RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 SYT17Q9BSW7 474 aa18.01■□□□□ 0.47
CCM2-217ENST00000492883 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
CCM2-217ENST00000492883 ERVV-1B6SEH8 477 aa18■□□□□ 0.47
CCM2-217ENST00000492883 DDR1Q08345 913 aa18■□□□□ 0.47
CCM2-217ENST00000492883 LRP10Q7Z4F1 713 aa18■□□□□ 0.47
CCM2-217ENST00000492883 XAGE3Q8WTP9 111 aa18■□□□□ 0.47
CCM2-217ENST00000492883 SETDB2Q96T68 719 aa18■□□□□ 0.47
CCM2-217ENST00000492883 ZBTB3Q9H5J0 574 aa18■□□□□ 0.47
CCM2-217ENST00000492883 MAP3K15Q6ZN16 1313 aa17.99■□□□□ 0.47
CCM2-217ENST00000492883 POLRMTO00411 1230 aaKnown RBP17.99■□□□□ 0.47
CCM2-217ENST00000492883 SLFN5Q08AF3 891 aa17.99■□□□□ 0.47
CCM2-217ENST00000492883 HLFQ16534 295 aa17.99■□□□□ 0.47
CCM2-217ENST00000492883 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
CCM2-217ENST00000492883 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
CCM2-217ENST00000492883 CD2APQ9Y5K6 639 aa17.99■□□□□ 0.47
CCM2-217ENST00000492883 TCERG1O14776 1098 aaKnown RBP17.98■□□□□ 0.47
CCM2-217ENST00000492883 RGL2O15211 777 aa17.98■□□□□ 0.47
CCM2-217ENST00000492883 VAMP4O75379 141 aa17.98■□□□□ 0.47
CCM2-217ENST00000492883 SERPINB2P05120 415 aa17.98■□□□□ 0.47
CCM2-217ENST00000492883 NPHP1O15259 732 aa17.97■□□□□ 0.47
CCM2-217ENST00000492883 NIP7Q9Y221 180 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCM2-217ENST00000492883 LAMB4A4D0S4 1761 aa17.95■□□□□ 0.46
CCM2-217ENST00000492883 SLC4A2P04920 1241 aa17.95■□□□□ 0.46
CCM2-217ENST00000492883 GIGYF2Q6Y7W6 1299 aaKnown RBP17.95■□□□□ 0.46
CCM2-217ENST00000492883 ANKRD13DQ6ZTN6 518 aa17.95■□□□□ 0.46
CCM2-217ENST00000492883 PHAXQ9H814 394 aaKnown RBP17.95■□□□□ 0.46
CCM2-217ENST00000492883 C4AP0C0L4 1744 aa17.95■□□□□ 0.46
CCM2-217ENST00000492883 NLGN2Q8NFZ4 835 aa17.94■□□□□ 0.46
CCM2-217ENST00000492883 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
CCM2-217ENST00000492883 CARMIL3Q8ND23 1372 aa17.93■□□□□ 0.46
CCM2-217ENST00000492883 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
CCM2-217ENST00000492883 FAM177BA6PVY3 158 aa17.93■□□□□ 0.46
CCM2-217ENST00000492883 GPTP24298 496 aa17.93■□□□□ 0.46
CCM2-217ENST00000492883 HSP90AB3PQ58FF7 597 aa17.93■□□□□ 0.46
CCM2-217ENST00000492883 RIC3Q7Z5B4 369 aa17.93■□□□□ 0.46
CCM2-217ENST00000492883 NBPF5PQ86XG9 351 aaPredicted RBP17.93■□□□□ 0.46
CCM2-217ENST00000492883 DDX58O95786 925 aaKnown RBP17.92■□□□□ 0.46
CCM2-217ENST00000492883 GTF2E1P29083 439 aaPredicted RBP17.92■□□□□ 0.46
CCM2-217ENST00000492883 TGFB2P61812 414 aa17.92■□□□□ 0.46
CCM2-217ENST00000492883 TPTE2Q6XPS3 522 aa17.92■□□□□ 0.46
CCM2-217ENST00000492883 TRMT2AQ8IZ69 625 aaKnown RBP17.92■□□□□ 0.46
CCM2-217ENST00000492883 CNBD1Q8NA66 436 aa17.92■□□□□ 0.46
CCM2-217ENST00000492883 TCIRG1Q13488 830 aa17.91■□□□□ 0.46
CCM2-217ENST00000492883 ZNF34Q8IZ26 560 aa17.91■□□□□ 0.46
CCM2-217ENST00000492883 CCDC24Q8N4L8 307 aa17.91■□□□□ 0.46
CCM2-217ENST00000492883 COL24A1Q17RW2 1714 aa17.9■□□□□ 0.46
CCM2-217ENST00000492883 ST5P78524 1137 aa17.9■□□□□ 0.46
CCM2-217ENST00000492883 PRR5LQ6MZQ0 368 aa17.9■□□□□ 0.46
CCM2-217ENST00000492883 A0A0G2JLW4 131 aa17.89■□□□□ 0.45
CCM2-217ENST00000492883 PARP10Q53GL7 1025 aa17.89■□□□□ 0.45
CCM2-217ENST00000492883 G2E3Q7L622 706 aa17.89■□□□□ 0.45
CCM2-217ENST00000492883 PPP1R42Q7Z4L9 355 aa17.89■□□□□ 0.45
CCM2-217ENST00000492883 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.45
CCM2-217ENST00000492883 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
CCM2-217ENST00000492883 DPEP1P16444 411 aa17.88■□□□□ 0.45
CCM2-217ENST00000492883 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
CCM2-217ENST00000492883 C10orf71Q711Q0 1435 aa17.88■□□□□ 0.45
CCM2-217ENST00000492883 ATP10DQ9P241 1426 aa17.88■□□□□ 0.45
CCM2-217ENST00000492883 PDE6BP35913 854 aa17.87■□□□□ 0.45
CCM2-217ENST00000492883 FLIIQ13045 1269 aa17.87■□□□□ 0.45
CCM2-217ENST00000492883 GPR162Q16538 588 aa17.87■□□□□ 0.45
CCM2-217ENST00000492883 KSR2Q6VAB6 950 aa17.87■□□□□ 0.45
CCM2-217ENST00000492883 BRIP1Q9BX63 1249 aa17.87■□□□□ 0.45
CCM2-217ENST00000492883 ZBED9Q6R2W3 1325 aa17.87■□□□□ 0.45
CCM2-217ENST00000492883 UBN2Q6ZU65 1347 aa17.87■□□□□ 0.45
CCM2-217ENST00000492883 SCN7AQ01118 1682 aa17.87■□□□□ 0.45
CCM2-217ENST00000492883 PI4KAP2A4QPH2 592 aa17.86■□□□□ 0.45
CCM2-217ENST00000492883 ATP5J2-PTCD1G3V325 749 aa17.86■□□□□ 0.45
CCM2-217ENST00000492883 CHRNA5P30532 468 aa17.86■□□□□ 0.45
CCM2-217ENST00000492883 FKBP5Q13451 457 aaPredicted RBP17.86■□□□□ 0.45
CCM2-217ENST00000492883 NUTM1Q86Y26 1132 aa17.86■□□□□ 0.45
CCM2-217ENST00000492883 PI4KAP1Q8N8J0 262 aa17.86■□□□□ 0.45
CCM2-217ENST00000492883 ZNF428Q96B54 188 aa17.86■□□□□ 0.45
CCM2-217ENST00000492883 UTP14AQ9BVJ6 771 aaKnown RBP17.86■□□□□ 0.45
CCM2-217ENST00000492883 WWC3Q9ULE0 1092 aa17.86■□□□□ 0.45
CCM2-217ENST00000492883 MAP3K2Q9Y2U5 619 aa17.86■□□□□ 0.45
CCM2-217ENST00000492883 H0YIN7 160 aa17.85■□□□□ 0.45
CCM2-217ENST00000492883 CT47B1P0C2W7 299 aaPredicted RBP17.85■□□□□ 0.45
CCM2-217ENST00000492883 NLRP10Q86W26 655 aa17.85■□□□□ 0.45
CCM2-217ENST00000492883 C2CD5Q86YS7 1000 aa17.85■□□□□ 0.45
CCM2-217ENST00000492883 MYD88Q99836 296 aa17.85■□□□□ 0.45
CCM2-217ENST00000492883 METTL22Q9BUU2 404 aaPredicted RBP17.85■□□□□ 0.45
CCM2-217ENST00000492883 ERFEQ4G0M1 354 aa17.84■□□□□ 0.45
CCM2-217ENST00000492883 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
CCM2-217ENST00000492883 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
CCM2-217ENST00000492883 PDZRN3Q9UPQ7 1066 aa17.84■□□□□ 0.45
CCM2-217ENST00000492883 NTSR2O95665 410 aa17.83■□□□□ 0.44
CCM2-217ENST00000492883 NEXNQ0ZGT2 675 aa17.83■□□□□ 0.44
CCM2-217ENST00000492883 SSH1Q8WYL5 1049 aa17.83■□□□□ 0.44
CCM2-217ENST00000492883 PIM2Q9P1W9 311 aa17.83■□□□□ 0.44
CCM2-217ENST00000492883 BCORQ6W2J9 1755 aa17.82■□□□□ 0.44
CCM2-217ENST00000492883 KCNA3P22001 575 aa17.82■□□□□ 0.44
CCM2-217ENST00000492883 TRIM28Q13263 835 aaKnown RBP17.82■□□□□ 0.44
CCM2-217ENST00000492883 ALDH1L2Q3SY69 923 aa17.82■□□□□ 0.44
CCM2-217ENST00000492883 MRPL50Q8N5N7 158 aaKnown RBP17.82■□□□□ 0.44
CCM2-217ENST00000492883 BCL2L13Q9BXK5 485 aa17.82■□□□□ 0.44
CCM2-217ENST00000492883 PXDNLA1KZ92 1463 aa17.82■□□□□ 0.44
CCM2-217ENST00000492883 DNAAF4Q8WXU2 420 aa17.81■□□□□ 0.44
CCM2-217ENST00000492883 ZNF622Q969S3 477 aaKnown RBP eCLIP17.81■□□□□ 0.44
CCM2-217ENST00000492883 SMC4Q9NTJ3 1288 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms