RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 ZNF784Q8NCA9 323 aaPredicted RBP32.24■■■□□ 2.75
UPF3A-209ENST00000492270 PIM2Q9P1W9 311 aa32.24■■■□□ 2.75
UPF3A-209ENST00000492270 ZNF652Q9Y2D9 606 aa32.24■■■□□ 2.75
UPF3A-209ENST00000492270 TTLL7Q6ZT98 887 aa32.23■■■□□ 2.75
UPF3A-209ENST00000492270 ERBB4Q15303 1308 aa32.23■■■□□ 2.75
UPF3A-209ENST00000492270 NECTIN2Q92692 538 aa32.22■■■□□ 2.75
UPF3A-209ENST00000492270 CFAP44Q96MT7 982 aa32.22■■■□□ 2.75
UPF3A-209ENST00000492270 PDIA6Q15084 440 aa32.21■■■□□ 2.75
UPF3A-209ENST00000492270 ANXA1P04083 346 aa32.2■■■□□ 2.75
UPF3A-209ENST00000492270 PROSER3Q2NL68 480 aa32.2■■■□□ 2.75
UPF3A-209ENST00000492270 CNBD1Q8NA66 436 aa32.2■■■□□ 2.75
UPF3A-209ENST00000492270 MBIPQ9NS73 344 aa32.2■■■□□ 2.75
UPF3A-209ENST00000492270 DALRD3Q5D0E6 543 aaKnown RBP32.19■■■□□ 2.74
UPF3A-209ENST00000492270 LRP10Q7Z4F1 713 aa32.19■■■□□ 2.74
UPF3A-209ENST00000492270 NIP7Q9Y221 180 aaKnown RBP eCLIP32.19■■■□□ 2.74
UPF3A-209ENST00000492270 MAP3K15Q6ZN16 1313 aa32.19■■■□□ 2.74
UPF3A-209ENST00000492270 ZNF853P0CG23 659 aa32.18■■■□□ 2.74
UPF3A-209ENST00000492270 C2CD5Q86YS7 1000 aa32.18■■■□□ 2.74
UPF3A-209ENST00000492270 ANKRD36CQ5JPF3 1778 aa32.17■■■□□ 2.74
UPF3A-209ENST00000492270 RGL2O15211 777 aa32.17■■■□□ 2.74
UPF3A-209ENST00000492270 KIF6Q6ZMV9 814 aa32.17■■■□□ 2.74
UPF3A-209ENST00000492270 ZBTB3Q9H5J0 574 aa32.17■■■□□ 2.74
UPF3A-209ENST00000492270 NPHP1O15259 732 aa32.16■■■□□ 2.74
UPF3A-209ENST00000492270 NBPF5PQ86XG9 351 aaPredicted RBP32.16■■■□□ 2.74
UPF3A-209ENST00000492270 BRIP1Q9BX63 1249 aa32.16■■■□□ 2.74
UPF3A-209ENST00000492270 ERVV-1B6SEH8 477 aa32.15■■■□□ 2.74
UPF3A-209ENST00000492270 IFT57Q9NWB7 429 aa32.15■■■□□ 2.74
UPF3A-209ENST00000492270 ARFGEF2Q9Y6D5 1785 aa32.14■■■□□ 2.74
UPF3A-209ENST00000492270 SBF1O95248 1867 aa32.14■■■□□ 2.74
UPF3A-209ENST00000492270 FAM177BA6PVY3 158 aa32.14■■■□□ 2.74
UPF3A-209ENST00000492270 H0YIN7 160 aa32.14■■■□□ 2.74
UPF3A-209ENST00000492270 ARHGAP27Q6ZUM4 889 aa32.14■■■□□ 2.74
UPF3A-209ENST00000492270 ADCY9O60503 1353 aa32.14■■■□□ 2.74
UPF3A-209ENST00000492270 TNRC6CQ9HCJ0 1690 aaKnown RBP32.14■■■□□ 2.74
UPF3A-209ENST00000492270 GNAI1P63096 354 aa32.13■■■□□ 2.73
UPF3A-209ENST00000492270 ST5P78524 1137 aa32.13■■■□□ 2.73
UPF3A-209ENST00000492270 ATP10DQ9P241 1426 aa32.13■■■□□ 2.73
UPF3A-209ENST00000492270 PDE6BP35913 854 aa32.12■■■□□ 2.73
UPF3A-209ENST00000492270 CALD1Q05682 793 aaKnown RBP32.12■■■□□ 2.73
UPF3A-209ENST00000492270 SLX4Q8IY92 1834 aa32.1■■■□□ 2.73
UPF3A-209ENST00000492270 HDGFL1Q5TGJ6 251 aa32.1■■■□□ 2.73
UPF3A-209ENST00000492270 DUSP27Q5VZP5 1158 aa32.1■■■□□ 2.73
UPF3A-209ENST00000492270 CHPF2Q9P2E5 772 aa32.1■■■□□ 2.73
UPF3A-209ENST00000492270 UBN2Q6ZU65 1347 aa32.09■■■□□ 2.73
UPF3A-209ENST00000492270 HOXB7P09629 217 aa32.09■■■□□ 2.73
UPF3A-209ENST00000492270 GPTP24298 496 aa32.09■■■□□ 2.73
UPF3A-209ENST00000492270 CCDC88AQ3V6T2 1871 aa32.09■■■□□ 2.73
UPF3A-209ENST00000492270 GIGYF2Q6Y7W6 1299 aaKnown RBP32.08■■■□□ 2.73
UPF3A-209ENST00000492270 TTLL6Q8N841 843 aa32.08■■■□□ 2.73
UPF3A-209ENST00000492270 DDX21Q9NR30 783 aaKnown RBP eCLIP32.08■■■□□ 2.73
UPF3A-209ENST00000492270 AIMP1Q12904 312 aaKnown RBP32.07■■■□□ 2.72
UPF3A-209ENST00000492270 CCDC27Q2M243 656 aa32.07■■■□□ 2.72
UPF3A-209ENST00000492270 TPTE2Q6XPS3 522 aa32.07■■■□□ 2.72
UPF3A-209ENST00000492270 COPS6Q7L5N1 327 aa32.07■■■□□ 2.72
UPF3A-209ENST00000492270 XAGE3Q8WTP9 111 aa32.07■■■□□ 2.72
UPF3A-209ENST00000492270 ZNF622Q969S3 477 aaKnown RBP eCLIP32.07■■■□□ 2.722e-6■■■■□ 19.4
UPF3A-209ENST00000492270 WWC1Q8IX03 1113 aa32.06■■■□□ 2.72
UPF3A-209ENST00000492270 FAM9BQ8IZU0 186 aa32.06■■■□□ 2.72
UPF3A-209ENST00000492270 PDZRN3Q9UPQ7 1066 aa32.05■■■□□ 2.72
UPF3A-209ENST00000492270 ABCC12Q96J65 1359 aa32.05■■■□□ 2.72
UPF3A-209ENST00000492270 ELL2O00472 640 aaPredicted RBP32.04■■■□□ 2.72
UPF3A-209ENST00000492270 ZNF34Q8IZ26 560 aa32.04■■■□□ 2.72
UPF3A-209ENST00000492270 FER1L6Q2WGJ9 1857 aa32.03■■■□□ 2.72
UPF3A-209ENST00000492270 SRGNP10124 158 aa32.03■■■□□ 2.72
UPF3A-209ENST00000492270 NUTM1Q86Y26 1132 aa32.03■■■□□ 2.72
UPF3A-209ENST00000492270 C8orf58Q8NAV2 365 aa32.03■■■□□ 2.72
UPF3A-209ENST00000492270 TSR2Q969E8 191 aaKnown RBP32.03■■■□□ 2.72
UPF3A-209ENST00000492270 SALL2Q9Y467 1007 aaPredicted RBP32.03■■■□□ 2.72
UPF3A-209ENST00000492270 GTF2E1P29083 439 aaPredicted RBP32.01■■■□□ 2.71
UPF3A-209ENST00000492270 SUSD4Q5VX71 490 aa32.01■■■□□ 2.71
UPF3A-209ENST00000492270 DBF4Q9UBU7 674 aaPredicted RBP32.01■■■□□ 2.71
UPF3A-209ENST00000492270 IBTKQ9P2D0 1353 aaPredicted RBP32■■■□□ 2.71
UPF3A-209ENST00000492270 RASSF7Q02833 373 aa32■■■□□ 2.71
UPF3A-209ENST00000492270 ERFEQ4G0M1 354 aa32■■■□□ 2.71
UPF3A-209ENST00000492270 NYXQ9GZU5 481 aa32■■■□□ 2.71
UPF3A-209ENST00000492270 ZNF219Q9P2Y4 722 aaPredicted RBP32■■■□□ 2.71
UPF3A-209ENST00000492270 STYK1Q6J9G0 422 aa31.99■■■□□ 2.71
UPF3A-209ENST00000492270 ZNF526Q8TF50 670 aaPredicted RBP31.99■■■□□ 2.71
UPF3A-209ENST00000492270 MASTLQ96GX5 879 aa31.99■■■□□ 2.71
UPF3A-209ENST00000492270 LAMB2P55268 1798 aa31.99■■■□□ 2.71
UPF3A-209ENST00000492270 KLRG2A4D1S0 409 aaPredicted RBP31.98■■■□□ 2.71
UPF3A-209ENST00000492270 NTSR2O95665 410 aa31.98■■■□□ 2.71
UPF3A-209ENST00000492270 C9orf131Q5VYM1 1079 aa31.98■■■□□ 2.71
UPF3A-209ENST00000492270 TIAM2Q8IVF5 1701 aa31.97■■■□□ 2.71
UPF3A-209ENST00000492270 NCBP3Q53F19 620 aaKnown RBP31.97■■■□□ 2.71
UPF3A-209ENST00000492270 TSPYL6Q8N831 410 aa31.97■■■□□ 2.71
UPF3A-209ENST00000492270 C21orf2O43822 256 aa31.96■■■□□ 2.71
UPF3A-209ENST00000492270 PRPF40BQ6NWY9 871 aaKnown RBP31.95■■■□□ 2.71
UPF3A-209ENST00000492270 CNKSR1Q969H4 720 aa31.95■■■□□ 2.71
UPF3A-209ENST00000492270 IL16Q14005 1332 aa31.95■■■□□ 2.7
UPF3A-209ENST00000492270 RIC1Q4ADV7 1423 aa31.94■■■□□ 2.7
UPF3A-209ENST00000492270 PARP10Q53GL7 1025 aa31.94■■■□□ 2.7
UPF3A-209ENST00000492270 HYPKQ9NX55 129 aa31.94■■■□□ 2.7
UPF3A-209ENST00000492270 DICER1Q9UPY3 1922 aaKnown RBP31.94■■■□□ 2.7
UPF3A-209ENST00000492270 NFKBIEO00221 500 aa31.93■■■□□ 2.7
UPF3A-209ENST00000492270 NPR1P16066 1061 aa31.93■■■□□ 2.7
UPF3A-209ENST00000492270 PRELPP51888 382 aa31.93■■■□□ 2.7
UPF3A-209ENST00000492270 RNF181Q9P0P0 153 aa31.93■■■□□ 2.7
UPF3A-209ENST00000492270 PPP1R42Q7Z4L9 355 aa31.92■■■□□ 2.7
UPF3A-209ENST00000492270 PHAXQ9H814 394 aaKnown RBP31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms