RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 EYA1Q99502 592 aa8.88□□□□□ -0.99
HERC4-211ENST00000492996 ZC3H6P61129 1189 aaKnown RBP8.87□□□□□ -0.99
HERC4-211ENST00000492996 NFE2L2Q16236 605 aa8.87□□□□□ -0.99
HERC4-211ENST00000492996 PLEKHO1Q53GL0 409 aaPredicted RBP8.87□□□□□ -0.99
HERC4-211ENST00000492996 CLEC4GQ6UXB4 293 aa8.87□□□□□ -0.99
HERC4-211ENST00000492996 AEBP1Q8IUX7 1158 aa8.87□□□□□ -0.99
HERC4-211ENST00000492996 SYT17Q9BSW7 474 aa8.87□□□□□ -0.99
HERC4-211ENST00000492996 MAST2Q6P0Q8 1798 aa8.87□□□□□ -0.99
HERC4-211ENST00000492996 KCNA3P22001 575 aa8.86□□□□□ -0.99
HERC4-211ENST00000492996 ATF7IPQ6VMQ6 1270 aa8.86□□□□□ -0.99
HERC4-211ENST00000492996 TMEM57Q8N5G2 664 aa8.86□□□□□ -0.99
HERC4-211ENST00000492996 TSPYL6Q8N831 410 aa8.86□□□□□ -0.99
HERC4-211ENST00000492996 STYK1Q6J9G0 422 aa8.86□□□□□ -0.99
HERC4-211ENST00000492996 SULT6B1Q6IMI4 303 aa8.86□□□□□ -0.99
HERC4-211ENST00000492996 INTS5Q6P9B9 1019 aaKnown RBP8.86□□□□□ -0.99
HERC4-211ENST00000492996 L3MBTL3Q96JM7 780 aaPredicted RBP8.86□□□□□ -0.99
HERC4-211ENST00000492996 RWDD1Q9H446 243 aaPredicted RBP8.86□□□□□ -0.99
HERC4-211ENST00000492996 CACNA1SQ13698 1873 aa8.85□□□□□ -0.99
HERC4-211ENST00000492996 IL16Q14005 1332 aa8.85□□□□□ -0.99
HERC4-211ENST00000492996 SEC24BO95487 1268 aa8.85□□□□□ -0.99
HERC4-211ENST00000492996 HAP1P54257 671 aaPredicted RBP8.85□□□□□ -0.99
HERC4-211ENST00000492996 HSP90AB2PQ58FF8 381 aa8.85□□□□□ -0.99
HERC4-211ENST00000492996 CT47B1P0C2W7 299 aaPredicted RBP8.85□□□□□ -0.99
HERC4-211ENST00000492996 NUTM2GQ5VZR2 741 aa8.85□□□□□ -0.99
HERC4-211ENST00000492996 COL23A1Q86Y22 540 aaPredicted RBP8.85□□□□□ -0.99
HERC4-211ENST00000492996 NLGN1Q8N2Q7 840 aa8.85□□□□□ -0.99
HERC4-211ENST00000492996 LINC00116Q8NCU8 138 aa8.85□□□□□ -0.99
HERC4-211ENST00000492996 PIGBQ92521 554 aa8.85□□□□□ -0.99
HERC4-211ENST00000492996 SLC52A2Q9HAB3 445 aa8.85□□□□□ -0.99
HERC4-211ENST00000492996 R3HDM1Q15032 1099 aaKnown RBP8.84□□□□□ -0.99
HERC4-211ENST00000492996 MBIPQ9NS73 344 aa8.84□□□□□ -0.99
HERC4-211ENST00000492996 FOCADQ5VW36 1801 aa8.84□□□□□ -0.99
HERC4-211ENST00000492996 BRPF3Q9ULD4 1205 aa8.84□□□□□ -0.99
HERC4-211ENST00000492996 ERVV-1B6SEH8 477 aa8.83□□□□□ -1
HERC4-211ENST00000492996 IPO8O15397 1037 aaKnown RBP8.83□□□□□ -1
HERC4-211ENST00000492996 PDE4CQ08493 712 aa8.83□□□□□ -1
HERC4-211ENST00000492996 SOGA3Q5TF21 947 aa8.83□□□□□ -1
HERC4-211ENST00000492996 DDRGK1Q96HY6 314 aa8.83□□□□□ -1
HERC4-211ENST00000492996 HHIPL1Q96JK4 782 aa8.83□□□□□ -1
HERC4-211ENST00000492996 DDX19BQ9UMR2 479 aa8.83□□□□□ -1
HERC4-211ENST00000492996 POLD1P28340 1107 aa8.83□□□□□ -1
HERC4-211ENST00000492996 SLX4Q8IY92 1834 aa8.83□□□□□ -1
HERC4-211ENST00000492996 VAMP4O75379 141 aa8.82□□□□□ -1
HERC4-211ENST00000492996 CAPN2P17655 700 aa8.82□□□□□ -1
HERC4-211ENST00000492996 GNAI1P63096 354 aa8.82□□□□□ -1
HERC4-211ENST00000492996 KRT24Q2M2I5 525 aa8.82□□□□□ -1
HERC4-211ENST00000492996 LRP10Q7Z4F1 713 aa8.82□□□□□ -1
HERC4-211ENST00000492996 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
HERC4-211ENST00000492996 RTFDC1Q9BY42 306 aaPredicted RBP8.82□□□□□ -1
HERC4-211ENST00000492996 C1orf115Q9H7X2 142 aa8.82□□□□□ -1
HERC4-211ENST00000492996 NARFQ9UHQ1 456 aa8.82□□□□□ -1
HERC4-211ENST00000492996 KIF16BQ96L93 1317 aa8.82□□□□□ -1
HERC4-211ENST00000492996 MCM10Q7L590 875 aa8.82□□□□□ -1
HERC4-211ENST00000492996 C8orf58Q8NAV2 365 aa8.82□□□□□ -1
HERC4-211ENST00000492996 IL6STP40189 918 aaPredicted RBP8.82□□□□□ -1
HERC4-211ENST00000492996 TWISTNBQ3B726 338 aaPredicted RBP8.82□□□□□ -1
HERC4-211ENST00000492996 PGAP2Q9UHJ9 254 aa8.82□□□□□ -1
HERC4-211ENST00000492996 CARMIL3Q8ND23 1372 aa8.81□□□□□ -1
HERC4-211ENST00000492996 LOC102724428A0A0B4J2F2 783 aa8.81□□□□□ -1
HERC4-211ENST00000492996 RNMTO43148 476 aaKnown RBP8.81□□□□□ -1
HERC4-211ENST00000492996 CYP19A1P11511 503 aaPredicted RBP8.81□□□□□ -1
HERC4-211ENST00000492996 EIF5P55010 431 aaKnown RBP8.81□□□□□ -1
HERC4-211ENST00000492996 SIK1P57059 783 aa8.81□□□□□ -1
HERC4-211ENST00000492996 CALD1Q05682 793 aaKnown RBP8.81□□□□□ -1
HERC4-211ENST00000492996 SLC10A5Q5PT55 438 aa8.81□□□□□ -1
HERC4-211ENST00000492996 RAPGEF4Q8WZA2 1011 aa8.81□□□□□ -1
HERC4-211ENST00000492996 POLRMTO00411 1230 aaKnown RBP8.81□□□□□ -1
HERC4-211ENST00000492996 AAMPQ13685 434 aa8.81□□□□□ -1
HERC4-211ENST00000492996 CRY2Q49AN0 593 aa8.81□□□□□ -1
HERC4-211ENST00000492996 HOXA10P31260 410 aaPredicted RBP8.81□□□□□ -1
HERC4-211ENST00000492996 GAS2L2Q8NHY3 880 aa8.81□□□□□ -1
HERC4-211ENST00000492996 IFT57Q9NWB7 429 aa8.81□□□□□ -1
HERC4-211ENST00000492996 MIS18AQ9NYP9 233 aa8.81□□□□□ -1
HERC4-211ENST00000492996 IGSF3O75054 1194 aa8.8□□□□□ -1
HERC4-211ENST00000492996 ITPK1Q13572 414 aa8.8□□□□□ -1
HERC4-211ENST00000492996 ALDH1L2Q3SY69 923 aa8.8□□□□□ -1
HERC4-211ENST00000492996 C7orf43Q8WVR3 580 aa8.8□□□□□ -1
HERC4-211ENST00000492996 AK7Q96M32 723 aa8.8□□□□□ -1
HERC4-211ENST00000492996 UNCXA6NJT0 531 aa8.8□□□□□ -1
HERC4-211ENST00000492996 AMPHP49418 695 aa8.8□□□□□ -1
HERC4-211ENST00000492996 LMOD3Q0VAK6 560 aa8.8□□□□□ -1
HERC4-211ENST00000492996 LTV1Q96GA3 475 aaPredicted RBP8.8□□□□□ -1
HERC4-211ENST00000492996 CFAP44Q96MT7 982 aa8.8□□□□□ -1
HERC4-211ENST00000492996 STRN4Q9NRL3 753 aa8.8□□□□□ -1
HERC4-211ENST00000492996 ZBTB40Q9NUA8 1239 aa8.8□□□□□ -1
HERC4-211ENST00000492996 CCNL1Q9UK58 526 aaPredicted RBP8.8□□□□□ -1
HERC4-211ENST00000492996 GYS1P13807 737 aa8.79□□□□□ -1
HERC4-211ENST00000492996 CC2D2BQ6DHV5 1058 aa8.79□□□□□ -1
HERC4-211ENST00000492996 TMC4Q7Z404 712 aa8.79□□□□□ -1
HERC4-211ENST00000492996 MRPL50Q8N5N7 158 aaKnown RBP8.79□□□□□ -1
HERC4-211ENST00000492996 PTF1AQ7RTS3 328 aa8.79□□□□□ -1
HERC4-211ENST00000492996 LNPKQ9C0E8 428 aa8.79□□□□□ -1
HERC4-211ENST00000492996 ZNF853P0CG23 659 aa8.79□□□□□ -1
HERC4-211ENST00000492996 NOM1Q5C9Z4 860 aaKnown RBP8.79□□□□□ -1
HERC4-211ENST00000492996 ZBTB7CA1YPR0 619 aa8.78□□□□□ -1
HERC4-211ENST00000492996 KAT6BQ8WYB5 2073 aa8.78□□□□□ -1
HERC4-211ENST00000492996 CFHR5Q9BXR6 569 aa8.78□□□□□ -1
HERC4-211ENST00000492996 LOC285556D6RIA3 1793 aa8.77□□□□□ -1.01
HERC4-211ENST00000492996 HDAC1Q13547 482 aaPredicted RBP8.77□□□□□ -1.01
HERC4-211ENST00000492996 FHDC1Q9C0D6 1143 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 229.5 ms