RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 TOGARAM1Q9Y4F4 1720 aa8.15□□□□□ -1.1
RBM39-237ENST00000492779 EIF2S2P20042 333 aaKnown RBP8.15□□□□□ -1.1
RBM39-237ENST00000492779 ZNF790Q6PG37 636 aa8.15□□□□□ -1.1
RBM39-237ENST00000492779 HSCBQ8IWL3 235 aa8.15□□□□□ -1.1
RBM39-237ENST00000492779 ATG3Q9NT62 314 aa8.15□□□□□ -1.1
RBM39-237ENST00000492779 TMOD3Q9NYL9 352 aa8.15□□□□□ -1.1
RBM39-237ENST00000492779 ZDHHC9Q9Y397 364 aa8.15□□□□□ -1.1
RBM39-237ENST00000492779 ABCC4O15439 1325 aa8.15□□□□□ -1.11
RBM39-237ENST00000492779 PKD1L3Q7Z443 1732 aa8.15□□□□□ -1.11
RBM39-237ENST00000492779 THSD7AQ9UPZ6 1657 aa8.14□□□□□ -1.11
RBM39-237ENST00000492779 MYCNP04198 464 aaPredicted RBP8.14□□□□□ -1.11
RBM39-237ENST00000492779 CLCN1P35523 988 aa8.14□□□□□ -1.11
RBM39-237ENST00000492779 CDCA7Q9BWT1 371 aaPredicted RBP8.14□□□□□ -1.11
RBM39-237ENST00000492779 USP16Q9Y5T5 823 aa8.14□□□□□ -1.11
RBM39-237ENST00000492779 PARP4Q9UKK3 1724 aaKnown RBP8.14□□□□□ -1.11
RBM39-237ENST00000492779 IL16Q14005 1332 aa8.14□□□□□ -1.11
RBM39-237ENST00000492779 ATP10DQ9P241 1426 aa8.14□□□□□ -1.11
RBM39-237ENST00000492779 CT47B1P0C2W7 299 aaPredicted RBP8.13□□□□□ -1.11
RBM39-237ENST00000492779 CDK11BP21127 795 aaKnown RBP8.13□□□□□ -1.11
RBM39-237ENST00000492779 EIF4A1P60842 406 aaKnown RBP8.13□□□□□ -1.11
RBM39-237ENST00000492779 ALDH1L2Q3SY69 923 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 L1TD1Q5T7N2 865 aaKnown RBP8.13□□□□□ -1.11
RBM39-237ENST00000492779 PIAS4Q8N2W9 510 aaPredicted RBP8.13□□□□□ -1.11
RBM39-237ENST00000492779 IFT57Q9NWB7 429 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 RBM27Q9P2N5 1060 aaKnown RBP8.13□□□□□ -1.11
RBM39-237ENST00000492779 RRP9O43818 475 aaKnown RBP8.13□□□□□ -1.11
RBM39-237ENST00000492779 GNAI1P63096 354 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 LMOD3Q0VAK6 560 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 PROSER3Q2NL68 480 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 TWISTNBQ3B726 338 aaPredicted RBP8.13□□□□□ -1.11
RBM39-237ENST00000492779 G2E3Q7L622 706 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 DEFB132Q7Z7B7 95 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 IL25Q9H293 177 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 KIF16BQ96L93 1317 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 WNK3Q9BYP7 1800 aa8.13□□□□□ -1.11
RBM39-237ENST00000492779 ERVV-2B6SEH9 535 aa8.12□□□□□ -1.11
RBM39-237ENST00000492779 HTATSF1O43719 755 aaKnown RBP8.12□□□□□ -1.11
RBM39-237ENST00000492779 PDE4CQ08493 712 aa8.12□□□□□ -1.11
RBM39-237ENST00000492779 NAP1L5Q96NT1 182 aaPredicted RBP8.12□□□□□ -1.11
RBM39-237ENST00000492779 MEIS3Q99687 375 aa8.12□□□□□ -1.11
RBM39-237ENST00000492779 BCL9O00512 1426 aa8.12□□□□□ -1.11
RBM39-237ENST00000492779 ESPNB1AK53 854 aa8.12□□□□□ -1.11
RBM39-237ENST00000492779 K7ELQ4 463 aaPredicted RBP8.12□□□□□ -1.11
RBM39-237ENST00000492779 BAG4O95429 457 aaKnown RBP8.12□□□□□ -1.11
RBM39-237ENST00000492779 HSP90AB1P08238 724 aaKnown RBP8.12□□□□□ -1.11
RBM39-237ENST00000492779 FOXD4L5Q5VV16 416 aaPredicted RBP8.12□□□□□ -1.11
RBM39-237ENST00000492779 DNAJC10Q8IXB1 793 aa8.12□□□□□ -1.11
RBM39-237ENST00000492779 PROM2Q8N271 834 aa8.12□□□□□ -1.11
RBM39-237ENST00000492779 FOXD4L4Q8WXT5 416 aaPredicted RBP8.12□□□□□ -1.11
RBM39-237ENST00000492779 LRRC4BQ9NT99 713 aa8.12□□□□□ -1.11
RBM39-237ENST00000492779 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.12□□□□□ -1.11
RBM39-237ENST00000492779 DOT1LQ8TEK3 1739 aa8.11□□□□□ -1.11
RBM39-237ENST00000492779 F6X3S4 739 aa8.11□□□□□ -1.11
RBM39-237ENST00000492779 GIGYF1O75420 1035 aaPredicted RBP8.11□□□□□ -1.11
RBM39-237ENST00000492779 A1BGP04217 495 aa8.11□□□□□ -1.11
RBM39-237ENST00000492779 MRE11P49959 708 aa8.11□□□□□ -1.11
RBM39-237ENST00000492779 RBM10P98175 930 aaKnown RBP8.11□□□□□ -1.11
RBM39-237ENST00000492779 ITPK1Q13572 414 aa8.11□□□□□ -1.11
RBM39-237ENST00000492779 USP26Q9BXU7 913 aa8.11□□□□□ -1.11
RBM39-237ENST00000492779 SCN11AQ9UI33 1791 aa8.11□□□□□ -1.11
RBM39-237ENST00000492779 ZNF330Q9Y3S2 320 aaPredicted RBP8.11□□□□□ -1.11
RBM39-237ENST00000492779 CYP2E1P05181 493 aaPredicted RBP8.11□□□□□ -1.11
RBM39-237ENST00000492779 EN1Q05925 392 aaPredicted RBP8.11□□□□□ -1.11
RBM39-237ENST00000492779 TTC5Q8N0Z6 440 aa8.11□□□□□ -1.11
RBM39-237ENST00000492779 GPT2Q8TD30 523 aa8.11□□□□□ -1.11
RBM39-237ENST00000492779 ITGB4P16144 1822 aa8.1□□□□□ -1.11
RBM39-237ENST00000492779 RGL2O15211 777 aa8.1□□□□□ -1.11
RBM39-237ENST00000492779 APBA3O96018 575 aa8.1□□□□□ -1.11
RBM39-237ENST00000492779 MYL6BP14649 208 aa8.1□□□□□ -1.11
RBM39-237ENST00000492779 SDSP20132 328 aa8.1□□□□□ -1.11
RBM39-237ENST00000492779 FAM196AQ6ZSG2 479 aa8.1□□□□□ -1.11
RBM39-237ENST00000492779 JARID2Q92833 1246 aaPredicted RBP8.1□□□□□ -1.11
RBM39-237ENST00000492779 RBSNQ9H1K0 784 aa8.1□□□□□ -1.11
RBM39-237ENST00000492779 DCTPP1Q9H773 170 aa8.1□□□□□ -1.11
RBM39-237ENST00000492779 PHAXQ9H814 394 aaKnown RBP8.1□□□□□ -1.11
RBM39-237ENST00000492779 IPO8O15397 1037 aaKnown RBP8.09□□□□□ -1.11
RBM39-237ENST00000492779 ATP6V1AP38606 617 aa8.09□□□□□ -1.11
RBM39-237ENST00000492779 TTC22Q5TAA0 569 aa8.09□□□□□ -1.11
RBM39-237ENST00000492779 LMBRD1Q9NUN5 540 aa8.09□□□□□ -1.11
RBM39-237ENST00000492779 CHPF2Q9P2E5 772 aa8.09□□□□□ -1.11
RBM39-237ENST00000492779 PALD1Q9ULE6 856 aa8.09□□□□□ -1.11
RBM39-237ENST00000492779 PALLDQ8WX93 1383 aa8.09□□□□□ -1.11
RBM39-237ENST00000492779 LOC102724428A0A0B4J2F2 783 aa8.09□□□□□ -1.11
RBM39-237ENST00000492779 PDIA4P13667 645 aaKnown RBP8.09□□□□□ -1.11
RBM39-237ENST00000492779 SIK1P57059 783 aa8.09□□□□□ -1.11
RBM39-237ENST00000492779 CEP85Q6P2H3 762 aa8.09□□□□□ -1.11
RBM39-237ENST00000492779 NBPF26B4DH59 902 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 AIMP1Q12904 312 aaKnown RBP8.08□□□□□ -1.12
RBM39-237ENST00000492779 EZH2Q15910 746 aaKnown RBP8.08□□□□□ -1.12
RBM39-237ENST00000492779 HDGFL1Q5TGJ6 251 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 NBPF14Q5TI25 921 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 MCTP1Q6DN14 999 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 NBPF10Q6P3W6 841 aaKnown RBP8.08□□□□□ -1.12
RBM39-237ENST00000492779 NBPF15Q8N660 670 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 CHMP4AQ9BY43 222 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 BCL11BQ9C0K0 894 aaPredicted RBP8.08□□□□□ -1.12
RBM39-237ENST00000492779 ADAMTS7Q9UKP4 1686 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 DDX11L8A8MPP1 907 aa8.08□□□□□ -1.12
RBM39-237ENST00000492779 CALD1Q05682 793 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms