RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 ZBTB3Q9H5J0 574 aa20.43■□□□□ 0.86
COPS3-210ENST00000492672 PTGER2P43116 358 aa20.41■□□□□ 0.86
COPS3-210ENST00000492672 SLC16A10Q8TF71 515 aa20.41■□□□□ 0.86
COPS3-210ENST00000492672 MTFR1LQ9H019 292 aa20.41■□□□□ 0.86
COPS3-210ENST00000492672 HYPKQ9NX55 129 aa20.41■□□□□ 0.86
COPS3-210ENST00000492672 AFDNP55196 1824 aaKnown RBP20.4■□□□□ 0.86
COPS3-210ENST00000492672 TBC1D9BQ66K14 1250 aa20.4■□□□□ 0.86
COPS3-210ENST00000492672 BICDL1Q6ZP65 573 aa20.4■□□□□ 0.86
COPS3-210ENST00000492672 NPM2Q86SE8 214 aaKnown RBP20.4■□□□□ 0.86
COPS3-210ENST00000492672 MRPL50Q8N5N7 158 aaKnown RBP20.4■□□□□ 0.86
COPS3-210ENST00000492672 ZNF428Q96B54 188 aa20.4■□□□□ 0.86
COPS3-210ENST00000492672 SGIP1Q9BQI5 828 aa20.4■□□□□ 0.86
COPS3-210ENST00000492672 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
COPS3-210ENST00000492672 ARFGEF2Q9Y6D5 1785 aa20.4■□□□□ 0.86
COPS3-210ENST00000492672 MAP3K15Q6ZN16 1313 aa20.39■□□□□ 0.85
COPS3-210ENST00000492672 TM4SF1P30408 202 aa20.38■□□□□ 0.85
COPS3-210ENST00000492672 DDR1Q08345 913 aa20.38■□□□□ 0.85
COPS3-210ENST00000492672 NFIXQ14938 502 aa20.38■□□□□ 0.85
COPS3-210ENST00000492672 ANKRD36CQ5JPF3 1778 aa20.37■□□□□ 0.85
COPS3-210ENST00000492672 KIF6Q6ZMV9 814 aa20.37■□□□□ 0.85
COPS3-210ENST00000492672 BCAR3O75815 825 aa20.36■□□□□ 0.85
COPS3-210ENST00000492672 MMP10P09238 476 aa20.36■□□□□ 0.85
COPS3-210ENST00000492672 RARSP54136 660 aaKnown RBP20.36■□□□□ 0.85
COPS3-210ENST00000492672 ANKRD13DQ6ZTN6 518 aa20.36■□□□□ 0.85
COPS3-210ENST00000492672 NLGN1Q8N2Q7 840 aa20.36■□□□□ 0.85
COPS3-210ENST00000492672 SPON1Q9HCB6 807 aa20.36■□□□□ 0.85
COPS3-210ENST00000492672 ERVV-1B6SEH8 477 aa20.35■□□□□ 0.85
COPS3-210ENST00000492672 GPTP24298 496 aa20.35■□□□□ 0.85
COPS3-210ENST00000492672 FLIIQ13045 1269 aa20.35■□□□□ 0.85
COPS3-210ENST00000492672 ADCY9O60503 1353 aa20.34■□□□□ 0.85
COPS3-210ENST00000492672 GIGYF2Q6Y7W6 1299 aaKnown RBP20.34■□□□□ 0.85
COPS3-210ENST00000492672 PLBD2Q8NHP8 589 aa20.34■□□□□ 0.85
COPS3-210ENST00000492672 PI4KAP2A4QPH2 592 aa20.33■□□□□ 0.85
COPS3-210ENST00000492672 FAM177BA6PVY3 158 aa20.33■□□□□ 0.85
COPS3-210ENST00000492672 F6X3S4 739 aa20.33■□□□□ 0.85
COPS3-210ENST00000492672 CCDC24Q8N4L8 307 aa20.33■□□□□ 0.85
COPS3-210ENST00000492672 PI4KAP1Q8N8J0 262 aa20.33■□□□□ 0.85
COPS3-210ENST00000492672 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.85
COPS3-210ENST00000492672 SMC4Q9NTJ3 1288 aa20.33■□□□□ 0.85
COPS3-210ENST00000492672 MAP3K2Q9Y2U5 619 aa20.33■□□□□ 0.85
COPS3-210ENST00000492672 ATP5J2-PTCD1G3V325 749 aa20.32■□□□□ 0.84
COPS3-210ENST00000492672 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
COPS3-210ENST00000492672 CT47B1P0C2W7 299 aaPredicted RBP20.32■□□□□ 0.84
COPS3-210ENST00000492672 ALDH1L2Q3SY69 923 aa20.32■□□□□ 0.84
COPS3-210ENST00000492672 CLEC4GQ6UXB4 293 aa20.32■□□□□ 0.84
COPS3-210ENST00000492672 RIC3Q7Z5B4 369 aa20.32■□□□□ 0.84
COPS3-210ENST00000492672 ZNF34Q8IZ26 560 aa20.32■□□□□ 0.84
COPS3-210ENST00000492672 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
COPS3-210ENST00000492672 UBN2Q6ZU65 1347 aa20.31■□□□□ 0.84
COPS3-210ENST00000492672 FKBP5Q13451 457 aaPredicted RBP20.31■□□□□ 0.84
COPS3-210ENST00000492672 KSR2Q6VAB6 950 aa20.31■□□□□ 0.84
COPS3-210ENST00000492672 TNNQ9UQP3 1299 aa20.31■□□□□ 0.84
COPS3-210ENST00000492672 NRXN2Q9P2S2 1712 aa20.3■□□□□ 0.84
COPS3-210ENST00000492672 TCIRG1Q13488 830 aa20.3■□□□□ 0.84
COPS3-210ENST00000492672 MYD88Q99836 296 aa20.3■□□□□ 0.84
COPS3-210ENST00000492672 NOB1Q9ULX3 412 aaKnown RBP20.3■□□□□ 0.84
COPS3-210ENST00000492672 LRP5O75197 1615 aa20.29■□□□□ 0.84
COPS3-210ENST00000492672 SERPINB2P05120 415 aa20.29■□□□□ 0.84
COPS3-210ENST00000492672 SETDB2Q96T68 719 aa20.29■□□□□ 0.84
COPS3-210ENST00000492672 ZNF652Q9Y2D9 606 aa20.29■□□□□ 0.84
COPS3-210ENST00000492672 POLD1P28340 1107 aa20.28■□□□□ 0.84
COPS3-210ENST00000492672 SUSD4Q5VX71 490 aa20.28■□□□□ 0.84
COPS3-210ENST00000492672 SYNE4Q8N205 404 aa20.28■□□□□ 0.84
COPS3-210ENST00000492672 METTL22Q9BUU2 404 aaPredicted RBP20.28■□□□□ 0.84
COPS3-210ENST00000492672 PARP3Q9Y6F1 533 aa20.28■□□□□ 0.84
COPS3-210ENST00000492672 ANKRD31Q8N7Z5 1873 aa20.28■□□□□ 0.84
COPS3-210ENST00000492672 ATP10DQ9P241 1426 aa20.27■□□□□ 0.84
COPS3-210ENST00000492672 DDX58O95786 925 aaKnown RBP20.27■□□□□ 0.84
COPS3-210ENST00000492672 IGKV5-2P06315 115 aa20.27■□□□□ 0.84
COPS3-210ENST00000492672 JARID2Q92833 1246 aaPredicted RBP20.27■□□□□ 0.84
COPS3-210ENST00000492672 ISCA1Q9BUE6 129 aa20.27■□□□□ 0.84
COPS3-210ENST00000492672 CARMIL3Q8ND23 1372 aa20.26■□□□□ 0.83
COPS3-210ENST00000492672 CWF19L2Q2TBE0 894 aaKnown RBP20.26■□□□□ 0.83
COPS3-210ENST00000492672 NLRP10Q86W26 655 aa20.26■□□□□ 0.83
COPS3-210ENST00000492672 NUTM1Q86Y26 1132 aa20.26■□□□□ 0.83
COPS3-210ENST00000492672 RGL2O15211 777 aa20.25■□□□□ 0.83
COPS3-210ENST00000492672 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
COPS3-210ENST00000492672 PRR5LQ6MZQ0 368 aa20.25■□□□□ 0.83
COPS3-210ENST00000492672 KLHL34Q8N239 644 aa20.25■□□□□ 0.83
COPS3-210ENST00000492672 DNAAF4Q8WXU2 420 aa20.25■□□□□ 0.83
COPS3-210ENST00000492672 PPP1R1BQ9UD71 204 aaPredicted RBP20.25■□□□□ 0.83
COPS3-210ENST00000492672 N4BP2Q86UW6 1770 aaPredicted RBP20.25■□□□□ 0.83
COPS3-210ENST00000492672 KIF13BQ9NQT8 1826 aa20.25■□□□□ 0.83
COPS3-210ENST00000492672 RTL5Q5HYW3 569 aaPredicted RBP20.24■□□□□ 0.83
COPS3-210ENST00000492672 FRAT1Q92837 279 aaPredicted RBP20.24■□□□□ 0.83
COPS3-210ENST00000492672 RCAN3Q9UKA8 241 aa20.24■□□□□ 0.83
COPS3-210ENST00000492672 NTSR2O95665 410 aa20.23■□□□□ 0.83
COPS3-210ENST00000492672 ERFEQ4G0M1 354 aa20.23■□□□□ 0.83
COPS3-210ENST00000492672 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
COPS3-210ENST00000492672 SLC4A10Q6U841 1118 aa20.23■□□□□ 0.83
COPS3-210ENST00000492672 NBPF5PQ86XG9 351 aaPredicted RBP20.23■□□□□ 0.83
COPS3-210ENST00000492672 FHDC1Q9C0D6 1143 aaPredicted RBP20.23■□□□□ 0.83
COPS3-210ENST00000492672 KIAA1551Q9HCM1 1747 aa20.23■□□□□ 0.83
COPS3-210ENST00000492672 BEND3Q5T5X7 828 aa20.22■□□□□ 0.83
COPS3-210ENST00000492672 NLGN2Q8NFZ4 835 aa20.21■□□□□ 0.83
COPS3-210ENST00000492672 TNRC6CQ9HCJ0 1690 aaKnown RBP20.21■□□□□ 0.83
COPS3-210ENST00000492672 PTPRCP08575 1304 aa20.21■□□□□ 0.83
COPS3-210ENST00000492672 LAMB2P55268 1798 aa20.21■□□□□ 0.83
COPS3-210ENST00000492672 ABCC12Q96J65 1359 aa20.21■□□□□ 0.83
COPS3-210ENST00000492672 DDX60Q8IY21 1712 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms