RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NEURL1BA8MQ27 555 aa17.35■□□□□ 0.37
PTPN7-216ENST00000492977 CDC45O75419 566 aa17.35■□□□□ 0.37
PTPN7-216ENST00000492977 VSIG10Q8N0Z9 540 aa17.35■□□□□ 0.37
PTPN7-216ENST00000492977 PLBD2Q8NHP8 589 aa17.35■□□□□ 0.37
PTPN7-216ENST00000492977 OTUD7AQ8TE49 926 aaPredicted RBP17.35■□□□□ 0.37
PTPN7-216ENST00000492977 PIGBQ92521 554 aa17.35■□□□□ 0.37
PTPN7-216ENST00000492977 TEX13AQ9BXU3 409 aaPredicted RBP17.35■□□□□ 0.37
PTPN7-216ENST00000492977 PTCD1O75127 700 aaKnown RBP17.34■□□□□ 0.37
PTPN7-216ENST00000492977 SURF6O75683 361 aaKnown RBP17.34■□□□□ 0.37
PTPN7-216ENST00000492977 MFAP1P55081 439 aaKnown RBP17.34■□□□□ 0.37
PTPN7-216ENST00000492977 SPATA31A1Q5TZJ5 1347 aa17.34■□□□□ 0.37
PTPN7-216ENST00000492977 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
PTPN7-216ENST00000492977 DAXXQ9UER7 740 aaPredicted RBP17.34■□□□□ 0.37
PTPN7-216ENST00000492977 NWD2Q9ULI1 1742 aa17.33■□□□□ 0.37
PTPN7-216ENST00000492977 NBPF26B4DH59 902 aa17.33■□□□□ 0.37
PTPN7-216ENST00000492977 UBAP1LF5GYI3 381 aa17.33■□□□□ 0.37
PTPN7-216ENST00000492977 PDE1AP54750 535 aa17.33■□□□□ 0.37
PTPN7-216ENST00000492977 GCKRQ14397 625 aa17.33■□□□□ 0.37
PTPN7-216ENST00000492977 NBPF14Q5TI25 921 aa17.33■□□□□ 0.37
PTPN7-216ENST00000492977 NBPF10Q6P3W6 841 aaKnown RBP17.33■□□□□ 0.37
PTPN7-216ENST00000492977 TBC1D9Q6ZT07 1266 aa17.33■□□□□ 0.37
PTPN7-216ENST00000492977 NBPF15Q8N660 670 aa17.33■□□□□ 0.37
PTPN7-216ENST00000492977 MYD88Q99836 296 aa17.33■□□□□ 0.37
PTPN7-216ENST00000492977 ITGB4P16144 1822 aa17.33■□□□□ 0.36
PTPN7-216ENST00000492977 SALL3Q9BXA9 1300 aa17.32■□□□□ 0.36
PTPN7-216ENST00000492977 NUTM2BA6NNL0 878 aaPredicted RBP17.32■□□□□ 0.36
PTPN7-216ENST00000492977 NUTM2EB1AL46 878 aaPredicted RBP17.32■□□□□ 0.36
PTPN7-216ENST00000492977 NUTM2AQ8IVF1 878 aaPredicted RBP17.32■□□□□ 0.36
PTPN7-216ENST00000492977 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
PTPN7-216ENST00000492977 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
PTPN7-216ENST00000492977 KIF1BPQ96EK5 621 aa17.32■□□□□ 0.36
PTPN7-216ENST00000492977 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
PTPN7-216ENST00000492977 STAP2Q9UGK3 403 aa17.32■□□□□ 0.36
PTPN7-216ENST00000492977 BCL9O00512 1426 aa17.31■□□□□ 0.36
PTPN7-216ENST00000492977 ARFGEF2Q9Y6D5 1785 aa17.31■□□□□ 0.36
PTPN7-216ENST00000492977 RHPN1Q8TCX5 695 aa17.31■□□□□ 0.36
PTPN7-216ENST00000492977 SUCLG2Q96I99 432 aa17.31■□□□□ 0.36
PTPN7-216ENST00000492977 ATG3Q9NT62 314 aa17.31■□□□□ 0.36
PTPN7-216ENST00000492977 ASAP1Q9ULH1 1129 aa17.31■□□□□ 0.36
PTPN7-216ENST00000492977 SLIT2O94813 1529 aa17.31■□□□□ 0.36
PTPN7-216ENST00000492977 AOX1Q06278 1338 aa17.3■□□□□ 0.36
PTPN7-216ENST00000492977 SPATA31A5Q5VU36 1347 aa17.3■□□□□ 0.36
PTPN7-216ENST00000492977 SPATA31A7Q8IWB4 1347 aa17.3■□□□□ 0.36
PTPN7-216ENST00000492977 A1BGP04217 495 aa17.3■□□□□ 0.36
PTPN7-216ENST00000492977 MX1P20591 662 aa17.3■□□□□ 0.36
PTPN7-216ENST00000492977 KAZALD1Q96I82 304 aa17.3■□□□□ 0.36
PTPN7-216ENST00000492977 COL15A1P39059 1388 aa17.3■□□□□ 0.36
PTPN7-216ENST00000492977 SDSP20132 328 aa17.29■□□□□ 0.36
PTPN7-216ENST00000492977 RBM25P49756 843 aaKnown RBP17.29■□□□□ 0.36
PTPN7-216ENST00000492977 BECN1Q14457 450 aa17.29■□□□□ 0.36
PTPN7-216ENST00000492977 BARGINQ6ZT62 677 aa17.29■□□□□ 0.36
PTPN7-216ENST00000492977 DDB1Q16531 1140 aa17.28■□□□□ 0.36
PTPN7-216ENST00000492977 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
PTPN7-216ENST00000492977 ERC1Q8IUD2 1116 aa17.28■□□□□ 0.36
PTPN7-216ENST00000492977 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
PTPN7-216ENST00000492977 AFDNP55196 1824 aaKnown RBP17.28■□□□□ 0.36
PTPN7-216ENST00000492977 STARD3NLO95772 234 aa17.28■□□□□ 0.36
PTPN7-216ENST00000492977 JCADQ9P266 1359 aa17.27■□□□□ 0.36
PTPN7-216ENST00000492977 IFNLR1Q8IU57 520 aaPredicted RBP17.27■□□□□ 0.35
PTPN7-216ENST00000492977 NUP188Q5SRE5 1749 aa17.26■□□□□ 0.35
PTPN7-216ENST00000492977 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
PTPN7-216ENST00000492977 TTLL7Q6ZT98 887 aa17.26■□□□□ 0.35
PTPN7-216ENST00000492977 IL1RAPL2Q9NP60 686 aa17.26■□□□□ 0.35
PTPN7-216ENST00000492977 UNC5CLQ8IV45 518 aa17.25■□□□□ 0.35
PTPN7-216ENST00000492977 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
PTPN7-216ENST00000492977 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
PTPN7-216ENST00000492977 A0A087WZG4 1122 aa17.24■□□□□ 0.35
PTPN7-216ENST00000492977 ATP5J2-PTCD1G3V325 749 aa17.24■□□□□ 0.35
PTPN7-216ENST00000492977 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
PTPN7-216ENST00000492977 TUBGCP6Q96RT7 1819 aa17.24■□□□□ 0.35
PTPN7-216ENST00000492977 H7C1W4 665 aa17.23■□□□□ 0.35
PTPN7-216ENST00000492977 ABCB7O75027 752 aa17.23■□□□□ 0.35
PTPN7-216ENST00000492977 SLC4A3P48751 1232 aa17.23■□□□□ 0.35
PTPN7-216ENST00000492977 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
PTPN7-216ENST00000492977 C1QBPQ07021 282 aaKnown RBP17.23■□□□□ 0.35
PTPN7-216ENST00000492977 G3BP1Q13283 466 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPN7-216ENST00000492977 RABL6Q3YEC7 729 aaPredicted RBP17.23■□□□□ 0.35
PTPN7-216ENST00000492977 CLASRPQ8N2M8 674 aaKnown RBP17.23■□□□□ 0.35
PTPN7-216ENST00000492977 CCDC191Q8NCU4 936 aa17.23■□□□□ 0.35
PTPN7-216ENST00000492977 CWC25Q9NXE8 425 aaPredicted RBP17.23■□□□□ 0.35
PTPN7-216ENST00000492977 CCDC9Q9Y3X0 531 aaKnown RBP17.23■□□□□ 0.35
PTPN7-216ENST00000492977 CASP7P55210 303 aa17.23■□□□□ 0.35
PTPN7-216ENST00000492977 UBE3BQ7Z3V4 1068 aa17.23■□□□□ 0.35
PTPN7-216ENST00000492977 SYTL4Q96C24 671 aaPredicted RBP17.23■□□□□ 0.35
PTPN7-216ENST00000492977 USP42Q9H9J4 1324 aaKnown RBP17.22■□□□□ 0.35
PTPN7-216ENST00000492977 DOT1LQ8TEK3 1739 aa17.22■□□□□ 0.35
PTPN7-216ENST00000492977 EPHA10Q5JZY3 1008 aa17.22■□□□□ 0.35
PTPN7-216ENST00000492977 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
PTPN7-216ENST00000492977 MARCH10Q8NA82 808 aaPredicted RBP17.22■□□□□ 0.35
PTPN7-216ENST00000492977 PA2G4Q9UQ80 394 aaKnown RBP17.22■□□□□ 0.35
PTPN7-216ENST00000492977 TTC41PQ6P2S7 1318 aa17.22■□□□□ 0.35
PTPN7-216ENST00000492977 CYP19A1P11511 503 aaPredicted RBP17.21■□□□□ 0.35
PTPN7-216ENST00000492977 VPS72Q15906 364 aa17.21■□□□□ 0.35
PTPN7-216ENST00000492977 KIF6Q6ZMV9 814 aa17.21■□□□□ 0.35
PTPN7-216ENST00000492977 NGLY1Q96IV0 654 aa17.21■□□□□ 0.35
PTPN7-216ENST00000492977 ZBTB3Q9H5J0 574 aa17.21■□□□□ 0.35
PTPN7-216ENST00000492977 ZBTB12Q9Y330 459 aaPredicted RBP17.21■□□□□ 0.35
PTPN7-216ENST00000492977 SPATA31A6Q5VVP1 1343 aa17.21■□□□□ 0.35
PTPN7-216ENST00000492977 REC8O95072 547 aa17.2■□□□□ 0.34
PTPN7-216ENST00000492977 TRIM28Q13263 835 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms