RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 NUP62CLQ9H1M0 184 aa17.61■□□□□ 0.41
SMTN-219ENST00000493335 CEBPZQ03701 1054 aaKnown RBP17.61■□□□□ 0.41
SMTN-219ENST00000493335 FBXW7Q969H0 707 aa17.61■□□□□ 0.41
SMTN-219ENST00000493335 HYPKQ9NX55 129 aa17.61■□□□□ 0.41
SMTN-219ENST00000493335 DACT1Q9NYF0 836 aa17.61■□□□□ 0.41
SMTN-219ENST00000493335 MAP3K11Q16584 847 aa17.61■□□□□ 0.41
SMTN-219ENST00000493335 ME3Q16798 604 aa17.61■□□□□ 0.41
SMTN-219ENST00000493335 CDC37L1Q7L3B6 337 aa17.61■□□□□ 0.41
SMTN-219ENST00000493335 TMEM87AQ8NBN3 555 aa17.61■□□□□ 0.41
SMTN-219ENST00000493335 TNMDQ9H2S6 317 aa17.61■□□□□ 0.41
SMTN-219ENST00000493335 PA2G4Q9UQ80 394 aaKnown RBP17.61■□□□□ 0.41
SMTN-219ENST00000493335 GNAT3A8MTJ3 354 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 RAB11FIP3O75154 756 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 NAA30Q147X3 362 aaPredicted RBP17.6■□□□□ 0.41
SMTN-219ENST00000493335 TTC6Q86TZ1 520 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 BICD2Q8TD16 824 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 SSH2Q76I76 1423 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 PI4KAP2A4QPH2 592 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 ZKSCAN1P17029 563 aaPredicted RBP17.6■□□□□ 0.41
SMTN-219ENST00000493335 KRT85P78386 507 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 ANO6Q4KMQ2 910 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 TAF7LQ5H9L4 462 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 PI4KAP1Q8N8J0 262 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 SPTLC3Q9NUV7 552 aa17.6■□□□□ 0.41
SMTN-219ENST00000493335 TMEM131LA2VDJ0 1609 aa17.59■□□□□ 0.41
SMTN-219ENST00000493335 TYRO3Q06418 890 aa17.59■□□□□ 0.41
SMTN-219ENST00000493335 COL9A3Q14050 684 aaPredicted RBP17.59■□□□□ 0.41
SMTN-219ENST00000493335 IFIT2P09913 472 aaKnown RBP17.59■□□□□ 0.41
SMTN-219ENST00000493335 FAM69CQ0P6D2 419 aa17.59■□□□□ 0.41
SMTN-219ENST00000493335 CLASRPQ8N2M8 674 aaKnown RBP17.59■□□□□ 0.41
SMTN-219ENST00000493335 SSH3Q8TE77 659 aa17.59■□□□□ 0.41
SMTN-219ENST00000493335 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
SMTN-219ENST00000493335 NLRP6P59044 892 aa17.58■□□□□ 0.41
SMTN-219ENST00000493335 PPFIA3O75145 1194 aa17.58■□□□□ 0.4
SMTN-219ENST00000493335 KIF20AO95235 890 aa17.58■□□□□ 0.4
SMTN-219ENST00000493335 RUFY2Q8WXA3 655 aa17.58■□□□□ 0.4
SMTN-219ENST00000493335 IL17REQ8NFR9 667 aa17.58■□□□□ 0.4
SMTN-219ENST00000493335 FAM200AQ8TCP9 573 aa17.58■□□□□ 0.4
SMTN-219ENST00000493335 FUCA2Q9BTY2 467 aa17.58■□□□□ 0.4
SMTN-219ENST00000493335 GTPBP4Q9BZE4 634 aaKnown RBP17.57■□□□□ 0.4
SMTN-219ENST00000493335 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.57■□□□□ 0.4
SMTN-219ENST00000493335 V9GYY5 206 aaPredicted RBP17.57■□□□□ 0.4
SMTN-219ENST00000493335 TPD52L1Q16890 204 aaPredicted RBP17.57■□□□□ 0.4
SMTN-219ENST00000493335 SPATA32Q96LK8 384 aa17.57■□□□□ 0.4
SMTN-219ENST00000493335 FAM227BQ96M60 508 aa17.57■□□□□ 0.4
SMTN-219ENST00000493335 C9orf78Q9NZ63 289 aaPredicted RBP17.57■□□□□ 0.4
SMTN-219ENST00000493335 CHPF2Q9P2E5 772 aa17.57■□□□□ 0.4
SMTN-219ENST00000493335 TPCN1Q9ULQ1 816 aa17.57■□□□□ 0.4
SMTN-219ENST00000493335 NPHP1O15259 732 aa17.56■□□□□ 0.4
SMTN-219ENST00000493335 TNNT1P13805 278 aa17.56■□□□□ 0.4
SMTN-219ENST00000493335 GTF2F1P35269 517 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMTN-219ENST00000493335 DDX11Q96FC9 970 aa17.56■□□□□ 0.4
SMTN-219ENST00000493335 SIL1Q9H173 461 aa17.56■□□□□ 0.4
SMTN-219ENST00000493335 DNAJC25Q9H1X3 360 aa17.56■□□□□ 0.4
SMTN-219ENST00000493335 CLTCQ00610 1675 aaKnown RBP17.56■□□□□ 0.4
SMTN-219ENST00000493335 DIP2CQ9Y2E4 1556 aa17.56■□□□□ 0.4
SMTN-219ENST00000493335 GLRX3O76003 335 aaKnown RBP17.56■□□□□ 0.4
SMTN-219ENST00000493335 ZNF771Q7L3S4 317 aaPredicted RBP17.56■□□□□ 0.4
SMTN-219ENST00000493335 AACSQ86V21 672 aa17.56■□□□□ 0.4
SMTN-219ENST00000493335 CCDC8Q9H0W5 538 aaPredicted RBP17.55■□□□□ 0.4
SMTN-219ENST00000493335 CBX8Q9HC52 389 aa17.55■□□□□ 0.4
SMTN-219ENST00000493335 CCDC9Q9Y3X0 531 aaKnown RBP17.55■□□□□ 0.4
SMTN-219ENST00000493335 RBM8AQ9Y5S9 174 aaKnown RBP17.55■□□□□ 0.4
SMTN-219ENST00000493335 MRVI1Q9Y6F6 885 aa17.55■□□□□ 0.4
SMTN-219ENST00000493335 A0A087WWV3 80 aa17.54■□□□□ 0.4
SMTN-219ENST00000493335 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
SMTN-219ENST00000493335 VPS53Q5VIR6 699 aa17.54■□□□□ 0.4
SMTN-219ENST00000493335 BOLA2Q9H3K6 86 aa17.54■□□□□ 0.4
SMTN-219ENST00000493335 VGLL3A8MV65 326 aa17.53■□□□□ 0.4
SMTN-219ENST00000493335 ZNF165P49910 485 aa17.53■□□□□ 0.4
SMTN-219ENST00000493335 ST3GAL1Q11201 340 aa17.53■□□□□ 0.4
SMTN-219ENST00000493335 LARP1Q6PKG0 1096 aaKnown RBP17.53■□□□□ 0.4
SMTN-219ENST00000493335 CLIP2Q9UDT6 1046 aa17.53■□□□□ 0.4
SMTN-219ENST00000493335 TPM3P06753 285 aa17.53■□□□□ 0.4
SMTN-219ENST00000493335 DNAAF4Q8WXU2 420 aa17.53■□□□□ 0.4
SMTN-219ENST00000493335 SH2B1Q9NRF2 756 aaPredicted RBP17.53■□□□□ 0.4
SMTN-219ENST00000493335 KCNQ3O43525 872 aa17.52■□□□□ 0.4
SMTN-219ENST00000493335 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
SMTN-219ENST00000493335 CREB3L3Q68CJ9 461 aa17.52■□□□□ 0.4
SMTN-219ENST00000493335 FILIP1Q7Z7B0 1213 aa17.52■□□□□ 0.4
SMTN-219ENST00000493335 ZSCAN31Q96LW9 406 aaPredicted RBP17.52■□□□□ 0.4
SMTN-219ENST00000493335 ECHDC1Q9NTX5 307 aa17.52■□□□□ 0.4
SMTN-219ENST00000493335 AOX1Q06278 1338 aa17.52■□□□□ 0.4
SMTN-219ENST00000493335 NR1I2O75469 434 aa17.52■□□□□ 0.4
SMTN-219ENST00000493335 BLOC1S2Q6QNY1 142 aa17.52■□□□□ 0.4
SMTN-219ENST00000493335 GPATCH3Q96I76 525 aa17.52■□□□□ 0.4
SMTN-219ENST00000493335 FSD1Q9BTV5 496 aa17.52■□□□□ 0.4
SMTN-219ENST00000493335 TRMT1Q9NXH9 659 aaKnown RBP17.52■□□□□ 0.4
SMTN-219ENST00000493335 TAF6LQ9Y6J9 622 aa17.52■□□□□ 0.4
SMTN-219ENST00000493335 AIMP1Q12904 312 aaKnown RBP17.51■□□□□ 0.39
SMTN-219ENST00000493335 CCDC112Q8NEF3 446 aa17.51■□□□□ 0.39
SMTN-219ENST00000493335 A2ML1A8K2U0 1454 aa17.51■□□□□ 0.39
SMTN-219ENST00000493335 ROBO2Q9HCK4 1378 aa17.51■□□□□ 0.39
SMTN-219ENST00000493335 GOLGA6L19H0YKK7 550 aa17.51■□□□□ 0.39
SMTN-219ENST00000493335 H3BQV1 296 aa17.51■□□□□ 0.39
SMTN-219ENST00000493335 NMIQ13287 307 aaPredicted RBP17.51■□□□□ 0.39
SMTN-219ENST00000493335 ARID5BQ14865 1188 aa17.51■□□□□ 0.39
SMTN-219ENST00000493335 IFFO2Q5TF58 517 aa17.51■□□□□ 0.39
SMTN-219ENST00000493335 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
SMTN-219ENST00000493335 PREX1Q8TCU6 1659 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms