RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 SMC3Q9UQE7 1217 aa7.99□□□□□ -1.13
EWSR1-220ENST00000493426 FARP1Q9Y4F1 1045 aaPredicted RBP7.99□□□□□ -1.13
EWSR1-220ENST00000493426 FHOD1Q9Y613 1164 aa7.99□□□□□ -1.13
EWSR1-220ENST00000493426 PPLO60437 1756 aa7.99□□□□□ -1.13
EWSR1-220ENST00000493426 TTC21BQ7Z4L5 1316 aa7.99□□□□□ -1.13
EWSR1-220ENST00000493426 TTC21AQ8NDW8 1320 aa7.99□□□□□ -1.13
EWSR1-220ENST00000493426 NPATQ14207 1427 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 PSDA5PKW4 1024 aaPredicted RBP7.98□□□□□ -1.13
EWSR1-220ENST00000493426 PDCP20941 246 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 GSDMDP57764 484 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 TPM4P67936 248 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 IRX3P78415 501 aaPredicted RBP7.98□□□□□ -1.13
EWSR1-220ENST00000493426 ATP8B2P98198 1209 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 VPS53Q5VIR6 699 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 FOXD4L5Q5VV16 416 aaPredicted RBP7.98□□□□□ -1.13
EWSR1-220ENST00000493426 TEX2Q8IWB9 1127 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 MPNDQ8N594 471 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 SPC24Q8NBT2 197 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 FOXD4L4Q8WXT5 416 aaPredicted RBP7.98□□□□□ -1.13
EWSR1-220ENST00000493426 SCAND2PQ9GZW5 306 aaPredicted RBP7.98□□□□□ -1.13
EWSR1-220ENST00000493426 OSBPL5Q9H0X9 879 aaPredicted RBP7.98□□□□□ -1.13
EWSR1-220ENST00000493426 GGNBP2Q9H3C7 697 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 CLSTN2Q9H4D0 955 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 ZNF446Q9NWS9 450 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 IMPACTQ9P2X3 320 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 ERBB3P21860 1342 aa7.98□□□□□ -1.13
EWSR1-220ENST00000493426 SOS1Q07889 1333 aaPredicted RBP7.98□□□□□ -1.13
EWSR1-220ENST00000493426 PIK3C2BO00750 1634 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 TUBGCP6Q96RT7 1819 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 CTAGE5O15320 804 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 SGSM2O43147 1006 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 RAB11FIP3O75154 756 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 RPS6KA5O75582 802 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 NOP2P46087 812 aaKnown RBP7.97□□□□□ -1.13
EWSR1-220ENST00000493426 PLA2G4AP47712 749 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 KRT85P78386 507 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 LRMPQ12912 555 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 IQCB1Q15051 598 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 HDGFL2Q7Z4V5 671 aaPredicted RBP7.97□□□□□ -1.13
EWSR1-220ENST00000493426 FILIP1Q7Z7B0 1213 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 CCAR2Q8N163 923 aaKnown RBP7.97□□□□□ -1.13
EWSR1-220ENST00000493426 PHACTR3Q96KR7 559 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 C16orf45Q96MC5 204 aaPredicted RBP7.97□□□□□ -1.13
EWSR1-220ENST00000493426 TRIM5Q9C035 493 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 LRRCC1Q9C099 1032 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 BRMS1Q9HCU9 246 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 SNX14Q9Y5W7 946 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 CLTCQ00610 1675 aaKnown RBP7.97□□□□□ -1.13
EWSR1-220ENST00000493426 NEXMIFQ5QGS0 1516 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 NPHP3Q7Z494 1330 aa7.97□□□□□ -1.13
EWSR1-220ENST00000493426 RIMS2Q9UQ26 1411 aa7.96□□□□□ -1.13
EWSR1-220ENST00000493426 MROH2AA6NES4 1674 aa7.96□□□□□ -1.13
EWSR1-220ENST00000493426 ARHGEF28Q8N1W1 1705 aaKnown RBP7.96□□□□□ -1.14
EWSR1-220ENST00000493426 RAPGEF3O95398 923 aa7.96□□□□□ -1.14
EWSR1-220ENST00000493426 GNAI2P04899 355 aa7.96□□□□□ -1.14
EWSR1-220ENST00000493426 PNMA6AP0CW24 399 aaPredicted RBP7.96□□□□□ -1.14
EWSR1-220ENST00000493426 GPS2Q13227 327 aa7.96□□□□□ -1.14
EWSR1-220ENST00000493426 NAA30Q147X3 362 aaPredicted RBP7.96□□□□□ -1.14
EWSR1-220ENST00000493426 RUFY3Q7L099 469 aa7.96□□□□□ -1.14
EWSR1-220ENST00000493426 TTC6Q86TZ1 520 aa7.96□□□□□ -1.14
EWSR1-220ENST00000493426 RGS22Q8NE09 1264 aa7.96□□□□□ -1.14
EWSR1-220ENST00000493426 LSG1Q9H089 658 aaKnown RBP7.96□□□□□ -1.14
EWSR1-220ENST00000493426 ZSWIM6Q9HCJ5 1215 aa7.96□□□□□ -1.14
EWSR1-220ENST00000493426 ANO2Q9NQ90 1003 aa7.96□□□□□ -1.14
EWSR1-220ENST00000493426 HYPKQ9NX55 129 aa7.96□□□□□ -1.14
EWSR1-220ENST00000493426 USP42Q9H9J4 1324 aaKnown RBP7.96□□□□□ -1.14
EWSR1-220ENST00000493426 VGLL3A8MV65 326 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 CCP110O43303 1012 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 FIBPO43427 364 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 GNAI3P08754 354 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 ZNF165P49910 485 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 AK2P54819 239 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 CCZ1BP86790 482 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 CCZ1P86791 482 aaPredicted RBP7.95□□□□□ -1.14
EWSR1-220ENST00000493426 DNM1Q05193 864 aaKnown RBP7.95□□□□□ -1.14
EWSR1-220ENST00000493426 RAD51AP2Q09MP3 1159 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 EXOC4Q96A65 974 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 MEIS3Q99687 375 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 RASSF4Q9H2L5 321 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 TNMDQ9H2S6 317 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 CABP2Q9NPB3 220 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 SNRKQ9NRH2 765 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 ATG3Q9NT62 314 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 ARGLU1Q9NWB6 273 aaPredicted RBP7.95□□□□□ -1.14
EWSR1-220ENST00000493426 CWC15Q9P013 229 aaKnown RBP7.95□□□□□ -1.14
EWSR1-220ENST00000493426 CLIP2Q9UDT6 1046 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 NRBP1Q9UHY1 535 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 UGGT1Q9NYU2 1555 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 CAMSAP1Q5T5Y3 1602 aa7.95□□□□□ -1.14
EWSR1-220ENST00000493426 YTHDC2Q9H6S0 1430 aaKnown RBP7.95□□□□□ -1.14
EWSR1-220ENST00000493426 ATP7BP35670 1465 aa7.94□□□□□ -1.14
EWSR1-220ENST00000493426 AGLP35573 1532 aa7.94□□□□□ -1.14
EWSR1-220ENST00000493426 DIP2CQ9Y2E4 1556 aa7.94□□□□□ -1.14
EWSR1-220ENST00000493426 TRIM6-TRIM34B2RNG4 842 aa7.94□□□□□ -1.14
EWSR1-220ENST00000493426 SKILP12757 684 aa7.94□□□□□ -1.14
EWSR1-220ENST00000493426 LIG1P18858 919 aa7.94□□□□□ -1.14
EWSR1-220ENST00000493426 CLCN6P51797 869 aa7.94□□□□□ -1.14
EWSR1-220ENST00000493426 ELF2Q15723 593 aa7.94□□□□□ -1.14
EWSR1-220ENST00000493426 CCDC144BQ3MJ40 725 aa7.94□□□□□ -1.14
EWSR1-220ENST00000493426 ANO6Q4KMQ2 910 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms