RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 NOD1Q9Y239 953 aa11.62□□□□□ -0.55
COL12A1-209ENST00000493109 BACH1O14867 736 aa11.61□□□□□ -0.55
COL12A1-209ENST00000493109 FOXD4L6Q3SYB3 417 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-209ENST00000493109 FOXD4L3Q6VB84 417 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-209ENST00000493109 SLC9A9Q8IVB4 645 aa11.61□□□□□ -0.55
COL12A1-209ENST00000493109 ADARB2-AS1A8MUL3 147 aa11.6□□□□□ -0.55
COL12A1-209ENST00000493109 FAM229AH3BQW9 127 aa11.6□□□□□ -0.55
COL12A1-209ENST00000493109 SIN3BO75182 1162 aa11.6□□□□□ -0.55
COL12A1-209ENST00000493109 C8orf86Q6ZUL3 223 aa11.6□□□□□ -0.55
COL12A1-209ENST00000493109 TNS4Q8IZW8 715 aa11.6□□□□□ -0.55
COL12A1-209ENST00000493109 NKAPLQ5M9Q1 402 aa11.59□□□□□ -0.55
COL12A1-209ENST00000493109 DEPDC4Q8N2C3 294 aa11.59□□□□□ -0.55
COL12A1-209ENST00000493109 KIAA1024Q9UPX6 916 aa11.59□□□□□ -0.55
COL12A1-209ENST00000493109 ALBP02768 609 aa11.58□□□□□ -0.56
COL12A1-209ENST00000493109 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
COL12A1-209ENST00000493109 TNFRSF25Q93038 417 aa11.58□□□□□ -0.56
COL12A1-209ENST00000493109 TPSG1Q9NRR2 321 aa11.58□□□□□ -0.56
COL12A1-209ENST00000493109 M0R082 166 aa11.57□□□□□ -0.56
COL12A1-209ENST00000493109 PSME1Q06323 249 aa11.57□□□□□ -0.56
COL12A1-209ENST00000493109 NFATC2IPQ8NCF5 419 aa11.57□□□□□ -0.56
COL12A1-209ENST00000493109 ZNF417Q8TAU3 575 aa11.57□□□□□ -0.56
COL12A1-209ENST00000493109 ZNF587Q96SQ5 575 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-209ENST00000493109 USP17L5A8MUK1 530 aa11.56□□□□□ -0.56
COL12A1-209ENST00000493109 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-209ENST00000493109 RAB44Q7Z6P3 723 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-209ENST00000493109 ZBTB7BO15156 539 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-209ENST00000493109 LZTS3O60299 673 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-209ENST00000493109 ALAS2P22557 587 aa11.55□□□□□ -0.56
COL12A1-209ENST00000493109 ZMYM1Q5SVZ6 1142 aa11.55□□□□□ -0.56
COL12A1-209ENST00000493109 MICALL1Q8N3F8 863 aa11.55□□□□□ -0.56
COL12A1-209ENST00000493109 PSMG3-AS1Q96PY0 264 aa11.55□□□□□ -0.56
COL12A1-209ENST00000493109 KRTAP9-2Q9BYQ4 174 aa11.55□□□□□ -0.56
COL12A1-209ENST00000493109 PRDM6Q9NQX0 595 aa11.55□□□□□ -0.56
COL12A1-209ENST00000493109 NID1P14543 1247 aa11.54□□□□□ -0.56
COL12A1-209ENST00000493109 POTEAQ6S8J7 498 aa11.54□□□□□ -0.56
COL12A1-209ENST00000493109 POM121Q96HA1 1249 aa11.54□□□□□ -0.56
COL12A1-209ENST00000493109 HSH2DQ96JZ2 352 aa11.54□□□□□ -0.56
COL12A1-209ENST00000493109 ZNF232Q9UNY5 417 aa11.54□□□□□ -0.56
COL12A1-209ENST00000493109 GPC6Q9Y625 555 aaPredicted RBP11.54□□□□□ -0.56
COL12A1-209ENST00000493109 SERTM1A2A2V5 107 aa11.53□□□□□ -0.56
COL12A1-209ENST00000493109 SPEM2Q0P670 501 aa11.53□□□□□ -0.56
COL12A1-209ENST00000493109 ADAMTS19Q8TE59 1207 aa11.53□□□□□ -0.56
COL12A1-209ENST00000493109 C20orf204Q6ZNR8 217 aa11.52□□□□□ -0.57
COL12A1-209ENST00000493109 RHPN1Q8TCX5 695 aa11.52□□□□□ -0.57
COL12A1-209ENST00000493109 TSPAN10Q9H1Z9 355 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-209ENST00000493109 ADH7P40394 386 aa11.51□□□□□ -0.57
COL12A1-209ENST00000493109 CLDN10P78369 228 aa11.51□□□□□ -0.57
COL12A1-209ENST00000493109 PRRT3Q5FWE3 981 aa11.51□□□□□ -0.57
COL12A1-209ENST00000493109 DYRK3O43781 588 aa11.5□□□□□ -0.57
COL12A1-209ENST00000493109 GRIK4Q16099 956 aa11.5□□□□□ -0.57
COL12A1-209ENST00000493109 ZNF280CQ8ND82 737 aa11.5□□□□□ -0.57
COL12A1-209ENST00000493109 TPCN2Q8NHX9 752 aa11.5□□□□□ -0.57
COL12A1-209ENST00000493109 KRTAP9-6A0A140TA67 174 aa11.49□□□□□ -0.57
COL12A1-209ENST00000493109 SPDYE3A6NKU9 549 aa11.49□□□□□ -0.57
COL12A1-209ENST00000493109 POM121CA8CG34 1229 aa11.49□□□□□ -0.57
COL12A1-209ENST00000493109 TYRO3Q06418 890 aa11.49□□□□□ -0.57
COL12A1-209ENST00000493109 BRD7Q9NPI1 651 aa11.49□□□□□ -0.57
COL12A1-209ENST00000493109 HIRAP54198 1017 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-209ENST00000493109 KCNQ4P56696 695 aa11.48□□□□□ -0.57
COL12A1-209ENST00000493109 UCN2Q96RP3 112 aa11.48□□□□□ -0.57
COL12A1-209ENST00000493109 PHACTR1Q9C0D0 580 aa11.48□□□□□ -0.57
COL12A1-209ENST00000493109 HCN4Q9Y3Q4 1203 aa11.48□□□□□ -0.57
COL12A1-209ENST00000493109 APBA3O96018 575 aa11.47□□□□□ -0.57
COL12A1-209ENST00000493109 PSMA6P60900 246 aaKnown RBP11.47□□□□□ -0.57
COL12A1-209ENST00000493109 C1orf53Q5VUE5 145 aa11.47□□□□□ -0.57
COL12A1-209ENST00000493109 CCDC102BQ68D86 513 aa11.46□□□□□ -0.57
COL12A1-209ENST00000493109 CEP63Q96MT8 703 aa11.46□□□□□ -0.57
COL12A1-209ENST00000493109 NEUROD4Q9HD90 331 aa11.46□□□□□ -0.57
COL12A1-209ENST00000493109 USP17L3A6NCW0 530 aa11.45□□□□□ -0.58
COL12A1-209ENST00000493109 USP17L4A6NCW7 530 aa11.45□□□□□ -0.58
COL12A1-209ENST00000493109 DKK1O94907 266 aa11.45□□□□□ -0.58
COL12A1-209ENST00000493109 USP17L2Q6R6M4 530 aa11.45□□□□□ -0.58
COL12A1-209ENST00000493109 USP17L1Q7RTZ2 530 aa11.45□□□□□ -0.58
COL12A1-209ENST00000493109 PLEKHM2Q8IWE5 1019 aa11.45□□□□□ -0.58
COL12A1-209ENST00000493109 SUSD3Q96L08 255 aa11.45□□□□□ -0.58
COL12A1-209ENST00000493109 SFI1A8K8P3 1242 aa11.44□□□□□ -0.58
COL12A1-209ENST00000493109 C21orf2O43822 256 aa11.44□□□□□ -0.58
COL12A1-209ENST00000493109 TRIM28Q13263 835 aaKnown RBP11.44□□□□□ -0.58
COL12A1-209ENST00000493109 TRIM50Q86XT4 487 aa11.44□□□□□ -0.58
COL12A1-209ENST00000493109 KCNH4Q9UQ05 1017 aa11.43□□□□□ -0.58
COL12A1-209ENST00000493109 SELPP16109 830 aa11.42□□□□□ -0.58
COL12A1-209ENST00000493109 PRSS36Q5K4E3 855 aa11.42□□□□□ -0.58
COL12A1-209ENST00000493109 TSEN2Q8NCE0 465 aaKnown RBP11.42□□□□□ -0.58
COL12A1-209ENST00000493109 ADGRE1Q14246 886 aa11.41□□□□□ -0.58
COL12A1-209ENST00000493109 BHMTQ93088 406 aa11.41□□□□□ -0.58
COL12A1-209ENST00000493109 M0R2N6 131 aa11.4□□□□□ -0.58
COL12A1-209ENST00000493109 MBTPS1Q14703 1052 aa11.4□□□□□ -0.58
COL12A1-209ENST00000493109 OGFOD1Q8N543 542 aa11.4□□□□□ -0.58
COL12A1-209ENST00000493109 NACC1Q96RE7 527 aa11.4□□□□□ -0.58
COL12A1-209ENST00000493109 ATP1A2P50993 1020 aa11.39□□□□□ -0.59
COL12A1-209ENST00000493109 ILDR2Q71H61 639 aa11.39□□□□□ -0.59
COL12A1-209ENST00000493109 SIX5Q8N196 739 aa11.39□□□□□ -0.59
COL12A1-209ENST00000493109 ANKIB1Q9P2G1 1089 aa11.39□□□□□ -0.59
COL12A1-209ENST00000493109 A0A0A0MRY4 1105 aa11.38□□□□□ -0.59
COL12A1-209ENST00000493109 SCO2A0A1W2PP80 73 aa11.38□□□□□ -0.59
COL12A1-209ENST00000493109 NEUROD1Q13562 356 aa11.38□□□□□ -0.59
COL12A1-209ENST00000493109 SHISA2Q6UWI4 295 aa11.38□□□□□ -0.59
COL12A1-209ENST00000493109 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
COL12A1-209ENST00000493109 SLC6A14Q9UN76 642 aa11.38□□□□□ -0.59
COL12A1-209ENST00000493109 LILRB5O75023 590 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms