 aa17.92■□□□□ 0.46
TRIM50-204ENST00000493498 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
TRIM50-204ENST00000493498 NBPF5PQ86XG9 351 aaPredicted RBP17.91■□□□□ 0.46
TRIM50-204ENST00000493498 USP16Q9Y5T5 823 aa17.91■□□□□ 0.46
TRIM50-204ENST00000493498 KCNQ3O43525 872 aa17.9■□□□□ 0.46
TRIM50-204ENST00000493498 PRPF40BQ6NWY9 871 aaKnown RBP17.9■□□□□ 0.46
TRIM50-204ENST00000493498 SLX4Q8IY92 1834 aa17.9■□□□□ 0.46
TRIM50-204ENST00000493498 HTRA3P83110 453 aa17.89■□□□□ 0.45
TRIM50-204ENST00000493498 TPTE2Q6XPS3 522 aa17.89■□□□□ 0.45
TRIM50-204ENST00000493498 NPR1P16066 1061 aa17.88■□□□□ 0.45
TRIM50-204ENST00000493498 MCM10Q7L590 875 aa17.88■□□□□ 0.45
TRIM50-204ENST00000493498 CCDC24Q8N4L8 307 aa17.88■□□□□ 0.45
TRIM50-204ENST00000493498 PNISRQ8TF01 805 aaKnown RBP17.88■□□□□ 0.45
TRIM50-204ENST00000493498 ZNF219Q9P2Y4 722 aaPredicted RBP17.88■□□□□ 0.45
TRIM50-204ENST00000493498 LAMB4A4D0S4 1761 aa17.88■□□□□ 0.45
TRIM50-204ENST00000493498 TAF7Q15545 349 aaPredicted RBP17.87■□□□□ 0.45
TRIM50-204ENST00000493498 CCDC93Q567U6 631 aa17.87■□□□□ 0.45
TRIM50-204ENST00000493498 IQCA1LA6NCM1 817 aa17.86■□□□□ 0.45
TRIM50-204ENST00000493498 NIP7Q9Y221 180 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRIM50-204ENST00000493498 SCN4AP35499 1836 aa17.86■□□□□ 0.45
TRIM50-204ENST00000493498 KLRG2A4D1S0 409 aaPredicted RBP17.85■□□□□ 0.45
TRIM50-204ENST00000493498 POTECB2RU33 542 aa17.85■□□□□ 0.45
TRIM50-204ENST00000493498 MRS2Q9HD23 443 aa17.85■□□□□ 0.45
TRIM50-204ENST00000493498 ALDH1B1P30837 517 aa17.84■□□□□ 0.45
TRIM50-204ENST00000493498 CHADLQ6NUI6 762 aa17.84■□□□□ 0.45
TRIM50-204ENST00000493498 RTKN2Q8IZC4 609 aa17.84■□□□□ 0.45
TRIM50-204ENST00000493498 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
TRIM50-204ENST00000493498 DLG5Q8TDM6 1919 aa17.83■□□□□ 0.44
TRIM50-204ENST00000493498 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.44
TRIM50-204ENST00000493498 NBPF26B4DH59 902 aa17.83■□□□□ 0.44
TRIM50-204ENST00000493498 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.44
TRIM50-204ENST00000493498 PIP4K2AP48426 406 aaPredicted RBP17.83■□□□□ 0.44
TRIM50-204ENST00000493498 NBPF10Q6P3W6 841 aaKnown RBP17.83■□□□□ 0.44
TRIM50-204ENST00000493498 NBPF15Q8N660 670 aa17.83■□□□□ 0.44
TRIM50-204ENST00000493498 NYXQ9GZU5 481 aa17.83■□□□□ 0.44
TRIM50-204ENST00000493498 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRIM50-204ENST00000493498 DCTN1Q14203 1278 aa17.82■□□□□ 0.44
TRIM50-204ENST00000493498 C7orf43Q8WVR3 580 aa17.82■□□□□ 0.44
TRIM50-204ENST00000493498 L3MBTL3Q96JM7 780 aaPredicted RBP17.82■□□□□ 0.44
TRIM50-204ENST00000493498 KDM3BQ7LBC6 1761 aa17.81■□□□□ 0.44
TRIM50-204ENST00000493498 ERVV-1B6SEH8 477 aa17.81■□□□□ 0.44
TRIM50-204ENST00000493498 DDNO94850 711 aaPredicted RBP17.81■□□□□ 0.44
TRIM50-204ENST00000493498 CCDC184Q52MB2 194 aa17.81■□□□□ 0.44
TRIM50-204ENST00000493498 CREBZFQ9NS37 354 aa17.81■□□□□ 0.44
TRIM50-204ENST00000493498 NUP98P52948 1817 aa17.8■□□□□ 0.44
TRIM50-204ENST00000493498 KIF6Q6ZMV9 814 aa17.8■□□□□ 0.44
TRIM50-204ENST00000493498 LDHDQ86WU2 507 aa17.8■□□□□ 0.44
TRIM50-204ENST00000493498 GRIPAP1Q4V328 841 aa17.79■□□□□ 0.44
TRIM50-204ENST00000493498 CC2D2BQ6DHV5 1058 aa17.79■□□□□ 0.44
TRIM50-204ENST00000493498 IBTKQ9P2D0 1353 aaPredicted RBP17.79■□□□□ 0.44
TRIM50-204ENST00000493498 ERBB4Q15303 1308 aa17.77■□□□□ 0.44
TRIM50-204ENST00000493498 MAP3K15Q6ZN16 1313 aa17.77■□□□□ 0.44
TRIM50-204ENST00000493498 MAPK8IP3Q9UPT6 1336 aa17.77■□□□□ 0.44
TRIM50-204ENST00000493498 HSPA1AP0DMV8 641 aaKnown RBP17.77■□□□□ 0.44
TRIM50-204ENST00000493498 HSPA1BP0DMV9 641 aaKnown RBP17.77■□□□□ 0.44
TRIM50-204ENST00000493498 NFE2L2Q16236 605 aa17.77■□□□□ 0.44
TRIM50-204ENST00000493498 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.44
TRIM50-204ENST00000493498 TAF1DQ9H5J8 278 aaPredicted RBP17.77■□□□□ 0.44
TRIM50-204ENST00000493498 RIC1Q4ADV7 1423 aa17.77■□□□□ 0.44
TRIM50-204ENST00000493498 FAM177BA6PVY3 158 aa17.76■□□□□ 0.43
TRIM50-204ENST00000493498 IARSP41252 1262 aaKnown RBP17.76■□□□□ 0.43
TRIM50-204ENST00000493498 HLFQ16534 295 aa17.76■□□□□ 0.43
TRIM50-204ENST00000493498 CRY2Q49AN0 593 aa17.76■□□□□ 0.43
TRIM50-204ENST00000493498 TNS4Q8IZW8 715 aa17.76■□□□□ 0.43
TRIM50-204ENST00000493498 PSMD1Q99460 953 aa17.76■□□□□ 0.43
TRIM50-204ENST00000493498 ZNF277Q9NRM2 450 aaPredicted RBP17.76■□□□□ 0.43
TRIM50-204ENST00000493498 HACL1Q9UJ83 578 aa17.76■□□□□ 0.43
TRIM50-204ENST00000493498 EIF4A1P60842 406 aaKnown RBP17.75■□□□□ 0.43
TRIM50-204ENST00000493498 PNMA8AQ86V59 439 aaPredicted RBP17.75■□□□□ 0.43
TRIM50-204ENST00000493498 JDP2Q8WYK2 163 aa17.75■□□□□ 0.43
TRIM50-204ENST00000493498 RPGRQ92834 1020 aaKnown RBP17.75■□□□□ 0.43
TRIM50-204ENST00000493498 MIS18AQ9NYP9 233 aa17.75■□□□□ 0.43
TRIM50-204ENST00000493498 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
TRIM50-204ENST00000493498 PCNTO95613 3336 aa17.74■□□□□ 0.43
TRIM50-204ENST00000493498 PASKQ96RG2 1323 aa17.73■□□□□ 0.43
TRIM50-204ENST00000493498 FZD9O00144 591 aa17.73■□□□□ 0.43
TRIM50-204ENST00000493498 GPC2Q8N158 579 aa17.73■□□□□ 0.43
TRIM50-204ENST00000493498 SYNE4Q8N205 404 aa17.73■□□□□ 0.43
TRIM50-204ENST00000493498 NGEFQ8N5V2 710 aa17.73■□□□□ 0.43
TRIM50-204ENST00000493498 RRP7AQ9Y3A4 280 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms