RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 CAMTA2O94983 1202 aa14.82□□□□□ -0.04
SND1-215ENST00000492772 IL17REQ8NFR9 667 aa14.82□□□□□ -0.04
SND1-215ENST00000492772 CREBZFQ9NS37 354 aa14.82□□□□□ -0.04
SND1-215ENST00000492772 PRPF40BQ6NWY9 871 aaKnown RBP14.81□□□□□ -0.04
SND1-215ENST00000492772 CCDC24Q8N4L8 307 aa14.81□□□□□ -0.04
SND1-215ENST00000492772 MASTLQ96GX5 879 aa14.81□□□□□ -0.04
SND1-215ENST00000492772 IQCA1LA6NCM1 817 aa14.8□□□□□ -0.04
SND1-215ENST00000492772 SRGNP10124 158 aa14.8□□□□□ -0.04
SND1-215ENST00000492772 DZIP3Q86Y13 1208 aaKnown RBP14.8□□□□□ -0.04
SND1-215ENST00000492772 A1BGP04217 495 aa14.79□□□□□ -0.04
SND1-215ENST00000492772 ZNF652Q9Y2D9 606 aa14.79□□□□□ -0.04
SND1-215ENST00000492772 BTBD11A6QL63 1104 aa14.78□□□□□ -0.04
SND1-215ENST00000492772 DDNO94850 711 aaPredicted RBP14.78□□□□□ -0.04
SND1-215ENST00000492772 CCER1Q8TC90 406 aaPredicted RBP14.78□□□□□ -0.04
SND1-215ENST00000492772 L3MBTL3Q96JM7 780 aaPredicted RBP14.78□□□□□ -0.04
SND1-215ENST00000492772 CNTNAP1P78357 1384 aa14.77□□□□□ -0.04
SND1-215ENST00000492772 CCDC93Q567U6 631 aa14.77□□□□□ -0.05
SND1-215ENST00000492772 CLEC4GQ6UXB4 293 aa14.77□□□□□ -0.05
SND1-215ENST00000492772 LDHDQ86WU2 507 aa14.77□□□□□ -0.05
SND1-215ENST00000492772 NBPF5PQ86XG9 351 aaPredicted RBP14.77□□□□□ -0.05
SND1-215ENST00000492772 MKRN1Q9UHC7 482 aaKnown RBP14.77□□□□□ -0.05
SND1-215ENST00000492772 LAMB4A4D0S4 1761 aa14.77□□□□□ -0.05
SND1-215ENST00000492772 ADAMTSL1Q8N6G6 1762 aa14.76□□□□□ -0.05
SND1-215ENST00000492772 RGL2O15211 777 aa14.76□□□□□ -0.05
SND1-215ENST00000492772 POTEIP0CG38 1075 aa14.76□□□□□ -0.05
SND1-215ENST00000492772 POTEJP0CG39 1038 aa14.76□□□□□ -0.05
SND1-215ENST00000492772 NPR1P16066 1061 aa14.76□□□□□ -0.05
SND1-215ENST00000492772 PASKQ96RG2 1323 aa14.75□□□□□ -0.05
SND1-215ENST00000492772 PRKAR2BP31323 418 aa14.75□□□□□ -0.05
SND1-215ENST00000492772 CFAP53Q96M91 514 aa14.75□□□□□ -0.05
SND1-215ENST00000492772 KCNQ3O43525 872 aa14.74□□□□□ -0.05
SND1-215ENST00000492772 FKBP4Q02790 459 aaKnown RBP eCLIP14.74□□□□□ -0.05
SND1-215ENST00000492772 C7orf43Q8WVR3 580 aa14.74□□□□□ -0.05
SND1-215ENST00000492772 RSPH6AQ9H0K4 717 aa14.74□□□□□ -0.05
SND1-215ENST00000492772 TAF1DQ9H5J8 278 aaPredicted RBP14.74□□□□□ -0.05
SND1-215ENST00000492772 KLRG2A4D1S0 409 aaPredicted RBP14.73□□□□□ -0.05
SND1-215ENST00000492772 SNRPA1P09661 255 aaKnown RBP14.73□□□□□ -0.05
SND1-215ENST00000492772 TPTE2Q6XPS3 522 aa14.73□□□□□ -0.05
SND1-215ENST00000492772 RTF1Q92541 710 aaKnown RBP14.73□□□□□ -0.05
SND1-215ENST00000492772 PHACTR3Q96KR7 559 aa14.73□□□□□ -0.05
SND1-215ENST00000492772 USP16Q9Y5T5 823 aa14.73□□□□□ -0.05
SND1-215ENST00000492772 ZNF541Q9H0D2 1346 aa14.72□□□□□ -0.05
SND1-215ENST00000492772 TMEM88BA6NKF7 163 aa14.72□□□□□ -0.05
SND1-215ENST00000492772 PIP4K2AP48426 406 aaPredicted RBP14.72□□□□□ -0.05
SND1-215ENST00000492772 RTKN2Q8IZC4 609 aa14.72□□□□□ -0.05
SND1-215ENST00000492772 AIDAQ96BJ3 306 aa14.72□□□□□ -0.05
SND1-215ENST00000492772 HACL1Q9UJ83 578 aa14.72□□□□□ -0.05
SND1-215ENST00000492772 NIP7Q9Y221 180 aaKnown RBP eCLIP14.72□□□□□ -0.05
SND1-215ENST00000492772 FOXN1O15353 648 aa14.71□□□□□ -0.05
SND1-215ENST00000492772 EAPPQ56P03 285 aaPredicted RBP14.71□□□□□ -0.05
SND1-215ENST00000492772 PRDM10Q9NQV6 1147 aa14.71□□□□□ -0.05
SND1-215ENST00000492772 ZNF277Q9NRM2 450 aaPredicted RBP14.71□□□□□ -0.05
SND1-215ENST00000492772 NUDCQ9Y266 331 aa14.71□□□□□ -0.05
SND1-215ENST00000492772 PRAMEF22A3QJZ6 481 aa14.7□□□□□ -0.06
SND1-215ENST00000492772 ALDH1B1P30837 517 aa14.7□□□□□ -0.06
SND1-215ENST00000492772 CTCFP49711 727 aaPredicted RBP14.7□□□□□ -0.06
SND1-215ENST00000492772 CNGB1Q14028 1251 aaPredicted RBP14.7□□□□□ -0.06
SND1-215ENST00000492772 PNMA8AQ86V59 439 aaPredicted RBP14.7□□□□□ -0.06
SND1-215ENST00000492772 ITGBL1O95965 494 aaPredicted RBP14.69□□□□□ -0.06
SND1-215ENST00000492772 EPHX2P34913 555 aa14.69□□□□□ -0.06
SND1-215ENST00000492772 IARSP41252 1262 aaKnown RBP14.69□□□□□ -0.06
SND1-215ENST00000492772 MCM10Q7L590 875 aa14.69□□□□□ -0.06
SND1-215ENST00000492772 KDM3BQ7LBC6 1761 aa14.69□□□□□ -0.06
SND1-215ENST00000492772 RIC1Q4ADV7 1423 aa14.68□□□□□ -0.06
SND1-215ENST00000492772 SNED1Q8TER0 1413 aa14.68□□□□□ -0.06
SND1-215ENST00000492772 THSD7BQ9C0I4 1608 aa14.68□□□□□ -0.06
SND1-215ENST00000492772 NBPF26B4DH59 902 aa14.68□□□□□ -0.06
SND1-215ENST00000492772 FZD9O00144 591 aa14.68□□□□□ -0.06
SND1-215ENST00000492772 HTATSF1O43719 755 aaKnown RBP14.68□□□□□ -0.06
SND1-215ENST00000492772 VEGFBP49765 207 aa14.68□□□□□ -0.06
SND1-215ENST00000492772 NBPF10Q6P3W6 841 aaKnown RBP14.68□□□□□ -0.06
SND1-215ENST00000492772 GPC2Q8N158 579 aa14.68□□□□□ -0.06
SND1-215ENST00000492772 NBPF15Q8N660 670 aa14.68□□□□□ -0.06
SND1-215ENST00000492772 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
SND1-215ENST00000492772 NUP98P52948 1817 aa14.68□□□□□ -0.06
SND1-215ENST00000492772 RNF123Q5XPI4 1314 aa14.67□□□□□ -0.06
SND1-215ENST00000492772 U2AF1L5P0DN76 240 aaPredicted RBP14.67□□□□□ -0.06
SND1-215ENST00000492772 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
SND1-215ENST00000492772 U2AF1Q01081 240 aaKnown RBP eCLIP14.67□□□□□ -0.06
SND1-215ENST00000492772 OLFM4Q6UX06 510 aa14.67□□□□□ -0.06
SND1-215ENST00000492772 PSMD1Q99460 953 aa14.67□□□□□ -0.06
SND1-215ENST00000492772 NYXQ9GZU5 481 aa14.67□□□□□ -0.06
SND1-215ENST00000492772 IBTKQ9P2D0 1353 aaPredicted RBP14.67□□□□□ -0.06
SND1-215ENST00000492772 ABCC12Q96J65 1359 aa14.66□□□□□ -0.06
SND1-215ENST00000492772 RASSF10A6NK89 507 aa14.66□□□□□ -0.06
SND1-215ENST00000492772 FAM177BA6PVY3 158 aa14.66□□□□□ -0.06
SND1-215ENST00000492772 CRY2Q49AN0 593 aa14.66□□□□□ -0.06
SND1-215ENST00000492772 CC2D2BQ6DHV5 1058 aa14.66□□□□□ -0.06
SND1-215ENST00000492772 SYNE4Q8N205 404 aa14.66□□□□□ -0.06
SND1-215ENST00000492772 JDP2Q8WYK2 163 aa14.66□□□□□ -0.06
SND1-215ENST00000492772 DLG5Q8TDM6 1919 aa14.65□□□□□ -0.06
SND1-215ENST00000492772 HLFQ16534 295 aa14.65□□□□□ -0.06
SND1-215ENST00000492772 GRIPAP1Q4V328 841 aa14.65□□□□□ -0.06
SND1-215ENST00000492772 CNTROBQ8N137 903 aa14.65□□□□□ -0.06
SND1-215ENST00000492772 WBP1LQ9NX94 342 aa14.65□□□□□ -0.06
SND1-215ENST00000492772 LTBP1Q14766 1721 aa14.64□□□□□ -0.07
SND1-215ENST00000492772 ERVV-1B6SEH8 477 aa14.64□□□□□ -0.07
SND1-215ENST00000492772 DCTN1Q14203 1278 aa14.64□□□□□ -0.07
SND1-215ENST00000492772 TAF7Q15545 349 aaPredicted RBP14.64□□□□□ -0.07
SND1-215ENST00000492772 MAP1SQ66K74 1059 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms