RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 LMBR1LQ6UX01 489 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 LDHAL6AQ6ZMR3 332 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 IQSEC3Q9UPP2 1182 aaPredicted RBP5.5□□□□□ -1.53
TRA2B-215ENST00000492417 OVOS2A0A0J9YW53 1432 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 OVOS2Q6IE36 1432 aa5.5□□□□□ -1.53
TRA2B-215ENST00000492417 RAD21O60216 631 aa5.49□□□□□ -1.53
TRA2B-215ENST00000492417 RBM5P52756 815 aaKnown RBP eCLIP5.49□□□□□ -1.53
TRA2B-215ENST00000492417 CNBD1Q8NA66 436 aa5.49□□□□□ -1.53
TRA2B-215ENST00000492417 UTP14AQ9BVJ6 771 aaKnown RBP5.49□□□□□ -1.53
TRA2B-215ENST00000492417 SMARCA5O60264 1052 aaPredicted RBP5.49□□□□□ -1.53
TRA2B-215ENST00000492417 NCLP19338 710 aaKnown RBP5.49□□□□□ -1.53
TRA2B-215ENST00000492417 PDE3AQ14432 1141 aa5.49□□□□□ -1.53
TRA2B-215ENST00000492417 EZH2Q15910 746 aaKnown RBP5.49□□□□□ -1.53
TRA2B-215ENST00000492417 MRPL50Q8N5N7 158 aaKnown RBP5.49□□□□□ -1.53
TRA2B-215ENST00000492417 IRS4O14654 1257 aaPredicted RBP5.49□□□□□ -1.53
TRA2B-215ENST00000492417 MFAP1P55081 439 aaKnown RBP5.49□□□□□ -1.53
TRA2B-215ENST00000492417 FKBP4Q02790 459 aaKnown RBP eCLIP5.49□□□□□ -1.53
TRA2B-215ENST00000492417 WASHC4Q2M389 1173 aa5.49□□□□□ -1.53
TRA2B-215ENST00000492417 SKAP1Q86WV1 359 aa5.49□□□□□ -1.53
TRA2B-215ENST00000492417 ABCF2Q9UG63 623 aa5.49□□□□□ -1.53
TRA2B-215ENST00000492417 NSFL1CQ9UNZ2 370 aaKnown RBP5.49□□□□□ -1.53
TRA2B-215ENST00000492417 ANKRD18BA2A2Z9 1011 aa5.48□□□□□ -1.53
TRA2B-215ENST00000492417 SAMD1Q6SPF0 538 aaPredicted RBP5.48□□□□□ -1.53
TRA2B-215ENST00000492417 PTF1AQ7RTS3 328 aa5.48□□□□□ -1.53
TRA2B-215ENST00000492417 STK11IPQ8N1F8 1099 aa5.48□□□□□ -1.53
TRA2B-215ENST00000492417 CCDC8Q9H0W5 538 aaPredicted RBP5.48□□□□□ -1.53
TRA2B-215ENST00000492417 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.48□□□□□ -1.53
TRA2B-215ENST00000492417 HSP90AB4PQ58FF6 505 aa5.48□□□□□ -1.53
TRA2B-215ENST00000492417 NOL8Q76FK4 1167 aaKnown RBP5.48□□□□□ -1.53
TRA2B-215ENST00000492417 AACSQ86V21 672 aa5.48□□□□□ -1.53
TRA2B-215ENST00000492417 PA2G4Q9UQ80 394 aaKnown RBP5.48□□□□□ -1.53
TRA2B-215ENST00000492417 JAG2Q9Y219 1238 aa5.48□□□□□ -1.53
TRA2B-215ENST00000492417 KIF24Q5T7B8 1368 aa5.48□□□□□ -1.53
TRA2B-215ENST00000492417 CDK12Q9NYV4 1490 aaPredicted RBP5.48□□□□□ -1.53
TRA2B-215ENST00000492417 ARHGEF28Q8N1W1 1705 aaKnown RBP5.48□□□□□ -1.53
TRA2B-215ENST00000492417 GOLGA6L22H0YM25 854 aa5.48□□□□□ -1.53
TRA2B-215ENST00000492417 GRM8O00222 908 aa5.48□□□□□ -1.53
TRA2B-215ENST00000492417 RLBP1P12271 317 aa5.48□□□□□ -1.53
TRA2B-215ENST00000492417 FNBP4Q8N3X1 1017 aaPredicted RBP5.48□□□□□ -1.53
TRA2B-215ENST00000492417 RIMBP2O15034 1052 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 PTMAP06454 111 aaKnown RBP5.47□□□□□ -1.53
TRA2B-215ENST00000492417 TTC39AQ5SRH9 613 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 KLHDC4Q8TBB5 520 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 NOL10Q9BSC4 688 aaKnown RBP5.47□□□□□ -1.53
TRA2B-215ENST00000492417 BCS1LQ9Y276 419 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 BARGINQ6ZT62 677 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 VSIG10Q8N0Z9 540 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 LINS1Q8NG48 757 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 SNRKQ9NRH2 765 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 PTPRCP08575 1304 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 CD163L1Q9NR16 1453 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 SPRYD3Q8NCJ5 442 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 PLBD2Q8NHP8 589 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 DIAPH3Q9NSV4 1193 aa5.47□□□□□ -1.53
TRA2B-215ENST00000492417 GPR162Q16538 588 aa5.46□□□□□ -1.53
TRA2B-215ENST00000492417 CCDC152Q4G0S7 254 aa5.46□□□□□ -1.53
TRA2B-215ENST00000492417 CCDC158Q5M9N0 1113 aa5.46□□□□□ -1.53
TRA2B-215ENST00000492417 ZNF594Q96JF6 807 aaPredicted RBP5.46□□□□□ -1.53
TRA2B-215ENST00000492417 CDC5LQ99459 802 aaKnown RBP5.46□□□□□ -1.53
TRA2B-215ENST00000492417 KIAA1210Q9ULL0 1709 aa5.46□□□□□ -1.53
TRA2B-215ENST00000492417 MMP10P09238 476 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 CENPQQ7L2Z9 268 aaPredicted RBP5.46□□□□□ -1.54
TRA2B-215ENST00000492417 ANKRD18AQ8IVF6 992 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 CHMP4CQ96CF2 233 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 FSD1Q9BTV5 496 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 PDZRN3Q9UPQ7 1066 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 MTMR7Q9Y216 660 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 SH3TC1Q8TE82 1336 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 F8W031 263 aaPredicted RBP5.46□□□□□ -1.54
TRA2B-215ENST00000492417 IDH1O75874 414 aaKnown RBP5.46□□□□□ -1.54
TRA2B-215ENST00000492417 NBPF7P0C2Y1 421 aaPredicted RBP5.46□□□□□ -1.54
TRA2B-215ENST00000492417 TSHZ3Q63HK5 1081 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 METTL22Q9BUU2 404 aaPredicted RBP5.46□□□□□ -1.54
TRA2B-215ENST00000492417 LRRCC1Q9C099 1032 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 CPDO75976 1380 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 L1TD1Q5T7N2 865 aaKnown RBP5.46□□□□□ -1.54
TRA2B-215ENST00000492417 NYXQ9GZU5 481 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 BOLA2Q9H3K6 86 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 RAI14Q9P0K7 980 aa5.46□□□□□ -1.54
TRA2B-215ENST00000492417 IQSEC2Q5JU85 1478 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 HLFQ16534 295 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 ARHGEF1Q92888 912 aaKnown RBP5.45□□□□□ -1.54
TRA2B-215ENST00000492417 TRIM34Q9BYJ4 488 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 GNL3LQ9NVN8 582 aaKnown RBP5.45□□□□□ -1.54
TRA2B-215ENST00000492417 HEG1Q9ULI3 1381 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 OVOS2A0A0G2JMS6 1433 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 H0YIN7 160 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 IFIT1P09914 478 aaKnown RBP5.45□□□□□ -1.54
TRA2B-215ENST00000492417 TCIRG1Q13488 830 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 RBM26Q5T8P6 1007 aaKnown RBP5.45□□□□□ -1.54
TRA2B-215ENST00000492417 RPAP2Q8IXW5 612 aaPredicted RBP5.45□□□□□ -1.54
TRA2B-215ENST00000492417 NLGN1Q8N2Q7 840 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 BICC1Q9H694 974 aaKnown RBP5.45□□□□□ -1.54
TRA2B-215ENST00000492417 LRP2BPQ9P2M1 347 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 ERC2O15083 957 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 SERPINB2P05120 415 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 ITPK1Q13572 414 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 SYNE4Q8N205 404 aa5.45□□□□□ -1.54
TRA2B-215ENST00000492417 TAF5LO75529 589 aa5.44□□□□□ -1.54
TRA2B-215ENST00000492417 IL6STP40189 918 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms